| Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
|---|
| | Pseudomonas fluorescens FW300-N2C3 | AO356_03845 | | Fis family transcriptional regulator | cofit | 100 | 100 |
| o | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2595 | | Flagellar regulatory protein FleQ | sig. | 96 | 100 |
| o | Pseudomonas sp. RS175 | PFR28_00830 | | Regulatory protein AtoC | cofit | 93 | 100 |
| o | Pseudomonas fluorescens FW300-N2E3 | AO353_18670 | | Fis family transcriptional regulator | strong | 91 | 100 |
| o | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4355 | | Flagellar regulatory protein FleQ | sig. | 91 | 100 |
| o | Pseudomonas fluorescens SBW25 | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 88 | 100 |
| o | Pseudomonas fluorescens SBW25-INTG | PFLU_RS21785 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 88 | 100 |
| o | Pseudomonas simiae WCS417 | PS417_19815 | | Fis family transcriptional regulator | no data | 88 | 100 |
| o | Pseudomonas syringae pv. syringae B728a | Psyr_3459 | | Helix-turn-helix, Fis-type | insig. | 83 | 100 |
| o | Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_3459 | | Helix-turn-helix, Fis-type | insig. | 83 | 100 |
| o | Pseudomonas sp. S08-1 | OH686_02845 | | Flagellar two-component response regulator FleR | strong | 79 | 100 |
| o | Pseudomonas putida KT2440 | PP_4371 | | two component system AtoC DNA-binding transcriptional activator | strong | 81 | 100 |
| o | Pseudomonas stutzeri RCH2 | Psest_1767 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 76 | 100 |
| o | Marinobacter adhaerens HP15 | HP15_2328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 58 | 99 |
| o | Alteromonas macleodii MIT1002 | MIT1002_01083 | | Transcriptional regulatory protein ZraR | cofit | 55 | 98 |
| o | Vibrio cholerae E7946 ATCC 55056 | CSW01_10660 | | sigma-54-dependent Fis family transcriptional regulator | cofit | 55 | 98 |
| o | Shewanella oneidensis MR-1 | SO3230 | flrC | flagellar regulatory protein C (NCBI ptt file) | cofit | 55 | 98 |
| o | Shewanella sp. ANA-3 | Shewana3_1340 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 56 | 98 |
| o | Shewanella loihica PV-4 | Shew_1364 | | two component, sigma54 specific, Fis family transcriptional regulator (RefSeq) | strong | 55 | 98 |
| o | Shewanella amazonensis SB2B | Sama_2299 | | response regulator receiver protein (RefSeq) | sig. | 54 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3601 | | Flagellar regulatory protein FleQ | insig. | 93 | 50 |
| o | Dechlorosoma suillum PS | Dsui_1758 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 53 | 97 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3602 | | Flagellar regulatory protein FleQ | no data | 87 | 43 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0110 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | cofit | 44 | 98 |
| | Escherichia coli BL21 | ECD_02147 | | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein | cofit | 41 | 96 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01490 | | Regulatory protein AtoC | insig. | 41 | 96 |
| | Escherichia coli BW25113 | b2220 | atoC | fused response regulator of ato operon, in two-component system with AtoS: response regulator/sigma54 interaction protein (NCBI) | insig. | 41 | 96 |
| | Escherichia fergusonii Becca | EFB2_01635 | | Regulatory protein AtoC | insig. | 42 | 96 |
| | Escherichia coli ECOR38 | HEPCGN_22430 | atoC | acetoacetate metabolism transcriptional regulator AtoC | cofit | 42 | 96 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS12965 | | acetoacetate metabolism transcriptional regulator AtoC | no data | 42 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_4174 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | insig. | 45 | 89 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1993 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | sig. | 41 | 98 |
| o | Caulobacter crescentus NA1000 | CCNA_00954 | | AAA-family response regulator flbD | strong | 46 | 93 |
| o | Caulobacter crescentus NA1000 Δfur | CCNA_00954 | | AAA-family response regulator flbD | cofit | 46 | 93 |
