| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| | Klebsiella michiganensis M5al | BWI76_RS10325 | | AraC family transcriptional regulator | insig. | 100 | 100 |
| o | Serratia liquefaciens MT49 | IAI46_16505 | | AraC family transcriptional regulator | insig. | 77 | 96 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3361 | | Transcriptional regulator, AraC family | insig. | 25 | 92 |
| | Pseudomonas sp. DMC3 | GFF1007 | | HTH-type transcriptional activator RhaR | cofit | 27 | 92 |
| o | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08470 | | AraC family transcriptional regulator | cofit | 25 | 86 |
| | Agrobacterium fabrum C58 | Atu4659 | | AraC family transcriptional regulator | strong | 29 | 82 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4577 | | Transcriptional regulator, AraC family | insig. | 26 | 92 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02682 | | HTH-type transcriptional activator RhaR | cofit | 27 | 84 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_23420 | | AraC family transcriptional regulator | insig. | 25 | 92 |
| | Sinorhizobium meliloti 1021 | SM_b21649 | | AraC family transcriptional regulator | strong | 27 | 82 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_24435 | | AraC family transcriptional regulator | insig. | 27 | 92 |
| | Pseudomonas segetis P6 | MPMX49_01729 | | Arabinose operon regulatory protein | insig. | 27 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS10660 | | AraC family transcriptional regulator | insig. | 27 | 86 |
| | Cellulophaga baltica 18 | M666_RS09555 | | helix-turn-helix domain-containing protein | insig. | 31 | 53 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS02405 | | AraC family transcriptional regulator | insig. | 27 | 87 |
| | Pseudomonas simiae WCS417 | PS417_15905 | | AraC family transcriptional regulator | insig. | 25 | 84 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_02291 | | AraC-type DNA-binding protein | insig. | 27 | 92 |
| | Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS08755 | | AraC family transcriptional regulator | cofit | 23 | 84 |
| | Pseudomonas putida KT2440 | PP_2383 | | Transcriptional regulator, AraC family | sig. | 27 | 86 |
| | Pseudomonas sp. BP01 | JOY50_RS24410 | | AraC family transcriptional regulator | insig. | 28 | 89 |
| o | Bacteroides thetaiotaomicron VPI-5482 | BT2910 | | transcriptional regulator (NCBI ptt file) | insig. | 22 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_14820 | | AraC family transcriptional regulator | insig. | 27 | 87 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS33185 | | AraC family transcriptional regulator | insig. | 27 | 87 |
| | Pseudomonas orientalis W4I3 | QF045_RS14720 | | AraC family transcriptional regulator | insig. | 25 | 84 |
| | Pseudomonas lactucae CFBP13502 | GEMAOFIL_02770 | | HTH-type transcriptional activator RhaS | cofit | 27 | 87 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS17720 | | AraC family transcriptional regulator | insig. | 25 | 84 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS17720 | | AraC family transcriptional regulator | insig. | 25 | 84 |
| | Paraburkholderia graminis OAS925 | ABIE53_000371 | | AraC-like DNA-binding protein | insig. | 25 | 92 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_575 | | Transcriptional regulator, AraC family | insig. | 27 | 92 |
| | Pseudomonas orientalis W4I3 | QF045_RS17305 | | AraC family transcriptional regulator | cofit | 28 | 87 |
| | Pseudomonas sp. RS175 | PFR28_02366 | | HTH-type transcriptional activator RhaS | insig. | 26 | 92 |
| | Sinorhizobium meliloti 1021 | SM_b20859 | | AraC family transcriptional regulator | insig. | 32 | 36 |
