Homologs of PS417_11845 from Pseudomonas simiae WCS417

RpiR family transcriptional regulator
SEED: Predicted transcriptional regulator of the myo-inositol catabolic operon

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Pseudomonas simiae WCS417 PS417_11845 RpiR family transcriptional regulator strong 100 100
o Pseudomonas fluorescens SBW25 PFLU_RS12580 MurR/RpiR family transcriptional regulator strong 100 100
o Pseudomonas fluorescens SBW25-INTG PFLU_RS12580 MurR/RpiR family transcriptional regulator strong 100 100
o Pseudomonas orientalis W4I3 QF045_RS14570 MurR/RpiR family transcriptional regulator cofit 99 100
o Pseudomonas lactucae CFBP13502 GEMAOFIL_02650 HTH-type transcriptional regulator MurR cofit 99 100
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4273 Predicted transcriptional regulator of the myo-inositol catabolic operon sig. 95 100
o Pseudomonas fluorescens FW300-N2E3 AO353_21330 RpiR family transcriptional regulator sig. 94 100
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_510 Predicted transcriptional regulator of the myo-inositol catabolic operon strong 94 100
o Pseudomonas fluorescens FW300-N2C3 AO356_23155 RpiR family transcriptional regulator strong 94 100
o Pseudomonas sp. RS175 PFR28_02426 HTH-type transcriptional regulator MurR strong 93 100
o Pseudomonas syringae pv. syringae B728a Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) sig. 94 95
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3275 Helix-turn-helix protein RpiR:Sugar isomerase (SIS) insig. 94 95
o Pseudomonas sp. DMC3 GFF1723 HTH-type transcriptional regulator MurR cofit 82 100
o Paraburkholderia sabiae LMG 24235 QEN71_RS05080 MurR/RpiR family transcriptional regulator sig. 62 97
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04463 transcriptional regulator, RpiR family strong 62 94
o Paraburkholderia graminis OAS925 ABIE53_002944 DNA-binding MurR/RpiR family transcriptional regulator strong 61 94
o Burkholderia phytofirmans PsJN BPHYT_RS13890 RpiR family transcriptional regulator strong 61 94
o Herbaspirillum seropedicae SmR1 HSERO_RS12105 RpiR family transcriptional regulator strong 55 96
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS15395 MurR/RpiR family transcriptional regulator sig. 45 97
o Ralstonia solanacearum UW163 UW163_RS12855 MurR/RpiR family transcriptional regulator sig. 45 97
o Ralstonia solanacearum PSI07 RPSI07_RS17960 MurR/RpiR family transcriptional regulator insig. 44 97
o Ralstonia solanacearum GMI1000 RS_RS06260 MurR/RpiR family transcriptional regulator no data 43 90
o Serratia liquefaciens MT49 IAI46_24010 MurR/RpiR family transcriptional regulator strong 37 88
o Pectobacterium carotovorum WPP14 HER17_RS14445 MurR/RpiR family transcriptional regulator cofit 37 91
o Dickeya dadantii 3937 DDA3937_RS03665 MurR/RpiR family transcriptional regulator sig. 38 87
o Enterobacter sp. TBS_079 MPMX20_03376 HTH-type transcriptional regulator MurR strong 37 87
o Dickeya dianthicola 67-19 HGI48_RS03725 SIS domain-containing protein sig. 38 87
o Enterobacter asburiae PDN3 EX28DRAFT_0146 transcriptional regulator, RpiR family insig. 37 87
o Dickeya dianthicola ME23 DZA65_RS03850 MurR/RpiR family transcriptional regulator insig. 38 87
o Pantoea sp. MT58 IAI47_01475 MurR/RpiR family transcriptional regulator strong 38 86
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_06545 rpiR MurR/RpiR family transcriptional regulator sig. 36 85
