Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Bifidobacterium breve UCC2003 | BBR_RS10790 | | LacI family transcriptional regulator | strong | 100 | 100 |
| Bifidobacterium breve UCC2003 | BBR_RS10775 | | LacI family transcriptional regulator | cofit | 57 | 100 |
o | Burkholderia phytofirmans PsJN | BPHYT_RS11205 | | LacI family transcription regulator | strong | 32 | 91 |
| Pseudomonas putida KT2440 | PP_2457 | | DNA-binding transcriptional repressor | strong | 32 | 88 |
| Paraburkholderia sabiae LMG 24235 | QEN71_RS07355 | | LacI family DNA-binding transcriptional regulator | sig. | 34 | 78 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2154 | | transcriptional regulator, LacI family | sig. | 33 | 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2154 | | transcriptional regulator, LacI family | insig. | 33 | 88 |
| Paraburkholderia graminis OAS925 | ABIE53_002322 | | LacI family transcriptional regulator | strong | 32 | 92 |
| Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_05228 | | transcriptional regulator, LacI family | sig. | 32 | 92 |
| Agrobacterium fabrum C58 | Atu3062 | | LacI family transcriptional regulator | insig. | 31 | 84 |
| Serratia liquefaciens MT49 | IAI46_25050 | | ribose operon transcriptional repressor RbsR | insig. | 32 | 83 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_6032 | | Ribose operon repressor | insig. | 33 | 84 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20830 | | LacI family transcriptional regulator | strong | 31 | 84 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_164 | | Ribose operon repressor | strong | 31 | 84 |
| Pseudomonas simiae WCS417 | PS417_18390 | | LacI family transcriptional regulator | strong | 31 | 88 |
| Pseudomonas fluorescens SBW25 | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | insig. | 30 | 88 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS20365 | | LacI family DNA-binding transcriptional regulator | sig. | 30 | 88 |
| Ralstonia solanacearum IBSBF1503 | RALBFv3_RS14240 | | LacI family transcriptional regulator | strong | 32 | 87 |
| Ralstonia solanacearum UW163 | UW163_RS11705 | | LacI family transcriptional regulator | insig. | 32 | 87 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_00955 | | LacI family transcriptional regulator | strong | 32 | 84 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_14670 | | transcriptional repressor PurR | insig. | 31 | 83 |
| Ralstonia sp. UNC404CL21Col | ABZR87_RS09955 | | LacI family DNA-binding transcriptional regulator | strong | 31 | 78 |
| Ralstonia solanacearum PSI07 | RPSI07_RS19225 | | LacI family transcriptional regulator | insig. | 31 | 87 |
| Ralstonia solanacearum GMI1000 | RS_RS05020 | | LacI family transcriptional regulator | sig. | 31 | 87 |
| Pseudomonas sp. RS175 | PFR28_02734 | | Ribose operon repressor | strong | 31 | 84 |
| Pectobacterium carotovorum WPP14 | HER17_RS21525 | | ribose operon transcriptional repressor RbsR | strong | 32 | 83 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3909 | | Ribose operon repressor | strong | 30 | 82 |
| Enterobacter asburiae PDN3 | EX28DRAFT_4029 | | transcriptional regulator, LacI family | strong | 30 | 82 |
| Shewanella amazonensis SB2B | Sama_1400 | | periplasmic binding protein/LacI transcriptional regulator (RefSeq) | strong | 30 | 83 |
| Dickeya dianthicola 67-19 | HGI48_RS21310 | | ribose operon transcriptional repressor RbsR | strong | 30 | 82 |
| Enterobacter sp. TBS_079 | MPMX20_04614 | | Ribose operon repressor | strong | 30 | 82 |
| Pantoea sp. MT58 | IAI47_00375 | | ribose operon transcriptional repressor RbsR | strong | 29 | 82 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS11495 | | LacI family transcription regulator | strong | 31 | 83 |
