Homologs of ABZR86_RS15920 from Dyella japonica UNC79MFTsu3.2

sigma-70 family RNA polymerase sigma factor
KEGG: RNA polymerase sigma-70 factor, ECF subfamily

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS15920 sigma-70 family RNA polymerase sigma factor insig. 100 100
  Lysobacter sp. OAE881 ABIE51_RS06950 RNA polymerase sigma factor strong 50 98
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09390 sigma-70 family RNA polymerase sigma factor insig. 51 83
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09360 RNA polymerase sigma factor insig. 47 94
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09420 RNA polymerase sigma factor sig. 37 77
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09455 RNA polymerase sigma factor insig. 37 94
o Sphingomonas koreensis DSMZ 15582 Ga0059261_0532 RNA polymerase sigma factor, sigma-70 family insig. 36 84
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3549 RNA polymerase sigma factor, sigma-70 family insig. 34 85
  Sphingomonas koreensis DSMZ 15582 Ga0059261_3041 RNA polymerase sigma factor, sigma-70 family insig. 40 83
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0778 RNA polymerase sigma factor, sigma-70 family insig. 33 94
  Rhodospirillum rubrum S1H Rru_A1438 Sigma-24 (FecI) (NCBI) cofit 36 82
o Herbaspirillum seropedicae SmR1 HSERO_RS12165 RNA polymerase sigma factor insig. 33 88
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00640 sigma-70 family RNA polymerase sigma factor cofit 32 99
  Azospirillum brasilense Sp245 AZOBR_RS30810 RNA polymerase sigma70 insig. 32 79
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_3656 RNA polymerase sigma-70 factor, Bacteroides expansion family 1 insig. 31 89
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF1181 FIG006045: Sigma factor, ECF subfamily insig. 35 83
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_133 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis insig. 34 80
  Pseudomonas putida KT2440 PP_4608 RNA polymerase sigma-70 factor, ECF subfamily insig. 34 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_21 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis sig. 35 76
  Pseudomonas fluorescens SBW25 PFLU_RS06940 sigma-70 family RNA polymerase sigma factor insig. 31 91
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06940 sigma-70 family RNA polymerase sigma factor sig. 31 91
  Azospirillum brasilense Sp245 AZOBR_RS27315 RNA polymerase sigma 70 insig. 35 82
o Caulobacter crescentus NA1000 CCNA_02790 RNA polymerase ECF-type sigma factor insig. 35 85
o Caulobacter crescentus NA1000 Δfur CCNA_02790 RNA polymerase ECF-type sigma factor cofit 35 85
o Pseudomonas fluorescens FW300-N2E3 AO353_04915 RNA polymerase subunit sigma-24 insig. 34 85
  Pseudomonas fluorescens SBW25 PFLU_RS28550 RNA polymerase sigma factor insig. 30 86
  Pseudomonas fluorescens SBW25-INTG PFLU_RS28550 RNA polymerase sigma factor insig. 30 86
  Pseudomonas sp. RS175 PFR28_02867 putative RNA polymerase sigma factor FecI insig. 34 76
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS00265 RNA polymerase sigma-70 factor insig. 32 87
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2727 FIG006045: Sigma factor, ECF subfamily insig. 31 88
  Pseudomonas fluorescens GW456-L13 PfGW456L13_2394 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 34 80
  Variovorax sp. SCN45 GFF1525 RNA polymerase ECF-type sigma factor insig. 33 84
  Pseudomonas simiae WCS417 PS417_06880 RNA polymerase sigma factor insig. 33 91
  Dechlorosoma suillum PS Dsui_1673 RNA polymerase sigma factor, sigma-70 family no data 33 76
  Pseudomonas sp. RS175 PFR28_02540 putative RNA polymerase sigma factor FecI insig. 36 76
  Dechlorosoma suillum PS Dsui_0621 RNA polymerase sigma factor, sigma-70 family insig. 35 78
o Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS03310 RNA polymerase sigma factor insig. 33 87
  Bacteroides ovatus ATCC 8483 BACOVA_04866 RNA polymerase sigma-70 factor insig. 34 80
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2900 FIG006045: Sigma factor, ECF subfamily insig. 33 83
  Pseudomonas simiae WCS417 PS417_24420 RNA polymerase sigma70 no data 34 81
o Pseudomonas fluorescens FW300-N2C3 AO356_05230 RNA polymerase subunit sigma-24 insig. 34 83
  Variovorax sp. SCN45 GFF2401 hypothetical protein insig. 32 88
  Sphingomonas koreensis DSMZ 15582 Ga0059261_2952 RNA polymerase sigma factor, sigma-70 family strong 29 92
  Pseudomonas fluorescens SBW25 PFLU_RS26350 RNA polymerase sigma factor insig. 34 80
  Pseudomonas fluorescens SBW25-INTG PFLU_RS26350 RNA polymerase sigma factor sig. 34 80
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1738 RNA polymerase sigma-54 factor RpoN insig. 31 90
  Pseudomonas putida KT2440 PP_4208 RNA polymerase sigma-70 factor, ECF subfamily strong 35 80
  Sphingomonas koreensis DSMZ 15582 Ga0059261_0421 RNA polymerase sigma factor, sigma-70 family insig. 40 77
  Azospirillum sp. SherDot2 MPMX19_03088 putative RNA polymerase sigma factor FecI insig. 34 77