| | Rhodopseudomonas palustris CGA009 | TX73_006775 | | AraC family transcriptional regulator | insig. | 38 | 33 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS15150 | mmsR;inference=COORDINATES | MmsAB operon transcriptional regulator MmsR | insig. | 25 | 87 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_18230 | | MmsAB operon transcriptional regulator MmsR | insig. | 25 | 87 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS42005 | mmsR;inference=COORDINATES | MmsAB operon transcriptional regulator MmsR | sig. | 25 | 87 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS10415 | | AraC family transcriptional regulator | no data | 35 | 35 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS34765 | | AraC family transcriptional regulator | insig. | 26 | 56 |
| o | Parabacteroides merdae CL09T00C40 | HMPREF1078_RS01750 | | AraC family transcriptional regulator | insig. | 24 | 85 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_13545 | | AraC family transcriptional regulator | sig. | 26 | 56 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS06030 | | AraC family transcriptional regulator | insig. | 33 | 44 |
| | Sinorhizobium meliloti 1021 | SMa0319 | | AraC family transcriptional regulator | insig. | 29 | 51 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS00165 | | AraC family transcriptional regulator | insig. | 24 | 92 |
| | Pseudomonas segetis P6 | MPMX49_01384 | | HTH-type transcriptional activator Btr | insig. | 23 | 86 |
| | Ralstonia solanacearum PSI07 | RPSI07_RS05325 | | AraC family transcriptional regulator | insig. | 28 | 51 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS03730 | | AraC family transcriptional regulator | insig. | 26 | 56 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_988 | | FIG229276: Transcriptional regulator, AraC family | insig. | 24 | 86 |
| | Rhizobium sp. OAE497 | ABIE40_RS22540 | | AraC family transcriptional regulator | strong | 23 | 82 |
| | Pseudomonas putida KT2440 | PP_3439 | | Transcriptional regulator, AraC family | insig. | 25 | 94 |
| | Pseudomonas sp. SVBP6 | COO64_RS07890 | | AraC family transcriptional regulator | no data | 24 | 86 |
| | Pseudomonas stutzeri RCH2 | Psest_1369 | | AraC-type DNA-binding domain-containing proteins | insig. | 23 | 86 |
| | Ralstonia sp. UNC404CL21Col | ABZR87_RS19200 | | AraC family transcriptional regulator | insig. | 28 | 49 |
| | Pseudomonas sp. S08-1 | OH686_19610 | | Transcriptional regulator, AraC family | insig. | 25 | 86 |
| | Sinorhizobium meliloti 1021 | SMa1822 | | hypothetical protein | insig. | 27 | 70 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2318 | | FIG229276: Transcriptional regulator, AraC family | insig. | 23 | 86 |
| | Pseudomonas sp. S08-1 | OH686_02580 | | hypothetical protein | insig. | 36 | 35 |
| | Ralstonia solanacearum IBSBF1503 | RALBFv3_RS18275 | | AraC family transcriptional regulator | insig. | 28 | 51 |
| | Ralstonia solanacearum UW163 | UW163_RS20855 | | AraC family transcriptional regulator | insig. | 28 | 51 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS13270 | | AraC family transcriptional regulator | insig. | 26 | 87 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS13270 | | AraC family transcriptional regulator | insig. | 26 | 87 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_04870 | | AraC family transcriptional regulator | strong | 25 | 84 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_16915 | | AraC family transcriptional regulator | sig. | 22 | 86 |
| | Ralstonia solanacearum GMI1000 | RS_RS22710 | | AraC family transcriptional regulator | insig. | 27 | 51 |
| | Acinetobacter baumannii LAC-4 | RR41_RS12375 | | AraC family transcriptional regulator | sig. | 34 | 43 |
| | Pseudomonas sp. DMC3 | GFF1069 | | HTH-type transcriptional activator RhaS | cofit | 25 | 87 |
| | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01105 | | transcriptional regulator, AraC family | insig. | 32 | 35 |