| Dickeya dadantii 3937 | DDA3937_RS00055 | | ribose operon transcriptional repressor RbsR | strong | 30 | 83 |
| Alteromonas macleodii MIT1002 | MIT1002_04103 | | Galactose operon repressor | strong | 29 | 83 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF1704 | | Ribose operon repressor | insig. | 28 | 82 |
| Klebsiella michiganensis M5al | BWI76_RS00295 | | transcriptional regulator RbsR | strong | 28 | 82 |
| Klebsiella michiganensis M5al | BWI76_RS14595 | | cytochrome-c peroxidase | insig. | 28 | 83 |
| Variovorax sp. OAS795 | ABID97_RS24770 | | LacI family DNA-binding transcriptional regulator | strong | 30 | 83 |
| Rahnella sp. WP5 | EX31_RS06195 | | ribose operon transcriptional repressor RbsR | cofit | 27 | 83 |
| Azospirillum sp. SherDot2 | MPMX19_03117 | | Catabolite control protein A | insig. | 30 | 87 |
| Rahnella sp. WP5 | EX31_RS13830 | | HTH-type transcriptional repressor PurR | insig. | 28 | 83 |
| Pantoea sp. MT58 | IAI47_16755 | | LacI family DNA-binding transcriptional regulator | insig. | 30 | 83 |
| Phaeobacter inhibens DSM 17395 | PGA1_c07290 | | transcriptional regulator, lacI family | strong | 31 | 83 |
| Escherichia coli Nissle 1917 | ECOLIN_RS21575 | | ribose operon transcriptional repressor RbsR | insig. | 28 | 83 |
| Escherichia fergusonii Becca | EFB2_04880 | | Ribose operon repressor | cofit | 28 | 83 |
| Escherichia coli BW25113 | b3753 | rbsR | DNA-binding transcriptional repressor of ribose metabolism (NCBI) | strong | 28 | 83 |
| Acidovorax sp. GW101-3H11 | Ac3H11_1840 | | Ribose operon repressor | strong | 31 | 83 |
| Dickeya dadantii 3937 | DDA3937_RS12620 | | HTH-type transcriptional repressor PurR | sig. | 28 | 83 |
| Escherichia coli BL21 | ECD_03639 | | transcriptional repressor of ribose metabolism | insig. | 28 | 83 |
| Escherichia coli ECOR27 | NOLOHH_06860 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 28 | 82 |
| Escherichia coli ECOR38 | HEPCGN_13435 | rbsR | ribose operon transcriptional repressor RbsR | cofit | 28 | 82 |
| Escherichia coli ECRC101 | OKFHMN_14725 | rbsR | ribose operon transcriptional repressor RbsR | insig. | 28 | 82 |
| Escherichia coli ECRC101 | MCAODC_05230 | rbsR | ribose operon transcriptional repressor RbsR | insig. | 28 | 82 |
| Escherichia coli ECRC102 | NIAGMN_12480 | rbsR | ribose operon transcriptional repressor RbsR | sig. | 28 | 82 |
| Escherichia coli ECRC62 | BNILDI_04665 | rbsR | ribose operon transcriptional repressor RbsR | sig. | 28 | 82 |
| Escherichia coli ECRC98 | JDDGAC_18345 | rbsR | ribose operon transcriptional repressor RbsR | no data | 28 | 82 |
| Escherichia coli ECRC99 | KEDOAH_13425 | rbsR | ribose operon transcriptional repressor RbsR | no data | 28 | 82 |
| Dickeya dianthicola ME23 | DZA65_RS22290 | | substrate-binding domain-containing protein | cofit | 30 | 83 |
| Dickeya dianthicola 67-19 | HGI48_RS12685 | | HTH-type transcriptional repressor PurR | sig. | 27 | 83 |
| Dickeya dianthicola ME23 | DZA65_RS13140 | | HTH-type transcriptional repressor PurR | insig. | 27 | 83 |
| Variovorax sp. SCN45 | GFF2137 | | Ribose operon repressor | strong | 30 | 83 |
| Pectobacterium carotovorum WPP14 | HER17_RS09235 | | HTH-type transcriptional repressor PurR | cofit | 27 | 83 |
| Pseudomonas simiae WCS417 | PS417_15460 | | GntR family transcriptional regulator | insig. | 27 | 90 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4696 | | transcriptional regulator, LacI family | insig. | 31 | 88 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4696 | | transcriptional regulator, LacI family | insig. | 31 | 88 |
| Klebsiella michiganensis M5al | BWI76_RS00765 | | DNA-binding transcriptional regulator CytR | strong | 29 | 82 |
