Homologs of CSW01_00390 from Vibrio cholerae E7946 ATCC 55056

GGDEF domain-containing protein
SEED: Sensory box/GGDEF family protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Vibrio cholerae E7946 ATCC 55056 CSW01_00390 GGDEF domain-containing protein insig. 100 100
  Pseudomonas simiae WCS417 PS417_19145 membrane protein strong 43 62
  Pseudomonas fluorescens SBW25 PFLU_RS21140 EAL domain-containing protein cofit 43 62
  Pseudomonas fluorescens SBW25-INTG PFLU_RS21140 EAL domain-containing protein strong 43 62
  Pseudomonas sp. S08-1 OH686_21075 Sensory box/GGDEF family protein insig. 40 69
  Pseudomonas sp. DMC3 GFF4687 hypothetical protein cofit 44 57
  Pseudomonas aeruginosa PA14 IKLFDK_03805 PAS domain S-box protein insig. 39 69
  Pseudomonas aeruginosa PA14 IKLFDK_05475 diguanylate cyclase insig. 42 59
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2530 Sensory box/GGDEF family protein strong 43 59
  Pseudomonas fluorescens FW300-N2C3 AO356_03515 hypothetical protein cofit 43 59
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2166 Sensory box/GGDEF family protein insig. 44 57
  Pseudomonas sp. SVBP6 COO64_RS06790 EAL domain-containing protein cofit 42 59
  Pseudomonas sp. BP01 JOY50_RS16180 EAL domain-containing protein insig. 42 59
  Cupriavidus basilensis FW507-4G11 RR42_RS03995 diguanylate cyclase insig. 35 79
  Pseudomonas sp. RS175 PFR28_00896 hypothetical protein insig. 42 59
  Alteromonas macleodii MIT1002 MIT1002_00145 Cyclic di-GMP phosphodiesterase Gmr cofit 37 71
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_361 Sensory box/GGDEF family protein insig. 43 59
  Pseudomonas putida KT2440 PP_1761 diguanylate cyclase with phosphodiesterase domain strong 39 68
  Acidovorax sp. GW101-3H11 Ac3H11_2446 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 37 73
  Pseudomonas fluorescens FW300-N2E3 AO353_02120 hypothetical protein strong 43 57
  Acidovorax sp. GW101-3H11 Ac3H11_4120 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 58
  Shewanella amazonensis SB2B Sama_2973 GGDEF domain-containing protein (RefSeq) insig. 37 71
  Pseudomonas syringae pv. syringae B728a Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) cofit 41 59
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3655 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 41 59
  Shewanella oneidensis MR-1 SO0628 GGDEF domain protein (NCBI ptt file) insig. 37 72
  Shewanella sp. ANA-3 Shewana3_0620 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 37 72
  Bosea sp. OAE506 ABIE41_RS19250 EAL domain-containing protein insig. 35 73
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS02790 EAL domain-containing protein insig. 40 61
  Rhodanobacter denitrificans MT42 LRK55_RS09660 EAL domain-containing protein cofit 39 61
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS10020 EAL domain-containing protein insig. 39 61
  Methylophilus sp. DMC18 GFF887 hypothetical protein cofit 37 56
  Rhodanobacter sp. FW510-T8 OKGIIK_16275 Diguanylate cyclase insig. 41 57
  Shewanella oneidensis MR-1 SO0437 sensory box protein (NCBI ptt file) strong 38 58
  Shewanella sp. ANA-3 Shewana3_0436 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) strong 38 58
  Pseudomonas sp. S08-1 OH686_11905 hypothetical protein insig. 38 57
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.1842.1 Mlr3171 protein insig. 33 72
  Shewanella loihica PV-4 Shew_3416 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 34 68
  Dechlorosoma suillum PS Dsui_2894 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 56
  Shewanella loihica PV-4 Shew_3125 diguanylate cyclase/phosphodiesterase (RefSeq) insig. 37 58
  Shewanella amazonensis SB2B Sama_0388 putative diguanylate phosphodiesterase (RefSeq) strong 36 59
  Dechlorosoma suillum PS Dsui_0760 diguanylate cyclase (GGDEF) domain-containing protein cofit 38 57
  Rhodospirillum rubrum S1H Rru_A2763 Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) (NCBI) insig. 32 75
  Kangiella aquimarina DSM 16071 B158DRAFT_2394 diguanylate cyclase (GGDEF) domain strong 34 57
  Acidovorax sp. GW101-3H11 Ac3H11_903 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 34 57
  Dechlorosoma suillum PS Dsui_1011 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein insig. 31 88
  Desulfovibrio vulgaris Miyazaki F DvMF_0211 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) sig. 34 75
  Marinobacter adhaerens HP15 HP15_862 signal transduction protein containing a membrane domain, an EAL and a GGDEF domain insig. 33 58
  Pseudomonas fluorescens FW300-N2E3 AO353_07390 diguanylate cyclase insig. 31 79
  Pseudomonas sp. SVBP6 COO64_RS03000 EAL domain-containing protein insig. 31 74
  Pseudomonas simiae WCS417 PS417_24275 diguanylate phosphodiesterase strong 30 73