o Erwinia tracheiphila SCR3 LU632_RS02360 MurR/RpiR family transcriptional regulator insig. 36 85
o Erwinia amylovora T8 OLJFJH_04440 MurR/RpiR family transcriptional regulator strong 38 88
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS17985 MurR/RpiR family transcriptional regulator strong 38 86
o Klebsiella pneumoniae MKP103 KDGMDA_11575 MurR/RpiR family transcriptional regulator sig. 35 86
o Klebsiella michiganensis M5al BWI76_RS03080 (Fe-S)-cluster assembly protein strong 35 86
o Caulobacter crescentus NA1000 CCNA_01355 transcriptional regulator IolR strong 39 85
o Caulobacter crescentus NA1000 Δfur CCNA_01355 transcriptional regulator IolR cofit 39 85
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF883 Predicted transcriptional regulator of the myo-inositol catabolic operon strong 36 86
o Agrobacterium fabrum C58 Atu4514 RpiR family transcriptional regulator strong 38 88
o Sinorhizobium meliloti 1021 SMc01164 hypothetical protein strong 30 90
  Serratia liquefaciens MT49 IAI46_12855 MurR/RpiR family transcriptional regulator insig. 32 95
o Rhizobium sp. OAE497 ABIE40_RS05995 MurR/RpiR family transcriptional regulator strong 30 91
o Pseudomonas segetis P6 ACVTMO_RS02120 MurR/RpiR family transcriptional regulator strong 31 83
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02617 transcriptional regulator, RpiR family insig. 29 88
  Paraburkholderia graminis OAS925 ABIE53_005821 DNA-binding MurR/RpiR family transcriptional regulator strong 28 94
  Burkholderia phytofirmans PsJN BPHYT_RS27175 DNA-binding protein insig. 29 94
o Cupriavidus basilensis FW507-4G11 RR42_RS26840 DNA-binding protein strong 26 88
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05904 transcriptional regulator, RpiR family no data 29 93
  Herbaspirillum seropedicae SmR1 HSERO_RS17585 DNA-binding protein no data 25 93
  Klebsiella michiganensis M5al BWI76_RS14460 MurR/RpiR family transcriptional regulator strong 29 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS10985 MurR/RpiR family transcriptional regulator insig. 26 93
  Ralstonia solanacearum PSI07 RPSI07_RS14095 MurR/RpiR family transcriptional regulator insig. 24 94
o Variovorax sp. SCN45 GFF6654 Transcriptional regulator, RpiR family insig. 24 86
  Ralstonia solanacearum GMI1000 RS_RS08795 MurR/RpiR family transcriptional regulator sig. 25 91
  Ralstonia solanacearum PSI07 RPSI07_RS17250 MurR/RpiR family transcriptional regulator insig. 28 82
o Castellaniella sp019104865 MT123 ABCV34_RS13380 MurR/RpiR family transcriptional regulator insig. 26 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS33775 MurR/RpiR family transcriptional regulator strong 25 91
  Ralstonia solanacearum GMI1000 RS_RS06905 MurR/RpiR family transcriptional regulator insig. 28 82
o Fusobacterium nucleatum SB010 HUW76_09985 MurR/RpiR family transcriptional regulator cofit 23 90
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_02611 transcriptional regulator, RpiR family strong 25 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS11695 MurR/RpiR family transcriptional regulator insig. 27 82
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS00230 MurR/RpiR family transcriptional regulator insig. 28 82
  Ralstonia solanacearum UW163 UW163_RS13560 MurR/RpiR family transcriptional regulator no data 28 82
  Variovorax sp. SCN45 GFF2758 Transcriptional regulator, RpiR family insig. 24 94
