Homologs of Atu1990 from Agrobacterium fabrum C58

bacteriophytochrome protein
SEED: Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-)
KEGG:

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Agrobacterium fabrum C58 Atu1990 bacteriophytochrome protein insig. 100 100
o Azospirillum sp. SherDot2 MPMX19_04272 Phytochrome-like protein cph1 insig. 48 99
o Azospirillum brasilense Sp245 AZOBR_RS30860 sensor histidine kinase strong 52 85
o Pseudomonas stutzeri RCH2 Psest_4345 Bacteriophytochrome (light-regulated signal transduction histidine kinase) strong 45 98
o Pseudomonas sp. BP01 JOY50_RS10835 ATP-binding protein insig. 44 98
o Pseudomonas putida KT2440 PP_2356 putative Phytochrome family protein strong 45 98
o Paraburkholderia sabiae LMG 24235 QEN71_RS10565 ATP-binding protein cofit 44 98
o Variovorax sp. SCN45 GFF651 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 42 98
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01748 Bacteriophytochrome (light-regulated signal transduction histidine kinase) strong 42 97
o Burkholderia phytofirmans PsJN BPHYT_RS06325 ATPase strong 42 97
o Rhodopseudomonas palustris CGA009 TX73_015620 ATP-binding protein insig. 37 98
o Ralstonia sp. UNC404CL21Col ABZR87_RS02225 ATP-binding protein strong 40 99
  Rhodopseudomonas palustris CGA009 TX73_015615 ATP-binding protein insig. 39 99
o Synechocystis sp000284455 PCC 6803 SGL_RS14030 ATP-binding protein cofit 36 97
o Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS03395 ATP-binding protein strong 33 98
o Pedobacter sp. GW460-11-11-14-LB5 CA265_RS08760 histidine kinase strong 33 98
  Pseudomonas syringae pv. syringae B728a Psyr_2385 Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase insig. 33 97
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2385 Phytochrome:GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:HWE histidine kinase insig. 33 97
o Pseudomonas fluorescens FW300-N2C3 AO356_09865 histidine kinase sig. 34 98
o Pseudomonas sp. DMC3 GFF1005 Phytochrome-like protein cph1 cofit 33 98
  Pseudomonas syringae pv. syringae B728a Psyr_3504 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 34 98
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3504 GAF:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal insig. 34 98
o Pseudomonas orientalis W4I3 QF045_RS25570 ATP-binding protein cofit 34 98
o Pseudomonas fluorescens SBW25 PFLU_RS25130 GAF domain-containing protein insig. 33 98
o Pseudomonas fluorescens SBW25-INTG PFLU_RS25130 GAF domain-containing protein sig. 33 98
o Pseudomonas lactucae CFBP13502 GEMAOFIL_04813 Phytochrome-like protein cph1 cofit 34 98
o Pseudomonas sp. RS175 PFR28_04918 Phytochrome-like protein cph1 insig. 33 98
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3852 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) sig. 33 98
o Pseudomonas simiae WCS417 PS417_23325 histidine kinase insig. 33 98
o Pontibacter actiniarum KMM 6156, DSM 19842 CA264_05925 hypothetical protein cofit 31 98
o Herbaspirillum seropedicae SmR1 HSERO_RS12460 light-regulated signal transduction histidine kinase insig. 33 98
  Variovorax sp. SCN45 GFF1412 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) insig. 32 98
  Rhodopseudomonas palustris CGA009 TX73_000630 ATP-binding protein insig. 34 98
  Pseudomonas aeruginosa MRSN321 DY961_RS28065 bphP;inference=COORDINATES bacteriophytochrome BphP insig. 33 99
  Pseudomonas aeruginosa PA14 IKLFDK_21205 bacteriophytochrome BphP insig. 33 99
  Pseudomonas aeruginosa PUPa3 DQ20_RS47575 bphP;inference=COORDINATES bacteriophytochrome BphP insig. 33 99
  Bosea sp. OAE506 ABIE41_RS08275 HWE histidine kinase domain-containing protein insig. 35 76
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_08315 PAS sensor protein sig. 35 66
  Agrobacterium fabrum C58 Atu2165 bacteriophytochrome protein insig. 35 67
  Azospirillum brasilense Sp245 AZOBR_RS30160 chemotaxis protein CheY insig. 37 66
  Sphingobium sp. HT1-2 GFF650 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 32 73
  Xanthobacter sp. DMC5 GFF4286 Phytochrome-like protein cph1 insig. 34 73
  Sphingobium sp. HT1-2 GFF5140 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 35 67
  Pseudomonas putida KT2440 PP_3364 Response regulator insig. 34 67
  Rhizobium sp. OAE497 ABIE40_RS14515 HWE histidine kinase domain-containing protein insig. 35 71
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.5288.1 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) insig. 35 66
  Rhodopseudomonas palustris CGA009 TX73_005095 HWE histidine kinase domain-containing protein insig. 33 79
  Pseudomonas sp. BP01 JOY50_RS14150 HWE histidine kinase domain-containing protein insig. 34 67
o Alteromonas macleodii MIT1002 MIT1002_03619 Phytochrome-like protein cph1 insig. 27 98
  Alteromonas macleodii MIT1002 MIT1002_02965 Phytochrome-like protein cph1 insig. 28 100
