| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_05045 | | dipeptide/tripeptide permease DtpA | insig. | 100 | 100 |
| o | Enterobacter asburiae PDN3 | EX28DRAFT_1630 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | insig. | 60 | 94 |
| o | Enterobacter sp. TBS_079 | MPMX20_02004 | | Dipeptide and tripeptide permease A | sig. | 60 | 94 |
| o | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF3640 | | Di/tripeptide permease DtpA | insig. | 59 | 94 |
| o | Pantoea agglomerans CFBP13505 P0401 | PagCFBP13505_RS05630 | | dipeptide/tripeptide permease DtpA | cofit | 58 | 97 |
| o | Pectobacterium carotovorum WPP14 | HER17_RS10865 | | dipeptide/tripeptide permease DtpA | cofit | 57 | 95 |
| o | Pantoea sp. MT58 | IAI47_10500 | | dipeptide/tripeptide permease DtpA | strong | 58 | 97 |
| o | Klebsiella pneumoniae MKP103 | KDGMDA_23335 | | dipeptide/tripeptide permease DtpA | sig. | 58 | 95 |
| o | Klebsiella pneumoniae MRSN742743 | KFA93_RS13990 | dtpA;go_component=membrane|0016020||IEA;go_function=peptide | dipeptide/tripeptide permease DtpA | cofit | 58 | 95 |
| o | Escherichia coli ECRC101 | MCAODC_17895 | dtpA | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Escherichia coli BL21 | ECD_01604 | | dipeptide and tripeptide permease A | cofit | 59 | 93 |
| o | Escherichia coli BW25113 | b1634 | tppB | putative tripeptide transporter permease (NCBI) | strong | 59 | 93 |
| o | Escherichia coli ECOR27 | NOLOHH_18035 | dtpA | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Escherichia coli ECOR38 | HEPCGN_05900 | dtpA | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Escherichia coli ECRC100 | OKFHMN_27515 | dtpA | dipeptide/tripeptide permease DtpA | cofit | 59 | 93 |
| o | Escherichia coli ECRC102 | NIAGMN_00550 | dtpA | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Escherichia coli ECRC62 | BNILDI_16825 | dtpA | dipeptide/tripeptide permease DtpA | cofit | 59 | 93 |
| o | Escherichia coli ECRC98 | JDDGAC_02105 | dtpA | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Escherichia coli ECRC99 | KEDOAH_00590 | dtpA | dipeptide/tripeptide permease DtpA | no data | 59 | 93 |
| o | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_02091 | | Dipeptide and tripeptide permease A | sig. | 59 | 93 |
| o | Escherichia fergusonii Becca | EFB2_02358 | | Dipeptide and tripeptide permease A | insig. | 59 | 93 |
| o | Escherichia coli Nissle 1917 | ECOLIN_RS09120 | | dipeptide/tripeptide permease DtpA | insig. | 59 | 93 |
| o | Rahnella sp. WP5 | EX31_RS15730 | | dipeptide/tripeptide permease DtpA | insig. | 59 | 94 |
| o | Klebsiella michiganensis M5al | BWI76_RS16390 | | dipeptide/tripeptide permease A | sig. | 58 | 94 |
| o | Serratia liquefaciens MT49 | IAI46_11450 | | dipeptide/tripeptide permease DtpA | cofit | 60 | 94 |
| o | Erwinia amylovora T8 | OLJFJH_14410 | | dipeptide/tripeptide permease DtpA | insig. | 56 | 94 |
| | Escherichia coli ECOR38 | HEPCGN_15335 | dtpB | dipeptide/tripeptide permease DtpB | insig. | 48 | 94 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS19975 | | dipeptide/tripeptide permease DtpB | cofit | 48 | 94 |
| | Escherichia coli ECRC62 | BNILDI_03200 | dtpB | dipeptide/tripeptide permease DtpB | cofit | 48 | 94 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_00207 | | Dipeptide and tripeptide permease B | insig. | 48 | 94 |
| | Escherichia coli BW25113 | b3496 | yhiP | predicted transporter (NCBI) | sig. | 48 | 94 |
| | Escherichia coli BL21 | ECD_03345 | | dipeptide and tripeptide permease B | cofit | 48 | 94 |
| | Escherichia coli ECOR27 | NOLOHH_08360 | dtpB | dipeptide/tripeptide permease DtpB | insig. | 48 | 94 |