| o | Paraburkholderia bryophila 376MFSha3.1 | H281DRAFT_01779 | | DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains | insig. | 44 | 96 |
| | Erwinia tracheiphila SCR3 | LU632_RS20500 | | sigma-54 dependent transcriptional regulator | no data | 50 | 71 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16225 | | Fis family transcriptional regulator | insig. | 40 | 97 |
| o | Magnetospirillum magneticum AMB-1 | AMB_RS02570 | | sigma-54-dependent Fis family transcriptional regulator | insig. | 46 | 91 |
| o | Burkholderia phytofirmans PsJN | BPHYT_RS30045 | | ATPase AAA | insig. | 44 | 96 |
| | Escherichia coli Nissle 1917 | ECOLIN_RS23090 | | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 96 |
| | Escherichia fergusonii Becca | EFB2_04606 | | Transcriptional regulatory protein ZraR | insig. | 40 | 96 |
| | Escherichia coli ECOR38 | HEPCGN_11960 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 40 | 96 |
| | Escherichia coli BW25113 | b4004 | zraR | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein (NCBI) | insig. | 40 | 96 |
| | Escherichia coli BL21 | ECD_03881 | | fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein | insig. | 40 | 96 |
| | Escherichia coli ECRC62 | BNILDI_06055 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 96 |
| | Pseudomonas simiae WCS417 | PS417_05525 | | Fis family transcriptional regulator | strong | 40 | 97 |
| | Klebsiella michiganensis M5al | BWI76_RS01605 | | transcriptional regulatory protein ZraR | insig. | 41 | 96 |
| | Escherichia coli ECOR27 | NOLOHH_05465 | zraR | sigma-54-dependent response regulator transcription factor ZraR | cofit | 40 | 96 |
| | Escherichia coli ECRC101 | MCAODC_03820 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 96 |
| | Escherichia coli ECRC102 | NIAGMN_11070 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 96 |
| | Escherichia coli ECRC99 | KEDOAH_14840 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 40 | 96 |
| | Dechlorosoma suillum PS | Dsui_2360 | | response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains | cofit | 48 | 78 |
| | Pseudomonas fluorescens SBW25 | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 97 |
| | Pseudomonas fluorescens SBW25-INTG | PFLU_RS05610 | | sigma-54-dependent Fis family transcriptional regulator | strong | 40 | 97 |
| | Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_04045 | | Transcriptional regulatory protein ZraR | insig. | 40 | 96 |
| | Variovorax sp. SCN45 | GFF3669 | | Two-component system response regulator protein | no data | 43 | 96 |
| o | Rhodospirillum rubrum S1H | Rru_A0540 | | Two Component, Sigma54 Specific, Transcriptional Regulator, Fis family (NCBI) | insig. | 45 | 94 |
| | Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | GFF4188 | | Response regulator of zinc sigma-54-dependent two-component system | insig. | 40 | 96 |
| | Escherichia coli ECRC98 | JDDGAC_16945 | zraR | sigma-54-dependent response regulator transcription factor ZraR | no data | 40 | 96 |
| | Escherichia coli ECRC101 | OKFHMN_13320 | zraR | sigma-54-dependent response regulator transcription factor ZraR | insig. | 40 | 96 |
| | Azospirillum sp. SherDot2 | MPMX19_03461 | | Regulatory protein AtoC | insig. | 39 | 96 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1461 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | no data | 45 | 78 |
| | Marinobacter adhaerens HP15 | HP15_328 | | two component, sigma54 specific, transcriptional regulator, Fis family | strong | 39 | 95 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_2149 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | strong | 42 | 96 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_0823 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 40 | 97 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU0118 | ntrC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 42 | 96 |
| | Pseudomonas sp. S08-1 | OH686_17260 | | Two-component sensor CbrB: intrcellular carbon:nitrogen balance | strong | 44 | 78 |
