Homologs of Shew_1614 from Shewanella loihica PV-4

cold-shock DNA-binding domain-containing protein (RefSeq)
KEGG: cold shock protein (beta-ribbon, CspA family)

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_1614 cold-shock DNA-binding domain-containing protein (RefSeq) no data 100 100
o Shewanella sp. ANA-3 Shewana3_2569 cold-shock DNA-binding protein family protein (RefSeq) no data 99 100
o Shewanella oneidensis MR-1 SO2787 cold shock domain family protein (NCBI ptt file) no data 99 100
o Shewanella amazonensis SB2B Sama_1970 cold-shock DNA-binding domain-containing protein (RefSeq) no data 93 100
o Kangiella aquimarina DSM 16071 B158DRAFT_1310 Cold shock proteins insig. 74 96
o Vibrio cholerae E7946 ATCC 55056 CSW01_14910 cold-shock protein insig. 70 99
o Marinobacter adhaerens HP15 HP15_861 cold shock, CspA cofit 74 100
  Kangiella aquimarina DSM 16071 B158DRAFT_1826 Cold shock proteins strong 71 100
  Marinobacter adhaerens HP15 HP15_3373 cold shock, CspA no data 71 100
  Shewanella oneidensis MR-1 SO1648 cold shock domain family protein (NCBI ptt file) insig. 72 100
  Marinobacter adhaerens HP15 HP15_2054 cold shock, CspA insig. 73 94
o Pseudomonas aeruginosa MRSN321 DY961_RS22270 cold-shock protein strong 72 100
o Pseudomonas aeruginosa PA14 IKLFDK_23150 cold-shock protein strong 72 100
o Pseudomonas aeruginosa PUPa3 DQ20_RS37050 cold-shock protein strong 72 100
  Alteromonas macleodii MIT1002 MIT1002_03628 Cold shock-like protein CspG cofit 68 100
o Acinetobacter radioresistens SK82 MPMX26_01347 Cold shock protein CspV insig. 68 96
  Shewanella loihica PV-4 Shew_1165 cold-shock DNA-binding domain-containing protein (RefSeq) no data 74 96
  Marinobacter adhaerens HP15 HP15_2835 cold shock, CspA cofit 71 96
o Pseudomonas sp. S08-1 OH686_05655 Cold shock protein of CSP family no data 66 94
o Pseudomonas sp. RS175 PFR28_00498 Cold shock protein CapB insig. 70 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04142 putative cold shock protein A no data 70 96
o Pseudomonas simiae WCS417 PS417_19715 cold-shock protein no data 70 96
o Pseudomonas fluorescens SBW25 PFLU_RS21685 cold-shock protein insig. 68 96
o Pseudomonas fluorescens SBW25-INTG PFLU_RS21685 cold-shock protein sig. 68 96
  Alteromonas macleodii MIT1002 MIT1002_01248 Cold shock-like protein CspG insig. 70 97
o Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.3498.1 hypothetical protein strong 70 94
o Rhodanobacter denitrificans MT42 LRK55_RS14490 cold-shock protein cofit 70 93
o Rhodanobacter denitrificans FW104-10B01 LRK54_RS14775 cold-shock protein strong 70 93
o Rhodanobacter sp000427505 FW510-R12 LRK53_RS13820 cold-shock protein insig. 70 93
  Pseudomonas fluorescens SBW25 PFLU_RS06435 cold-shock protein no data 69 94
  Pseudomonas fluorescens SBW25-INTG PFLU_RS06435 cold-shock protein no data 69 94
o Pseudomonas sp. DMC3 GFF2138 Cold shock protein CapB cofit 69 94
  Pseudomonas lactucae CFBP13502 GEMAOFIL_01444 Cold shock protein CapB cofit 69 94
o Pseudomonas orientalis W4I3 QF045_RS09215 cold-shock protein insig. 69 94
o Pseudomonas syringae pv. syringae B728a Psyr_3884 cold-shock DNA-binding protein family no data 69 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_3884 cold-shock DNA-binding protein family no data 69 94
  Pseudomonas simiae WCS417 PS417_06370 cold-shock protein strong 69 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_4642 Cold shock protein CspA insig. 69 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_3171 Cold shock protein CspA no data 69 94
o Pseudomonas fluorescens FW300-N2E3 AO353_16935 cold-shock protein no data 69 94
o Pseudomonas fluorescens FW300-N2C3 AO356_05540 cold-shock protein sig. 69 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_2967 Cold shock protein CspA strong 69 94
o Escherichia coli BL21 ECD_03406 RNA chaperone and antiterminator, cold-inducible no data 64 97
o Escherichia fergusonii Becca EFB2_00251 Cold shock protein CspA insig. 64 97
o Escherichia coli ECOR27 NOLOHH_07950 cspA Major cold shock protein insig. 64 97
o Escherichia coli ECOR38 HEPCGN_14895 cspA Major cold shock protein insig. 64 97
o Escherichia coli ECRC100 OKFHMN_16005 cspA Major cold shock protein no data 64 97