| | Escherichia coli ECRC100 | OKFHMN_16425 | dtpB | dipeptide/tripeptide permease DtpB | cofit | 48 | 94 |
| | Escherichia coli ECRC101 | MCAODC_06940 | dtpB | dipeptide/tripeptide permease DtpB | insig. | 48 | 94 |
| | Escherichia coli ECRC102 | NIAGMN_14190 | dtpB | dipeptide/tripeptide permease DtpB | insig. | 48 | 94 |
| | Escherichia coli ECRC98 | JDDGAC_20055 | dtpB | dipeptide/tripeptide permease DtpB | insig. | 48 | 94 |
| | Escherichia coli ECRC99 | KEDOAH_11720 | dtpB | dipeptide/tripeptide permease DtpB | no data | 48 | 94 |
| | Escherichia fergusonii Becca | EFB2_00319 | | Dipeptide and tripeptide permease B | cofit | 48 | 94 |
| | Klebsiella michiganensis M5al | BWI76_RS26585 | | MFS transporter | insig. | 49 | 92 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_07415 | | dipeptide/tripeptide permease DtpB | insig. | 49 | 92 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS09730 | dtpB;inference=COORDINATES | dipeptide/tripeptide permease DtpB | insig. | 49 | 92 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF519 | | Di/tripeptide permease DtpB | insig. | 49 | 91 |
| o | Paraburkholderia sabiae LMG 24235 | QEN71_RS18370 | | oligopeptide:H+ symporter | cofit | 42 | 93 |
| o | Rhodanobacter denitrificans MT42 | LRK55_RS03800 | | oligopeptide:H+ symporter | cofit | 40 | 93 |
| o | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS04030 | | oligopeptide:H+ symporter | strong | 40 | 93 |
| o | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS05875 | | oligopeptide:H+ symporter | insig. | 41 | 93 |
| o | Rhodanobacter sp. FW510-T8 | OKGIIK_10890 | pTR2 | MFS transporter | sig. | 41 | 92 |
| o | Shewanella amazonensis SB2B | Sama_1177 | | proton-dependent oligopeptide transporter (POT) family protein (RefSeq) | strong | 40 | 92 |
| o | Shewanella sp. ANA-3 | Shewana3_3089 | | amino acid/peptide transporter (RefSeq) | insig. | 39 | 93 |
| o | Shewanella oneidensis MR-1 | SO1277 | | proton-dependent oligopeptide transporter (POT) family protein (NCBI ptt file) | strong | 38 | 93 |
| o | Paraburkholderia graminis OAS925 | ABIE53_004167 | | POT family proton-dependent oligopeptide transporter | insig. | 40 | 88 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS22060 | | amino acid transporter | cofit | 40 | 89 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_03131 | | proton-dependent oligopeptide transporter, POT family | sig. | 40 | 88 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS17250 | | peptide MFS transporter | insig. | 32 | 93 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05620 | | peptide MFS transporter | insig. | 32 | 93 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05865 | | peptide MFS transporter | insig. | 32 | 93 |
| | Sphingobium sp. HT1-2 | GFF2309 | | Di-tripeptide/cation symporter | cofit | 29 | 92 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS18460 | | oligopeptide:H+ symporter | strong | 30 | 92 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS17245 | | peptide MFS transporter | insig. | 31 | 93 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS05615 | | peptide MFS transporter | insig. | 33 | 84 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05860 | | peptide MFS transporter | insig. | 33 | 84 |
| | Cellulophaga baltica 18 | M666_RS02435 | | oligopeptide:H+ symporter | sig. | 29 | 93 |
| | Sphingobium sp. HT1-2 | GFF1203 | | Di-tripeptide/cation symporter | cofit | 30 | 92 |
| | Shewanella amazonensis SB2B | Sama_2266 | | amino acid/peptide transporter (RefSeq) | strong | 29 | 95 |
