Homologs of Shew_2456 from Shewanella loihica PV-4

SMC domain-containing protein (RefSeq)
SEED: Exonuclease SbcC
KEGG: exonuclease SbcC

89 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_2456 SMC domain-containing protein (RefSeq) insig. 100 100
o Shewanella oneidensis MR-1 SO2843 exonuclease SbcC, putative (NCBI ptt file) insig. 51 100
o Shewanella sp. ANA-3 Shewana3_2611 exonuclease SbcC, putative (RefSeq) insig. 52 100
o Shewanella amazonensis SB2B Sama_1268 exonuclease SbcC, putative (RefSeq) sig. 45 100
o Vibrio cholerae E7946 ATCC 55056 CSW01_16845 nuclease SbcCD subunit C insig. 41 52
o Cupriavidus basilensis FW507-4G11 RR42_RS35930 DNA repair exonuclease insig. 45 29
o Bacteroides thetaiotaomicron VPI-5482 BT0245 ATP-dependent exonuclease sbcC (NCBI ptt file) sig. 26 98
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11105 ATP-binding cassette family protein insig. 39 22
  Azospirillum sp. SherDot2 MPMX19_04316 hypothetical protein insig. 43 17
  Pseudomonas sp. DMC3 GFF3026 hypothetical protein insig. 32 41
  Pseudomonas stutzeri RCH2 Psest_3540 hypothetical protein insig. 35 25
o Echinicola vietnamensis KMM 6221, DSM 17526 Echvi_1706 ATPase involved in DNA repair sig. 26 50
  Erwinia tracheiphila SCR3 LU632_RS18935 exonuclease subunit SbcC insig. 35 21
  Pseudomonas fluorescens FW300-N2E3 AO353_23675 chromosome segregation protein SMC insig. 40 17
  Dickeya dadantii 3937 DDA3937_RS05415 hypothetical protein strong 35 21
  Pseudomonas simiae WCS417 PS417_15120 chromosome segregation protein SMC strong 35 26
  Dickeya dianthicola 67-19 HGI48_RS05475 AAA family ATPase insig. 34 21
  Dickeya dianthicola ME23 DZA65_RS05800 AAA family ATPase insig. 34 21
  Pseudomonas sp. BP01 JOY50_RS16435 AAA family ATPase insig. 40 17
  Pseudomonas putida KT2440 PP_2024 Exonuclease SbcC sig. 40 17
  Pseudomonas aeruginosa PA14 IKLFDK_02700 Nuclease SbcCD subunit C insig. 37 18
  Alteromonas macleodii MIT1002 MIT1002_00898 Nuclease SbcCD subunit C cofit 27 52
  Pseudomonas sp. RS175 PFR28_01588 hypothetical protein insig. 31 40
  Pseudomonas fluorescens SBW25 PFLU_RS17140 AAA family ATPase insig. 40 17
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17140 AAA family ATPase sig. 40 17
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3308 Exonuclease SbcC strong 40 17
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4632 Exonuclease SbcC insig. 40 17
  Klebsiella michiganensis M5al BWI76_RS06220 exonuclease subunit SbcC sig. 33 28
  Pseudomonas syringae pv. syringae B728a Psyr_1714 exonuclease SbcC insig. 32 28
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1714 exonuclease SbcC insig. 32 28
  Alteromonas macleodii MIT1002 MIT1002_00898 Nuclease SbcCD subunit C cofit 32 28
  Dickeya dianthicola ME23 DZA65_RS05800 AAA family ATPase insig. 31 29
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_618 Exonuclease SbcC insig. 39 17
  Pseudomonas fluorescens FW300-N2C3 AO356_24625 chromosome segregation protein SMC insig. 32 41
  Pectobacterium carotovorum WPP14 HER17_RS16050 AAA family ATPase insig. 34 21
  Pantoea sp. MT58 IAI47_14865 AAA family ATPase insig. 36 18
  Pseudomonas sp. SVBP6 COO64_RS05455 AAA family ATPase insig. 37 17
  Serratia liquefaciens MT49 IAI46_04765 exonuclease subunit SbcC insig. 31 29
  Dickeya dianthicola 67-19 HGI48_RS05475 AAA family ATPase insig. 30 29
  Dickeya dadantii 3937 DDA3937_RS05415 hypothetical protein strong 30 29
  Escherichia coli ECRC62 BNILDI_22900 sbcC exonuclease subunit SbcC cofit 33 28
  Erwinia tracheiphila SCR3 LU632_RS18935 exonuclease subunit SbcC insig. 32 29
  Enterobacter asburiae PDN3 EX28DRAFT_2577 exonuclease SbcC insig. 38 16