| | Pseudomonas putida KT2440 | PP_5244 | | Transcriptional regulator, AraC family | insig. | 36 | 39 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3186 | | Transcriptional regulator, AraC family | insig. | 34 | 35 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_3188 | | Transcriptional regulator, AraC family | insig. | 30 | 44 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS05450 | | AraC family transcriptional regulator | no data | 32 | 38 |
| | Burkholderia phytofirmans PsJN | BPHYT_RS30415 | | AraC family transcriptional regulator | insig. | 31 | 37 |
| | Variovorax sp. SCN45 | GFF4963 | | Transcriptional regulator, AraC family | insig. | 31 | 39 |
| | Paraburkholderia graminis OAS925 | ABIE53_002253 | | AraC family transcriptional regulator | insig. | 31 | 35 |
| | Paraburkholderia graminis OAS925 | ABIE53_004382 | | AraC family transcriptional activator of mtrCDE | insig. | 30 | 44 |
| | Pseudomonas sp. S08-1 | OH686_05700 | | Transcriptional regulator, AraC family | insig. | 24 | 87 |
| | Klebsiella pneumoniae MKP103 | KDGMDA_08290 | | AraC family transcriptional regulator | insig. | 32 | 40 |
| | Pseudomonas sp. DMC3 | GFF1896 | | HTH-type transcriptional activator RhaS | cofit | 28 | 36 |
| | Pseudomonas stutzeri RCH2 | Psest_2061 | | Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain | insig. | 25 | 51 |
| | Paraburkholderia sabiae LMG 24235 | QEN71_RS23660 | | AraC family transcriptional regulator | insig. | 25 | 74 |
| | Escherichia coli ECRC100 | OKFHMN_15100 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | cofit | 24 | 84 |
| | Escherichia coli ECRC101 | MCAODC_05610 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 24 | 84 |
| | Escherichia coli ECRC102 | NIAGMN_12855 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 24 | 84 |
| | Escherichia coli ECRC98 | JDDGAC_18720 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 24 | 84 |
| | Escherichia coli ECRC99 | KEDOAH_13050 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | no data | 24 | 84 |
| | Herbaspirillum seropedicae SmR1 | HSERO_RS22565 | | AraC family transcriptional regulator | insig. | 33 | 29 |
| | Escherichia coli BL21 | ECD_03564 | | AraC family putative transcriptional regulator | insig. | 24 | 84 |
| | Escherichia coli ECOR27 | NOLOHH_07265 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 24 | 84 |
| | Escherichia coli ECRC62 | BNILDI_04260 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 24 | 84 |
| | Escherichia coli BW25113 | b3680 | yidL | predicted DNA-binding transcriptional regulator (RefSeq) | insig. | 24 | 84 |
| | Enterobacter sp. TBS_079 | MPMX20_02542 | | HTH-type transcriptional activator RhaR | insig. | 31 | 37 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5308 | | Transcriptional regulator, AraC family | strong | 23 | 89 |
| | Azospirillum brasilense Sp245 | AZOBR_RS17970 | | AraC family transcriptional regulator | insig. | 26 | 56 |
| | Phocaeicola vulgatus CL09T03C04 | HMPREF1058_RS08915 | | AraC family transcriptional regulator | strong | 21 | 84 |
| | Cupriavidus basilensis FW507-4G11 | RR42_RS27175 | | AraC family transcriptional regulator | insig. | 35 | 41 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS25165 | | GlxA family transcriptional regulator | strong | 32 | 49 |
| | Pseudomonas aeruginosa PA14 | IKLFDK_26530 | | HTH-type transcriptional regulator GbdR | strong | 32 | 49 |
| | Pseudomonas aeruginosa PUPa3 | DQ20_RS43475 | | GlxA family transcriptional regulator | strong | 32 | 49 |
| | Escherichia coli ECOR38 | HEPCGN_13830 | yidL | Uncharacterized HTH-type transcriptional regulator YidL | insig. | 23 | 84 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_6086 | | Transcriptional regulator, AraC family | insig. | 27 | 68 |
| | Pseudomonas aeruginosa MRSN321 | DY961_RS00550 | | AraC family transcriptional regulator | insig. | 24 | 86 |