| Serratia liquefaciens MT49 | IAI46_11240 | | HTH-type transcriptional repressor PurR | insig. | 27 | 83 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF2316 | | Transcriptional (co)regulator CytR | insig. | 28 | 82 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04300 | | Ribose operon repressor | insig. | 33 | 52 |
| Pantoea sp. MT58 | IAI47_10795 | | HTH-type transcriptional repressor PurR | sig. | 26 | 83 |
| Enterobacter asburiae PDN3 | EX28DRAFT_1655 | | Transcriptional regulators | insig. | 25 | 83 |
| Erwinia tracheiphila SCR3 | LU632_RS11190 | purR | HTH-type transcriptional repressor PurR | insig. | 26 | 83 |
| Vibrio cholerae E7946 ATCC 55056 | CSW01_08660 | | PurR family transcriptional regulator | cofit | 28 | 83 |
| Enterobacter sp. TBS_079 | MPMX20_01978 | | HTH-type transcriptional repressor PurR | sig. | 25 | 83 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF1544 | | Transcriptional regulatory protein | strong | 30 | 82 |
| Escherichia coli ECOR27 | NOLOHH_17905 | purR | HTH-type transcriptional repressor PurR | strong | 26 | 83 |
| Serratia liquefaciens MT49 | IAI46_22025 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 78 |
| Dinoroseobacter shibae DFL-12 | Dshi_1273 | | transcriptional regulator, LacI family (RefSeq) | insig. | 31 | 83 |
| Serratia liquefaciens MT49 | IAI46_23035 | | LacI family DNA-binding transcriptional regulator | insig. | 29 | 83 |
| Pseudomonas syringae pv. syringae B728a | Psyr_0777 | | transcriptional regulator, LacI family | insig. | 28 | 83 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_0777 | | transcriptional regulator, LacI family | insig. | 28 | 83 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_4095 | | Transcriptional regulator, LacI family | no data | 27 | 83 |
| Rahnella sp. WP5 | EX31_RS14230 | | DNA-binding transcriptional regulator CytR | insig. | 28 | 82 |
| Enterobacter sp. TBS_079 | MPMX20_00737 | | Maltose regulon regulatory protein MalI | insig. | 30 | 51 |
| Rahnella sp. WP5 | EX31_RS06875 | | Mal regulon transcriptional regulator MalI | insig. | 30 | 71 |
| Escherichia coli BL21 | ECD_03819 | | Anti-activator for CytR-CRP nucleoside utilization regulon | sig. | 27 | 82 |
| Escherichia coli ECOR27 | NOLOHH_05870 | cytR | DNA-binding transcriptional regulator CytR | cofit | 27 | 82 |
| Escherichia coli ECOR38 | HEPCGN_12370 | cytR | DNA-binding transcriptional regulator CytR | cofit | 27 | 82 |
| Escherichia coli ECRC101 | OKFHMN_13725 | cytR | DNA-binding transcriptional regulator CytR | insig. | 27 | 82 |
| Escherichia coli ECRC101 | MCAODC_04225 | cytR | DNA-binding transcriptional regulator CytR | insig. | 27 | 82 |
| Escherichia coli ECRC102 | NIAGMN_11480 | cytR | DNA-binding transcriptional regulator CytR | insig. | 27 | 82 |
| Escherichia coli ECRC62 | BNILDI_05660 | cytR | DNA-binding transcriptional regulator CytR | insig. | 27 | 82 |
| Escherichia coli ECRC98 | JDDGAC_17350 | cytR | DNA-binding transcriptional regulator CytR | no data | 27 | 82 |
| Escherichia coli ECRC99 | KEDOAH_14435 | cytR | DNA-binding transcriptional regulator CytR | no data | 27 | 82 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04117 | | HTH-type transcriptional repressor CytR | insig. | 27 | 82 |
| Escherichia coli Nissle 1917 | ECOLIN_RS22650 | | DNA-binding transcriptional regulator CytR | cofit | 27 | 82 |
| Escherichia coli BW25113 | b3934 | cytR | DNA-binding transcriptional dual regulator (NCBI) | strong | 27 | 82 |
| Pseudomonas fluorescens SBW25 | PFLU_RS17445 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 89 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS17445 | | LacI family DNA-binding transcriptional regulator | insig. | 26 | 89 |