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS15480 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 31 94
  Azospirillum sp. SherDot2 MPMX19_01598 hypothetical protein insig. 34 76
  Phaeobacter inhibens DSM 17395 PGA1_c28680 putative bacteriophytochrome insig. 32 74
  Magnetospirillum magneticum AMB-1 AMB_RS16825 hypothetical protein insig. 34 65
  Rhizobium sp. OAE497 ABIE40_RS26950 histidine kinase dimerization/phosphoacceptor domain -containing protein insig. 35 69
  Lysobacter sp. OAE881 ABIE51_RS17880 GAF domain-containing protein insig. 36 68
  Rhodopseudomonas palustris CGA009 TX73_007660 GAF domain-containing protein cofit 29 93
  Lysobacter sp. OAE881 ABIE51_RS14685 ATP-binding protein insig. 49 32
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS11085 ATP-binding protein strong 50 32
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS05045 ATP-binding protein sig. 50 32
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS04965 ATP-binding protein strong 52 31
  Rhodanobacter denitrificans MT42 LRK55_RS04825 ATP-binding protein sig. 50 32
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.930.1 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) strong 50 32
  Rhodanobacter sp. FW510-T8 OKGIIK_01705 Histidine kinase insig. 50 33
  Rhodospirillum rubrum S1H Rru_A2235 Multi-sensor Signal Transduction Histidine Kinase (NCBI) strong 33 62
  Dechlorosoma suillum PS Dsui_1549 PAS domain S-box cofit 50 31
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF2732 Phytochrome, two-component sensor histidine kinase (EC 2.7.3.-) cofit 49 31
  Mucilaginibacter yixingensis YX-36 DSM 26809 ABZR88_RS19655 ATP-binding protein insig. 44 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4030 sensory box histidine kinase insig. 46 31
  Herbaspirillum seropedicae SmR1 HSERO_RS12860 histidine kinase strong 45 31
  Lysobacter sp. OAE881 ABIE51_RS11685 CHASE domain-containing protein strong 49 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1357 Sensory box histidine kinase insig. 39 35
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3648 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) insig. 42 31
  Dechlorosoma suillum PS Dsui_2779 PAS domain S-box no data 41 35
  Magnetospirillum magneticum AMB-1 AMB_RS05725 PAS domain S-box protein insig. 39 32
  Pseudomonas sp. S08-1 OH686_08920 Phytochrome, two-component sensor histidine kinase / cyanobacterial phytochrome 1 cofit 38 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF3596 Sensory box histidine kinase insig. 41 31
  Synechococcus elongatus PCC 7942 Synpcc7942_1357 multi-sensor signal transduction histidine kinase insig. 38 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF5581 diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) cofit 44 31
  Dechlorosoma suillum PS Dsui_2125 PAS domain S-box insig. 37 32
  Magnetospirillum magneticum AMB-1 AMB_RS06355 PAS domain-containing sensor histidine kinase insig. 38 33
  Magnetospirillum magneticum AMB-1 AMB_RS07145 two-component sensor histidine kinase insig. 39 33
  Alteromonas macleodii MIT1002 MIT1002_02378 Phytochrome-like protein cph1 no data 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS24560 hypothetical protein insig. 41 31
  Magnetospirillum magneticum AMB-1 AMB_RS18500 two-component sensor histidine kinase cofit 38 34
  Magnetospirillum magneticum AMB-1 AMB_RS23455 PAS domain S-box protein insig. 38 31
  Rhodospirillum rubrum S1H Rru_A1875 Multi-sensor Signal Transduction Histidine Kinase (NCBI) insig. 37 32
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1489 Sensory box histidine kinase insig. 38 32
  Magnetospirillum magneticum AMB-1 AMB_RS13305 PAS domain S-box protein cofit 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS23670 two-component sensor histidine kinase insig. 35 33
  Magnetospirillum magneticum AMB-1 AMB_RS18845 PAS domain S-box protein cofit 38 31
  Cellulophaga baltica 18 M666_RS19950 PAS domain-containing protein cofit 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS19635 hybrid sensor histidine kinase/response regulator insig. 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS17135 PAS domain-containing sensor histidine kinase cofit 39 31
  Magnetospirillum magneticum AMB-1 AMB_RS24005 PAS domain-containing sensor histidine kinase insig. 36 35
  Magnetospirillum magneticum AMB-1 AMB_RS10105 PAS domain-containing sensor histidine kinase insig. 35 32
  Magnetospirillum magneticum AMB-1 AMB_RS17885 PAS domain S-box protein insig. 34 38
  Magnetospirillum magneticum AMB-1 AMB_RS18355 PAS domain S-box protein cofit 36 32
  Magnetospirillum magneticum AMB-1 AMB_RS18035 PAS domain-containing sensor histidine kinase insig. 36 35
  Magnetospirillum magneticum AMB-1 AMB_RS17315 PAS domain-containing sensor histidine kinase insig. 35 32