  Magnetospirillum magneticum AMB-1 AMB_RS18310 bifunctional diguanylate cyclase/phosphodiesterase cofit 27 88
  Pseudomonas fluorescens SBW25 PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase cofit 30 73
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26190 bifunctional diguanylate cyclase/phosphodiesterase sig. 30 73
  Pseudomonas fluorescens FW300-N2E3 AO353_14025 diguanylate phosphodiesterase strong 30 70
  Shewanella oneidensis MR-1 SO0427 sensory box protein (NCBI ptt file) sig. 29 74
  Pseudomonas sp. DMC3 GFF3964 hypothetical protein insig. 30 70
  Shewanella sp. ANA-3 Shewana3_0429 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 29 73
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2779 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 30 70
  Desulfovibrio vulgaris Hildenborough JW710 DVU1414 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 35 60
  Serratia liquefaciens MT49 IAI46_18940 diguanylate cyclase insig. 27 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5083 Serine hydroxymethyltransferase (EC 2.1.2.1) sig. 30 70
  Pseudomonas fluorescens FW300-N2C3 AO356_15730 diguanylate phosphodiesterase insig. 30 70
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1452 Serine hydroxymethyltransferase (EC 2.1.2.1) insig. 30 70
  Pseudomonas sp. BP01 JOY50_RS24630 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 70
  Pseudomonas sp. RS175 PFR28_03785 hypothetical protein insig. 32 61
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_2512 sensory box/GGDEF domain/EAL domain protein insig. 30 79
  Pseudomonas aeruginosa PA14 IKLFDK_00505 cyclic di-GMP receptor MorA insig. 30 72
  Pseudomonas putida KT2440 PP_0672 Sensory box protein sig. 30 70
  Pseudomonas sp. DMC3 GFF52 hypothetical protein insig. 31 78
  Pseudomonas syringae pv. syringae B728a Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 31 70
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4265 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 31 70
  Shewanella loihica PV-4 Shew_3428 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) insig. 30 75
  Paraburkholderia sabiae LMG 24235 QEN71_RS35965 EAL domain-containing protein strong 28 77
  Marinobacter adhaerens HP15 HP15_1500 sensory box/GGDEF family protein insig. 31 70
  Shewanella loihica PV-4 Shew_0979 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) insig. 29 74
  Dechlorosoma suillum PS Dsui_1564 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 28 88
  Marinobacter adhaerens HP15 HP15_4115 sensory box/GGDEF/EAL family protein cofit 29 87
  Pseudomonas sp. S08-1 OH686_08910 Phytochrome-like protein / Cph2 cofit 32 76
  Dechlorosoma suillum PS Dsui_3108 PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein cofit 29 88
  Pseudomonas aeruginosa PA14 IKLFDK_22535 bifunctional diguanylate cyclase/phosphodiesterase cofit 30 75
  Synechococcus elongatus PCC 7942 Synpcc7942_1859 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) insig. 30 76
  Marinobacter adhaerens HP15 HP15_68 sensory box/FOG: EAL domain/GGDEF domain containing protein insig. 30 74
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_4790 sensory box/GGDEF domain/EAL domain protein sig. 31 77
  Kangiella aquimarina DSM 16071 B158DRAFT_0463 PAS domain S-box/diguanylate cyclase (GGDEF) domain insig. 30 71
  Vibrio cholerae E7946 ATCC 55056 CSW01_03440 bifunctional diguanylate cyclase/phosphodiesterase insig. 31 68
  Cupriavidus basilensis FW507-4G11 RR42_RS11565 diguanylate cyclase insig. 30 69
  Pseudomonas fluorescens FW300-N2E3 AO353_11530 diguanylate cyclase strong 30 79
  Synechococcus elongatus PCC 7942 Synpcc7942_1158 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) insig. 31 67
  Pseudomonas fluorescens FW300-N2C3 AO356_14260 diguanylate cyclase insig. 31 75
  Shewanella oneidensis MR-1 SO0341 sensory box protein (NCBI ptt file) insig. 29 77
  Pseudomonas simiae WCS417 PS417_25885 diguanylate cyclase insig. 30 76
  Marinobacter adhaerens HP15 HP15_3980 diguanylate cyclase/phosphodiesterase insig. 31 70
  Pseudomonas fluorescens SBW25 PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 75
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27540 bifunctional diguanylate cyclase/phosphodiesterase insig. 30 75
  Ralstonia solanacearum GMI1000 RS_RS18985 GGDEF domain-containing protein insig. 32 69
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS21640 GGDEF domain-containing protein insig. 32 69
  Ralstonia solanacearum UW163 UW163_RS17545 GGDEF domain-containing protein insig. 32 69
  Marinobacter adhaerens HP15 HP15_3312 diguanylate cyclase/phosphodiesterase cofit 31 58
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1185 sensory box/GGDEF domain/EAL domain protein insig. 29 79
  Desulfovibrio vulgaris Hildenborough JW710 DVU2432 sensory box/GGDEF domain/EAL domain protein (TIGR) insig. 34 56