| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Dechlorosoma suillum PS | Dsui_0331 | | PAS domain S-box | insig. | 100 | 100 |
| | Dechlorosoma suillum PS | Dsui_1715 | | response regulator with CheY-like receiver domain and winged-helix DNA-binding domain | cofit | 42 | 48 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_19505 | | two-component system sensor histidine kinase/response regulator | insig. | 32 | 49 |
| | Pseudomonas putida KT2440 | PP_4363 | | Sensor histidine kinase/response regulator | sig. | 33 | 52 |
| | Marinobacter adhaerens HP15 | HP15_2320 | | response regulator receiver protein | insig. | 34 | 46 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00130 | hsbR;inference=COORDINATES | two-component system response regulator HsbR | sig. | 38 | 45 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_17155 | | two-component system response regulator HsbR | sig. | 38 | 45 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40880 | hsbR;inference=COORDINATES | two-component system response regulator HsbR | insig. | 38 | 45 |
| | Pseudomonas sp. BP01 | JOY50_RS00655 | | fused response regulator/phosphatase | insig. | 32 | 51 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 35 | 47 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 35 | 47 |
| | Marinobacter adhaerens HP15 | HP15_1054 | | multi-sensor signal transduction histidine kinase | strong | 31 | 63 |
| | Pseudomonas stutzeri RCH2 | Psest_1725 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 46 | 28 |
| | Shewanella amazonensis SB2B | Sama_3110 | | putative integral membrane sensor protein (RefSeq) | insig. | 41 | 28 |
| | Pseudomonas sp. S08-1 | OH686_02805 | | Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW | cofit | 32 | 50 |
| | Marinobacter adhaerens HP15 | HP15_2320 | | response regulator receiver protein | insig. | 46 | 30 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_1098 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 31 | 60 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_1098 | | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 31 | 60 |
| | Pseudomonas sp. SVBP6 | COO64_RS21250 | | fused response regulator/phosphatase | insig. | 33 | 43 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18710 | | chemotaxis protein CheY | sig. | 29 | 52 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3610 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 29 | 52 |
| | Pseudomonas stutzeri RCH2 | Psest_1725 | | Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain | strong | 33 | 42 |
| | Pseudomonas sp. DMC3 | GFF2455 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 50 | 24 |
| | Azospirillum brasilense Sp245 | AZOBR_RS21875 | | histidine kinase | sig. | 43 | 29 |
| | Pseudomonas sp. RS175 | PFR28_00838 | | Sensor histidine kinase RcsC | sig. | 29 | 52 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2587 | | Serine phosphatase RsbU, regulator of sigma subunit | strong | 43 | 29 |
| | Pseudomonas sp. BP01 | JOY50_RS00655 | | fused response regulator/phosphatase | insig. | 48 | 26 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00130 | hsbR;inference=COORDINATES | two-component system response regulator HsbR | sig. | 47 | 25 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_17155 | | two-component system response regulator HsbR | sig. | 47 | 25 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS40880 | hsbR;inference=COORDINATES | two-component system response regulator HsbR | insig. | 47 | 25 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21745 | | fused response regulator/phosphatase | insig. | 32 | 47 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21745 | | fused response regulator/phosphatase | sig. | 32 | 47 |
| | Pseudomonas putida KT2440 | PP_4363 | | Sensor histidine kinase/response regulator | sig. | 49 | 26 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_18710 | | chemotaxis protein CheY | sig. | 46 | 26 |
| | Xanthobacter sp. DMC5 | GFF3782 | | Adaptive-response sensory-kinase SasA | insig. | 41 | 36 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04153 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 32 | 47 |
| | Shewanella sp. ANA-3 | Shewana3_2220 | | response regulator receiver protein (RefSeq) | insig. | 30 | 49 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03805 | | chemotaxis protein CheY | sig. | 43 | 29 |
| | Pseudomonas sp. SVBP6 | COO64_RS21250 | | fused response regulator/phosphatase | insig. | 44 | 28 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4347 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 43 | 28 |
| | Azospirillum sp. SherDot2 | MPMX19_01268 | | Sensor histidine kinase RcsC | insig. | 40 | 31 |
| | Rhodospirillum rubrum S1H | Rru_A3213 | | PAS/PAC Sensor Signal Transduction Histidine Kinase (NCBI) | insig. | 44 | 26 |
| | Pseudomonas orientalis W4I3 | QF045_RS21905 | | fused response regulator/phosphatase | cofit | 33 | 47 |
| | Pseudomonas sp. DMC3 | GFF2455 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 29 | 52 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03805 | | chemotaxis protein CheY | sig. | 29 | 52 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2587 | | Serine phosphatase RsbU, regulator of sigma subunit | strong | 29 | 53 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3610 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 46 | 24 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24035 | | ATPase | insig. | 42 | 27 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4347 | | Serine phosphatase RsbU, regulator of sigma subunit | insig. | 29 | 52 |