| | Echinicola vietnamensis KMM 6221, DSM 17526 | Echvi_2958 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | strong | 28 | 93 |
| | Shewanella sp. ANA-3 | Shewana3_1373 | | amino acid/peptide transporter (RefSeq) | sig. | 30 | 94 |
| | Sphingomonas koreensis DSMZ 15582 | Ga0059261_1312 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | strong | 28 | 92 |
| | Shewanella loihica PV-4 | Shew_1397 | | amino acid/peptide transporter (RefSeq) | strong | 29 | 93 |
| | Klebsiella michiganensis M5al | BWI76_RS23635 | | MFS transporter | sig. | 30 | 82 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_15480 | | MFS transporter | insig. | 30 | 91 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS03130 | dtpD;go_component=membrane|0016020||IEA;go_function=peptide | dipeptide permease DtpD | insig. | 30 | 91 |
| | Acinetobacter baumannii LAC-4 | RR41_RS05640 | | peptide MFS transporter | insig. | 28 | 85 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_00765 | | Dihydroorotate dehydrogenase | insig. | 30 | 93 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06570 | | MFS transporter | sig. | 29 | 92 |
| | Enterobacter sp. TBS_079 | MPMX20_03388 | | Di-/tripeptide transporter | insig. | 29 | 94 |
| | Enterobacter asburiae PDN3 | EX28DRAFT_0134 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | insig. | 29 | 94 |
| | Serratia liquefaciens MT49 | IAI46_09660 | | peptide MFS transporter | insig. | 30 | 82 |
| | Rahnella sp. WP5 | EX31_RS01220 | | peptide MFS transporter | insig. | 28 | 94 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_04195 | | MFS transporter | insig. | 30 | 82 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS18105 | | peptide MFS transporter | insig. | 30 | 82 |
| | Escherichia coli ECOR27 | NOLOHH_04745 | dtpC | dipeptide/tripeptide permease DtpC | insig. | 30 | 90 |
| | Escherichia coli ECRC62 | BNILDI_06745 | dtpC | dipeptide/tripeptide permease DtpC | insig. | 30 | 90 |
| | Escherichia coli BL21 | ECD_04001 | | dipeptide and tripeptide permease | insig. | 30 | 90 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03913 | | Dipeptide and tripeptide permease C | insig. | 30 | 90 |
| | Escherichia coli BW25113 | b4130 | yjdL | predicted transporter (NCBI) | insig. | 30 | 90 |
| | Escherichia coli ECRC100 | OKFHMN_12480 | dtpC | dipeptide/tripeptide permease DtpC | cofit | 31 | 90 |
| | Escherichia coli ECRC101 | MCAODC_02990 | dtpC | dipeptide/tripeptide permease DtpC | insig. | 31 | 90 |
| | Escherichia coli ECRC102 | NIAGMN_10325 | dtpC | dipeptide/tripeptide permease DtpC | insig. | 31 | 90 |
| | Escherichia coli ECRC98 | JDDGAC_16115 | dtpC | dipeptide/tripeptide permease DtpC | insig. | 31 | 90 |
| | Escherichia coli ECRC99 | KEDOAH_15685 | dtpC | dipeptide/tripeptide permease DtpC | no data | 31 | 90 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23900 | | dipeptide/tripeptide permease DtpC | insig. | 30 | 90 |
| | Escherichia fergusonii Becca | EFB2_04452 | | Dipeptide and tripeptide permease C | insig. | 30 | 90 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_05220 | | amino acid/peptide transporter | insig. | 28 | 92 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_00770 | | Dihydroorotate dehydrogenase | insig. | 30 | 92 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.574.1 | | Di-/tripeptide transporter | strong | 32 | 83 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT4385 | | di-tripeptide ABC transporter (NCBI ptt file) | insig. | 28 | 92 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4613 | | Di/tripeptide permease YjdL | insig. | 28 | 88 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS06265 | | peptide MFS transporter | insig. | 28 | 93 |