| | Rhodopseudomonas palustris CGA009 | TX73_021705 | | sigma-54 dependent transcriptional regulator | sig. | 39 | 97 |
| | Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF610 | | Putative sensory histidine kinase YfhA | insig. | 42 | 96 |
| | Rhodanobacter denitrificans FW104-10B01 | LRK54_RS05020 | | sigma-54 dependent transcriptional regulator | strong | 38 | 96 |
| | Variovorax sp. OAS795 | ABID97_RS06460 | | sigma 54-interacting transcriptional regulator | cofit | 42 | 97 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1419 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | sig. | 40 | 96 |
| | Variovorax sp. SCN45 | GFF7323 | | Transcriptional response regulatory protein GlrR | insig. | 43 | 96 |
| | Pseudomonas sp. S08-1 | OH686_13325 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | cofit | 46 | 76 |
| | Pseudomonas putida KT2440 | PP_1066 | | C4-dicarboxylate transport transcriptional regulatory protein | strong | 39 | 96 |
| | Pontibacter actiniarum KMM 6156, DSM 19842 | CA264_09510 | | sigma-54-dependent Fis family transcriptional regulator | sig. | 40 | 96 |
| | Pseudomonas sp. S08-1 | OH686_16390 | | Type IV fimbriae expression regulatory protein PilR | cofit | 39 | 96 |
| | Pseudomonas stutzeri RCH2 | Psest_0705 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 39 | 98 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_4775 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | strong | 46 | 76 |
| | Desulfovibrio vulgaris Miyazaki F | DvMF_1260 | | two component, sigma54 specific, transcriptional regulator, Fis family (RefSeq) | insig. | 41 | 96 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS09115 | | sigma-54 dependent transcriptional regulator | insig. | 39 | 98 |
| | Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_776 | | Two component, Sigma-54 Specific, central transcriptional regulator of acidic amino acid uptake | insig. | 46 | 76 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU1063 | flrC | transcriptional regulatory protein (TIGR) | strong | 43 | 94 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU2114 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | insig. | 42 | 96 |
| | Caulobacter crescentus NA1000 | CCNA_03424 | | AAA-family response regulator tacA | strong | 38 | 99 |
| | Caulobacter crescentus NA1000 Δfur | CCNA_03424 | | AAA-family response regulator tacA | cofit | 38 | 99 |
| | Pseudomonas sp. RS175 | PFR28_03376 | | C4-dicarboxylate transport transcriptional regulatory protein DctD | sig. | 46 | 76 |
| | Pseudomonas fluorescens FW300-N2C3 | AO356_15905 | | transcriptional regulator | insig. | 39 | 98 |
| | Klebsiella michiganensis M5al | BWI76_RS21250 | | two-component system response regulator GlrR | sig. | 44 | 78 |
| | Pseudomonas fluorescens FW300-N2E3 | AO353_16265 | | Fis family transcriptional regulator | strong | 46 | 76 |
| | Pseudomonas stutzeri RCH2 | Psest_0999 | | Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains | strong | 44 | 78 |
| | Shewanella amazonensis SB2B | Sama_1549 | | response regulator receiver protein (RefSeq) | insig. | 39 | 97 |
| | Pseudomonas fluorescens GW456-L13 | PfGW456L13_1489 | | Type IV fimbriae expression regulatory protein PilR | insig. | 40 | 98 |
| | Dickeya dadantii 3937 | DDA3937_RS00125 | | nitrogen regulation protein NR(I) | cofit | 39 | 96 |
| | Agrobacterium fabrum C58 | Atu1446 | | two component response regulator | strong | 38 | 97 |
| o | Rhizobium sp. OAE497 | ABIE40_RS16175 | | sigma-54 dependent transcriptional regulator | strong | 38 | 98 |
| | Desulfovibrio vulgaris Hildenborough JW710 | DVU3220 | atoC | sigma-54 dependent transcriptional regulator/response regulator (TIGR) | no data | 42 | 96 |
| | Rhodanobacter sp. FW510-T8 | OKGIIK_01730 | atoC | sigma-54-dependent Fis family transcriptional regulator | insig. | 38 | 96 |
| | Brevundimonas sp. GW460-12-10-14-LB2 | A4249_RS09765 | | sigma-54 dependent transcriptional regulator | insig. | 48 | 77 |
| | Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_5122 | | Type IV fimbriae expression regulatory protein PilR | insig. | 38 | 98 |