  Acinetobacter radioresistens SK82 MPMX26_02403 hypothetical protein cofit 34 18
  Erwinia amylovora T8 OLJFJH_18195 exonuclease subunit SbcC insig. 35 20
  Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_03279 Nuclease SbcCD subunit C insig. 32 28
  Escherichia coli ECOR27 NOLOHH_01485 sbcC exonuclease subunit SbcC cofit 32 28
  Escherichia coli ECRC100 OKFHMN_08555 sbcC exonuclease subunit SbcC cofit 32 28
  Escherichia coli ECRC101 MCAODC_27780 sbcC exonuclease subunit SbcC insig. 32 28
  Escherichia coli ECRC102 NIAGMN_06610 sbcC exonuclease subunit SbcC sig. 32 28
  Escherichia coli ECRC98 JDDGAC_12210 sbcC exonuclease subunit SbcC cofit 32 28
  Escherichia coli ECRC99 KEDOAH_19410 sbcC exonuclease subunit SbcC no data 32 28
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF4293 Exonuclease SbcC insig. 32 28
  Enterobacter sp. TBS_079 MPMX20_00984 Nuclease SbcCD subunit C insig. 37 16
  Pseudomonas fluorescens FW300-N2E3 AO353_23675 chromosome segregation protein SMC insig. 34 18
  Pseudomonas stutzeri RCH2 Psest_3540 hypothetical protein insig. 32 20
  Escherichia coli BL21 ECD_00345 exonuclease, dsDNA, ATP-dependent insig. 36 17
  Escherichia fergusonii Becca EFB2_03660 Nuclease SbcCD subunit C insig. 36 17
  Escherichia coli ECOR38 HEPCGN_07195 sbcC exonuclease subunit SbcC insig. 36 17
  Escherichia coli Nissle 1917 ECOLIN_RS02400 exonuclease subunit SbcC insig. 36 17
  Escherichia coli BW25113 b0397 sbcC exonuclease, dsDNA, ATP-dependent (NCBI) sig. 36 17
  Rahnella sp. WP5 EX31_RS22030 exonuclease subunit SbcC insig. 36 16
  Phocaeicola dorei CL03T12C01 ABI39_RS02540 AAA family ATPase insig. 35 20
  Pectobacterium carotovorum WPP14 HER17_RS16050 AAA family ATPase insig. 40 17
  Parabacteroides merdae CL09T00C40 HMPREF1078_RS09925 AAA family ATPase insig. 34 21
  Phocaeicola vulgatus CL09T03C04 HMPREF1058_RS08345 AAA family ATPase insig. 35 20
  Pseudomonas aeruginosa PA14 IKLFDK_02700 Nuclease SbcCD subunit C insig. 32 18
  Pseudomonas fluorescens FW300-N2C3 AO356_24625 chromosome segregation protein SMC insig. 31 20
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_4632 Exonuclease SbcC insig. 33 18
  Pseudomonas sp. RS175 PFR28_01588 hypothetical protein insig. 33 18
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_618 Exonuclease SbcC insig. 33 18
  Pseudomonas fluorescens GW456-L13 PfGW456L13_3308 Exonuclease SbcC strong 33 18
  Pseudomonas sp. DMC3 GFF3026 hypothetical protein insig. 33 18
  Pseudomonas simiae WCS417 PS417_15120 chromosome segregation protein SMC strong 31 20
  Pantoea sp. MT58 IAI47_14865 AAA family ATPase insig. 35 17
  Pseudomonas fluorescens SBW25 PFLU_RS17140 AAA family ATPase insig. 31 20
  Pseudomonas fluorescens SBW25-INTG PFLU_RS17140 AAA family ATPase sig. 31 20
  Pseudomonas sp. SVBP6 COO64_RS05455 AAA family ATPase insig. 33 18
  Pseudomonas sp. BP01 JOY50_RS16435 AAA family ATPase insig. 29 40
  Pseudomonas putida KT2440 PP_2024 Exonuclease SbcC sig. 31 19
  Bacteroides ovatus ATCC 8483 BACOVA_00395 exonuclease SbcCD, C subunit insig. 25 49
  Pontibacter actiniarum KMM 6156, DSM 19842 CA264_11105 ATP-binding cassette family protein insig. 31 19
  Pseudomonas syringae pv. syringae B728a Psyr_1714 exonuclease SbcC insig. 30 18
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_1714 exonuclease SbcC insig. 30 18
  Azospirillum sp. SherDot2 MPMX19_04316 hypothetical protein insig. 32 18
  Acinetobacter radioresistens SK82 MPMX26_02403 hypothetical protein cofit 30 18
  Synechocystis sp000284455 PCC 6803 SGL_RS04230 exonuclease subunit SbcC insig. 25 20
  Pseudomonas sp. S08-1 OH686_22940 ATPase insig. 28 14
  Methanococcus maripaludis JJ MMJJ_RS07435 SMC family ATPase cofit 31 11