| | Klebsiella michiganensis M5al | BWI76_RS08340 | | MFS transporter | insig. | 29 | 88 |
| | Alteromonas macleodii MIT1002 | MIT1002_00972 | | Di-/tripeptide transporter | insig. | 27 | 92 |
| | Lysobacter sp. OAE881 | ABIE51_RS04065 | | oligopeptide:H+ symporter | cofit | 31 | 92 |
| | Escherichia coli ECRC100 | OKFHMN_07015 | dtpD | dipeptide permease DtpD | insig. | 28 | 91 |
| | Escherichia coli ECRC101 | MCAODC_26235 | dtpD | dipeptide permease DtpD | insig. | 28 | 91 |
| | Escherichia coli ECRC102 | NIAGMN_05070 | dtpD | dipeptide permease DtpD | insig. | 28 | 91 |
| | Escherichia coli ECRC98 | JDDGAC_10670 | dtpD | dipeptide permease DtpD | insig. | 28 | 91 |
| | Escherichia coli ECRC99 | KEDOAH_20950 | dtpD | dipeptide permease DtpD | no data | 28 | 91 |
| | Klebsiella michiganensis M5al | BWI76_RS07200 | | MFS transporter | insig. | 28 | 89 |
| | Escherichia coli BL21 | ECD_00669 | | dipeptide and tripeptide permease D | insig. | 28 | 91 |
| | Escherichia coli ECOR27 | NOLOHH_23400 | dtpD | dipeptide permease DtpD | insig. | 29 | 88 |
| | Escherichia coli ECRC62 | BNILDI_21395 | dtpD | dipeptide permease DtpD | cofit | 29 | 88 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_03008 | | Dipeptide permease D | insig. | 29 | 88 |
| | Escherichia coli BW25113 | b0709 | ybgH | predicted transporter (NCBI) | insig. | 29 | 88 |
| | Klebsiella pneumoniae MRSN742743 | KFA93_RS01980 | dtpD;go_component=membrane|0016020||IEA;go_function=peptide | dipeptide permease DtpD | insig. | 28 | 92 |
| | Escherichia fergusonii Becca | EFB2_03394 | | Dipeptide permease D | insig. | 29 | 88 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS03795 | | dipeptide permease DtpD | insig. | 29 | 88 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_16660 | | Dipeptide permease D | insig. | 28 | 92 |
| | Escherichia coli ECOR38 | HEPCGN_01195 | dtpD | dipeptide permease DtpD | insig. | 29 | 88 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2453 | | Di/tripeptide permease YjdL | insig. | 30 | 89 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2164 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | strong | 29 | 73 |
| | Serratia liquefaciens MT49 | IAI46_20140 | | dipeptide permease DtpD | insig. | 29 | 89 |
| | Serratia liquefaciens MT49 | IAI46_09950 | | peptide MFS transporter | insig. | 27 | 88 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06575 | | MFS transporter | sig. | 30 | 83 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_05275 | | MFS transporter | strong | 25 | 94 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS10880 | | oligopeptide:H+ symporter | insig. | 29 | 75 |
| | Caulobacter crescentus NA1000 | CCNA_03524 | | di-/tripeptide transporter | strong | 26 | 93 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03524 | | di-/tripeptide transporter | cofit | 26 | 93 |
| | Rahnella sp. WP5 | EX31_RS17375 | | MFS transporter | insig. | 27 | 87 |
| | Shewanella oneidensis MR-1 | SO3194.1 | | hypothetical peptide transporter (NCBI ptt file) | strong | 28 | 63 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_03701 | | amino acid/peptide transporter | strong | 27 | 77 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0580 | | putative H+/peptide symporter (NCBI ptt file) | strong | 28 | 77 |
| | Lysobacter sp. OAE881 | ABIE51_RS15595 | | oligopeptide:H+ symporter | insig. | 26 | 61 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09950 | | peptide MFS transporter | insig. | 32 | 42 |