  Cupriavidus basilensis FW507-4G11 RR42_RS12005 transcriptional regulator insig. 27 86
  Herbaspirillum seropedicae SmR1 HSERO_RS17530 RpiR family transcriptional regulator strong 25 83
  Castellaniella sp019104865 MT123 ABCV34_RS13500 MurR/RpiR family transcriptional regulator insig. 27 90
  Ralstonia sp. UNC404CL21Col ABZR87_RS04920 MurR/RpiR family transcriptional regulator insig. 22 85
  Ralstonia solanacearum GMI1000 RS_RS00410 MurR/RpiR family transcriptional regulator insig. 24 76
  Ralstonia solanacearum PSI07 RPSI07_RS23545 MurR/RpiR family transcriptional regulator insig. 24 78
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS09825 MurR/RpiR family transcriptional regulator insig. 24 76
  Ralstonia solanacearum UW163 UW163_RS03755 MurR/RpiR family transcriptional regulator insig. 24 76
  Bifidobacterium breve UCC2003 BBR_RS13225 MurR/RpiR family transcriptional regulator sig. 28 86
o Phaeobacter inhibens DSM 17395 PGA1_262p02290 sugar isomerase-like protein sig. 25 87
  Paraburkholderia sabiae LMG 24235 QEN71_RS16875 MurR/RpiR family transcriptional regulator insig. 27 95
  Pseudomonas sp. S08-1 OH686_23395 hypothetical protein strong 26 82
  Sinorhizobium meliloti 1021 SM_b20276 transcriptional regulator insig. 22 86
  Rhizobium sp. OAE497 ABIE40_RS12055 MurR/RpiR family transcriptional regulator sig. 24 85
  Agrobacterium fabrum C58 Atu2145 transcriptional regulator, RpiR family sig. 24 85
  Herbaspirillum seropedicae SmR1 HSERO_RS09180 transcriptional regulator insig. 22 93
  Bosea sp. OAE506 ABIE41_RS16720 MurR/RpiR family transcriptional regulator insig. 25 85
  Variovorax sp. SCN45 GFF2285 Transcriptional regulator, RpiR family insig. 26 87
  Sinorhizobium meliloti 1021 SMc01602 hypothetical protein insig. 24 85
  Pseudomonas fluorescens FW300-N2E3 AO353_27995 RpiR family transcriptional regulator strong 24 93
  Phaeobacter inhibens DSM 17395 PGA1_c27130 putative HTH-type transcriptional regulator strong 22 89
  Variovorax sp. SCN45 GFF1217 Transcriptional regulator RpiR in protein degradation cluster insig. 25 86
  Variovorax sp. OAS795 ABID97_RS15420 MurR/RpiR family transcriptional regulator insig. 24 86
  Klebsiella michiganensis M5al BWI76_RS00065 MurR/RpiR family transcriptional regulator strong 23 81
  Burkholderia phytofirmans PsJN BPHYT_RS15550 transcriptional regulator sig. 26 85
  Erwinia tracheiphila HP pepo 2.2 IJEDHG_15575 hypothetical protein cofit 33 40
  Cupriavidus basilensis FW507-4G11 RR42_RS26180 hypothetical protein insig. 25 81
o Azospirillum sp. SherDot2 MPMX19_04002 HTH-type transcriptional regulator MurR insig. 23 89
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3305 Sialic acid utilization regulator, RpiR family insig. 24 80
o Pseudomonas fluorescens GW456-L13 PfGW456L13_3704 Transcriptional regulator RpiR in protein degradation cluster strong 23 93
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4395 Transcriptional regulator RpiR in protein degradation cluster no data 24 89
o Pseudomonas aeruginosa PA14 IKLFDK_25880 transcriptional repressor QapR strong 23 96
  Pectobacterium carotovorum WPP14 HER17_RS04535 MurR/RpiR family transcriptional regulator insig. 21 86
o Pseudomonas aeruginosa MRSN321 DY961_RS25830 qapR;inference=COORDINATES transcriptional repressor QapR strong 23 96
o Pseudomonas aeruginosa PUPa3 DQ20_RS58260 qapR;inference=COORDINATES transcriptional repressor QapR strong 23 96