| | Azospirillum sp. SherDot2 | MPMX19_03017 | | Adaptive-response sensory-kinase SasA | insig. | 43 | 28 |
| | Pseudomonas sp. RS175 | PFR28_00838 | | Sensor histidine kinase RcsC | sig. | 42 | 28 |
| | Pseudomonas syringae pv. syringae B728a | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 44 | 26 |
| | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3451 | | Response regulator receiver:ATP-binding region, ATPase-like:Stage II sporulation E | insig. | 44 | 26 |
| | Azospirillum brasilense Sp245 | AZOBR_RS24035 | | ATPase | insig. | 38 | 33 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13915 | | PAS domain-containing sensor histidine kinase | strong | 34 | 32 |
| | Pseudomonas simiae WCS417 | PS417_19775 | | chemotaxis protein CheY | insig. | 31 | 47 |
| | Pseudomonas simiae WCS417 | PS417_19775 | | chemotaxis protein CheY | insig. | 46 | 24 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_3829 | | PAS domain S-box | insig. | 42 | 24 |
| | Sinorhizobium meliloti 1021 | SMa1229 | | FixL oxygen regulated histidine kinase | cofit | 40 | 30 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS08350 | | PleD family two-component system response regulator | insig. | 44 | 27 |
| | Rhizobium sp. OAE497 | ABIE40_RS02810 | | PAS domain S-box protein | cofit | 37 | 28 |
| | Alteromonas macleodii MIT1002 | MIT1002_01320 | | Alkaline phosphatase synthesis transcriptional regulatory protein PhoP | cofit | 28 | 47 |
| | Pseudomonas sp. S08-1 | OH686_02805 | | Serine phosphatase RsbU, regulator of sigma subunit / Serine-protein kinase RsbW | cofit | 46 | 25 |
| | Bosea sp. OAE506 | ABIE41_RS15485 | | PAS domain-containing sensor histidine kinase | insig. | 45 | 25 |
| | Caulobacter crescentus NA1000 | CCNA_00796 | | oxygen sensory histidine kinase FixL | strong | 45 | 24 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_00796 | | oxygen sensory histidine kinase FixL | insig. | 45 | 24 |
| | Sinorhizobium meliloti 1021 | SMa1142 | | FixL-related histidine kinase | insig. | 43 | 25 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_04153 | | Protein-glutamate methylesterase/protein-glutamine glutaminase | cofit | 39 | 28 |
| | Pseudomonas orientalis W4I3 | QF045_RS21905 | | fused response regulator/phosphatase | cofit | 39 | 29 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS21745 | | fused response regulator/phosphatase | insig. | 44 | 24 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21745 | | fused response regulator/phosphatase | sig. | 44 | 24 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS05185 | | response regulator | insig. | 47 | 23 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_13915 | | PAS domain-containing sensor histidine kinase | strong | 35 | 29 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS01345 | | PAS domain-containing sensor histidine kinase | insig. | 41 | 25 |
| | Pseudomonas orientalis W4I3 | QF045_RS16400 | | EAL domain-containing response regulator | insig. | 43 | 23 |
| | Azospirillum sp. SherDot2 | MPMX19_03017 | | Adaptive-response sensory-kinase SasA | insig. | 38 | 28 |
| | Shewanella oneidensis MR-1 | SO2119 | | response regulator (NCBI ptt file) | cofit | 30 | 47 |
| | Azospirillum brasilense Sp245 | AZOBR_RS32580 | | hypothetical protein | insig. | 44 | 23 |
| | Magnetospirillum magneticum AMB-1 | AMB_RS14350 | | PAS domain S-box protein | insig. | 35 | 32 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_4073 | | PAS domain S-box | insig. | 39 | 31 |
| | Rhizobium sp. OAE497 | ABIE40_RS26180 | | PAS domain S-box protein | insig. | 40 | 28 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS11370 | | response regulator transcription factor | no data | 45 | 24 |
| | Dechlorosoma suillum PS | Dsui_2486 | | diguanylate cyclase (GGDEF) domain-containing protein | cofit | 35 | 37 |
| | Sphingobium sp. HT1-2 | GFF2215 | | Two-component system sensor histidine kinase | cofit | 34 | 49 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS15265 | | EAL domain-containing response regulator | insig. | 43 | 23 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS15265 | | EAL domain-containing response regulator | insig. | 43 | 23 |
| | Bifidobacterium breve UCC2003 | BBR_RS17455 | | DNA-binding response regulator | strong | 43 | 22 |
| | Rhodopseudomonas palustris CGA009 | TX73_022005 | | PAS domain S-box protein | strong | 38 | 27 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03815 | | hybrid sensor histidine kinase/response regulator | cofit | 47 | 25 |
| | Sphingobium sp. HT1-2 | GFF3047 | | Two-component oxygen-sensor histidine kinase FixL | cofit | 38 | 26 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_13725 | | diguanylate cyclase | insig. | 34 | 38 |
| | Pseudomonas putida KT2440 | PP_4959 | | diguanylate cyclase | cofit | 34 | 38 |
| | Dechlorosoma suillum PS | Dsui_3334 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 31 | 48 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4666 | | Sensory box/GGDEF family protein | insig. | 33 | 39 |
| | Rhodopseudomonas palustris CGA009 | TX73_016195 | | PleD family two-component system response regulator | insig. | 43 | 23 |
| | Sphingobium sp. HT1-2 | GFF5391 | | Two-component oxygen-sensor histidine kinase FixL | cofit | 38 | 27 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS03320 | | EAL domain-containing protein | insig. | 27 | 51 |
| | Pseudomonas sp. S08-1 | OH686_00405 | | Methyl-accepting chemotaxis sensor/transducer protein | insig. | 38 | 28 |
| | Dechlorosoma suillum PS | Dsui_2125 | | PAS domain S-box | insig. | 30 | 55 |
| | Synechocystis sp000284455 PCC 6803 | SGL_RS08635 | | response regulator | sig. | 28 | 53 |