| | Vibrio cholerae E7946 ATCC 55056 | CSW01_17210 | | MFS transporter | insig. | 24 | 88 |
| | Escherichia coli ECOR38 | HEPCGN_11115 | pTR2 | Dipeptide/tripeptide permease | insig. | 29 | 78 |
| | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS15310 | | peptide MFS transporter | strong | 28 | 82 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS15175 | | peptide MFS transporter | strong | 27 | 81 |
| | Lysobacter sp. OAE881 | ABIE51_RS15075 | | peptide MFS transporter | insig. | 24 | 82 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06580 | | MFS transporter | sig. | 30 | 60 |
| | Shewanella oneidensis MR-1 | SO0002 | | proton/peptide symporter family protein (NCBI ptt file) | insig. | 28 | 81 |
| | Shewanella amazonensis SB2B | Sama_2411 | | proton/peptide symporter family protein (RefSeq) | insig. | 28 | 81 |
| | Shewanella sp. ANA-3 | Shewana3_0004 | | TGF-beta receptor, type I/II extracellular region (RefSeq) | insig. | 27 | 81 |
| | Sphingobium sp. HT1-2 | GFF3011 | | Di-tripeptide/cation symporter | insig. | 33 | 36 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15340 | | peptide MFS transporter | sig. | 29 | 59 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01725 | | peptide MFS transporter | strong | 29 | 59 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS01450 | | oligopeptide:H+ symporter | insig. | 24 | 81 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08000 | | POT family MFS transporter | strong | 26 | 82 |
| | Xanthomonas campestris pv. campestris strain 8004 | Xcc-8004.3517.1 | | Oligopeptide transporter | insig. | 24 | 81 |
| | Rhodanobacter denitrificans MT42 | LRK55_RS01255 | | oligopeptide:H+ symporter | insig. | 25 | 81 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS07715 | | oligopeptide:H+ symporter | insig. | 24 | 81 |
| | Kangiella aquimarina DSM 16071 | B158DRAFT_2164 | | amino acid/peptide transporter (Peptide:H+ symporter), bacterial | strong | 34 | 21 |
| | Phocaeicola dorei CL03T12C01 | ABI39_RS15340 | | peptide MFS transporter | sig. | 32 | 22 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS01725 | | peptide MFS transporter | strong | 32 | 22 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_05085 | pTR2 | MFS transporter | insig. | 25 | 74 |
| | Lysobacter sp. OAE881 | ABIE51_RS15595 | | oligopeptide:H+ symporter | insig. | 30 | 30 |
| | Pedobacter sp. GW460-11-11-14-LB5 | CA265_RS06580 | | MFS transporter | sig. | 29 | 25 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS08590 | | oligopeptide:H+ symporter | insig. | 28 | 34 |
| | Lysobacter sp. OAE881 | ABIE51_RS12745 | | oligopeptide:H+ symporter | insig. | 26 | 37 |
| | Shewanella oneidensis MR-1 | SO3195 | | hypothetical peptide transporter (NCBI ptt file) | strong | 32 | 27 |
| | Dyella japonica UNC79MFTsu3.2 | ABZR86_RS09950 | | peptide MFS transporter | insig. | 26 | 32 |
| | Shewanella loihica PV-4 | Shew_0597 | | major facilitator transporter (RefSeq) | insig. | 26 | 31 |
| | Bacteroides ovatus ATCC 8483 | BACOVA_02554 | | transporter, major facilitator family protein | insig. | 25 | 38 |
| | Bacteroides thetaiotaomicron VPI-5482 | BT0821 | | putative permease (NCBI ptt file) | sig. | 25 | 38 |
| | Rhodanobacter sp000427505 FW510-R12 | LRK53_RS08590 | | oligopeptide:H+ symporter | insig. | 29 | 21 |
| | Lysobacter sp. OAE881 | ABIE51_RS12745 | | oligopeptide:H+ symporter | insig. | 29 | 21 |
| | Bacteroides stercoris CC31F | HMPREF1181_RS14430 | | peptide MFS transporter | insig. | 24 | 31 |
| | Shewanella loihica PV-4 | Shew_2104 | | major facilitator transporter (RefSeq) | insig. | 24 | 39 |