  Bacteroides ovatus ATCC 8483 BACOVA_01066 hypothetical protein insig. 31 88
  Pseudomonas fluorescens SBW25 PFLU_RS05190 RNA polymerase sigma factor insig. 33 89
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05190 RNA polymerase sigma factor insig. 33 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS24305 hypothetical protein sig. 31 84
  Pseudomonas putida KT2440 PP_2192 putative RNA polymerase sigma-70 factor, ECF subfamily/transmembrane sensor protein insig. 34 83
  Pseudomonas fluorescens FW300-N2C3 AO356_21175 RNA polymerase subunit sigma strong 34 76
  Rhodanobacter denitrificans FW104-10B01 LRK54_RS09435 RNA polymerase sigma factor insig. 33 80
  Pseudomonas simiae WCS417 PS417_05120 RNA polymerase subunit sigma-24 insig. 33 89
  Pseudomonas simiae WCS417 PS417_22700 RNA polymerase subunit sigma-24 strong 32 83
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12435 hypothetical protein insig. 29 88
  Rhodopseudomonas palustris CGA009 TX73_016965 RNA polymerase sigma factor insig. 33 84
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_604 FIG006045: Sigma factor, ECF subfamily insig. 33 83
  Pseudomonas fluorescens GW456-L13 PfGW456L13_4951 FIG006045: Sigma factor, ECF subfamily insig. 32 88
  Pseudomonas syringae pv. syringae B728a Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 29 81
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4731 Sigma-70 region 2:Sigma-70 region 4 insig. 29 81
  Pseudomonas fluorescens FW300-N2C3 AO356_21710 RNA polymerase subunit sigma insig. 29 78
  Azospirillum brasilense Sp245 AZOBR_RS29160 putative RNA polymerase sigma-70 factor ECF subfamily insig. 32 73
  Azospirillum brasilense Sp245 AZOBR_RS26615 RNA polymerase insig. 31 83
  Pseudomonas simiae WCS417 PS417_00810 RNA polymerase sigma factor insig. 30 90
  Bacteroides thetaiotaomicron VPI-5482 BT0139 RNA polymerase ECF-type sigma factor (NCBI ptt file) sig. 29 74
  Pseudomonas fluorescens SBW25 PFLU_RS05170 sigma-70 family RNA polymerase sigma factor insig. 28 81
  Pseudomonas fluorescens SBW25-INTG PFLU_RS05170 sigma-70 family RNA polymerase sigma factor strong 28 81
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS06665 RNA polymerase sigma factor insig. 31 96
o Ralstonia solanacearum UW163 UW163_RS06960 RNA polymerase sigma factor insig. 31 96
  Phaeobacter inhibens DSM 17395 PGA1_c08510 RNA polymerase sigma factor (ECF01 subgroup, ECF20 subgroup) insig. 36 74
  Synechococcus elongatus PCC 7942 Synpcc7942_1923 sigG RNA polymerase sigma factor RpoE strong 33 75
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_29 Sigma-70 factor FpvI (ECF subfamily), controling pyoverdin biosynthesis @ FIG006045: Sigma factor, ECF subfamily insig. 30 89
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS17460 RNA polymerase sigma-70 factor insig. 27 90
  Alteromonas macleodii MIT1002 MIT1002_03920 putative RNA polymerase sigma factor FecI cofit 31 75
  Pseudomonas simiae WCS417 PS417_05100 RNA polymerase sigma factor sig. 29 81
  Pseudomonas simiae WCS417 PS417_11245 RNA polymerase subunit sigma-24 insig. 36 77
  Pseudomonas fluorescens FW300-N2C3 AO356_22495 RNA polymerase subunit sigma-24 insig. 34 76
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS05735 RNA polymerase sigma-70 factor insig. 31 85
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2098 heme uptake regulator insig. 28 78
  Pseudomonas fluorescens SBW25 PFLU_RS11840 RNA polymerase sigma factor insig. 36 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS11840 RNA polymerase sigma factor sig. 36 74
  Pseudomonas sp. RS175 PFR28_02859 putative RNA polymerase sigma factor FecI insig. 29 89
  Bacteroides ovatus ATCC 8483 BACOVA_01298 RNA polymerase sigma-70 factor insig. 27 75
  Variovorax sp. SCN45 GFF784 KEGG: RNA polymerase sigma-70 factor, ECF subfamily insig. 33 74
o Klebsiella michiganensis M5al BWI76_RS14070 ECF subfamily RNA polymerase sigma-24 subunit no data 31 81
  Pseudomonas fluorescens SBW25 PFLU_RS24340 sigma-70 family RNA polymerase sigma factor insig. 31 83
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24340 sigma-70 family RNA polymerase sigma factor strong 31 83
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS04645 sigma-70 family RNA polymerase sigma factor cofit 30 84
  Brevundimonas sp. GW460-12-10-14-LB2 A4249_RS02400 RNA polymerase sigma factor cofit 28 82
  Ralstonia solanacearum GMI1000 RS_RS14615 RNA polymerase sigma factor insig. 33 83
  Ralstonia solanacearum PSI07 RPSI07_RS10560 RNA polymerase sigma factor insig. 32 80
  Bacteroides ovatus ATCC 8483 BACOVA_03283 RNA polymerase sigma-70 factor insig. 32 84
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_398 FIG006045: Sigma factor, ECF subfamily insig. 33 76
  Pseudomonas putida KT2440 PP_0704 RNA polymerase sigma-70 factor, ECF subfamily strong 33 76
  Bacteroides thetaiotaomicron VPI-5482 BT4070 RNA polymerase ECF-type sigma factor (NCBI ptt file) insig. 32 80
  Pedobacter sp. GW460-11-11-14-LB5 CA265_RS12095 RNA polymerase subunit sigma-70 insig. 32 77