o Escherichia coli ECRC101 MCAODC_06520 cspA Major cold shock protein insig. 64 97
o Escherichia coli ECRC102 NIAGMN_13765 cspA Major cold shock protein insig. 64 97
o Escherichia coli ECRC62 BNILDI_03595 cspA Major cold shock protein cofit 64 97
o Escherichia coli ECRC98 JDDGAC_19635 cspA Major cold shock protein insig. 64 97
o Escherichia coli ECRC99 KEDOAH_12145 cspA Major cold shock protein no data 64 97
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00150 Cold shock protein CspA insig. 64 97
o Escherichia coli Nissle 1917 ECOLIN_RS20345 RNA chaperone/antiterminator CspA insig. 64 97
o Escherichia coli BW25113 b3556 cspA major cold shock protein (NCBI) no data 64 97
o Klebsiella pneumoniae MKP103 KDGMDA_07710 Major cold shock protein insig. 64 97
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF454 Cold shock protein CspA insig. 64 97
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS00530 cold-shock protein insig. 72 90
  Pseudomonas sp. S08-1 OH686_17410 Cold shock protein of CSP family no data 67 94
o Pseudomonas stutzeri RCH2 Psest_3045 Cold shock proteins sig. 69 94
  Shewanella amazonensis SB2B Sama_2963 cold-shock DNA-binding domain-containing protein (RefSeq) insig. 69 97
  Pseudomonas stutzeri RCH2 Psest_1239 Cold shock proteins no data 66 94
  Pseudomonas sp. S08-1 OH686_06580 Cold shock protein of CSP family insig. 63 94
o Pseudomonas segetis P6 ACVTMO_RS07240 cold-shock protein sig. 67 94
o Enterobacter asburiae PDN3 EX28DRAFT_2409 Cold shock proteins no data 65 99
  Pseudomonas sp. S08-1 OH686_20120 Cold shock protein of CSP family no data 67 94
o Pseudomonas sp. SVBP6 COO64_RS16925 cold-shock protein insig. 67 94
  Acinetobacter radioresistens SK82 MPMX26_01659 Cold shock-like protein CspG insig. 65 96
o Pantoea agglomerans CFBP13505 P0401 PagCFBP13505_RS20805 RNA chaperone/antiterminator CspA cofit 64 97
  Rahnella sp. WP5 EX31_RS23030 transcription antiterminator/RNA stability regulator CspE sig. 64 100
  Pseudomonas aeruginosa MRSN321 DY961_RS06625 cold-shock protein no data 63 94
  Pseudomonas aeruginosa PA14 IKLFDK_05365 cold shock domain protein CspD strong 63 94
  Pseudomonas aeruginosa PUPa3 DQ20_RS46175 cold-shock protein strong 63 94
o Lysobacter sp. OAE881 ABIE51_RS12600 cold-shock protein insig. 72 90
  Pseudomonas segetis P6 ACVTMO_RS17375 cold-shock protein sig. 68 93
o Enterobacter sp. TBS_079 MPMX20_02529 Cold shock protein CspA sig. 63 99
o Erwinia tracheiphila HP pepo 2.2 IJEDHG_26210 cspC cold-shock protein no data 63 99
o Erwinia tracheiphila SCR3 LU632_RS19015 cspA RNA chaperone/antiterminator CspA insig. 63 99
  Pseudomonas sp. RS175 PFR28_03386 Major cold shock protein CspA sig. 68 96
  Pseudomonas sp. SVBP6 COO64_RS04435 cold-shock protein insig. 68 96
  Lysobacter sp. OAE881 ABIE51_RS18590 cold-shock protein no data 67 94
  Vibrio cholerae E7946 ATCC 55056 CSW01_14830 cold-shock protein CspA no data 67 100
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5555 Cold shock protein CspA sig. 66 99
  Erwinia tracheiphila SCR3 LU632_RS16440 cspE transcription antiterminator/RNA stability regulator CspE no data 64 100
o Erwinia amylovora T8 OLJFJH_17275 transcription antiterminator/RNA stability regulator CspE no data 64 100
o Rhodanobacter sp. FW510-T8 OKGIIK_03595 cspC cold-shock protein no data 70 90
  Pseudomonas fluorescens SBW25 PFLU_RS24015 cold-shock protein strong 69 90
  Pseudomonas fluorescens SBW25-INTG PFLU_RS24015 cold-shock protein strong 69 90
  Pseudomonas lactucae CFBP13502 GEMAOFIL_04611 Major cold shock protein CspA cofit 68 96
  Pseudomonas fluorescens GW456-L13 PfGW456L13_1865 Cold shock protein CspA insig. 68 96
  Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_624 Cold shock protein CspA no data 68 96
  Pseudomonas fluorescens FW300-N2C3 AO356_18155 cold-shock protein strong 68 96
o Klebsiella michiganensis M5al BWI76_RS26980 cold-shock protein sig. 63 97
  Pseudomonas sp. SVBP6 COO64_RS19570 cold-shock protein insig. 63 94
  Enterobacter asburiae PDN3 EX28DRAFT_3819 Cold shock proteins no data 62 99
  Rhodanobacter sp000427505 FW510-R12 LRK53_RS13825 cold-shock protein no data 70 90
  Pseudomonas sp. DMC3 GFF5172 Major cold shock protein CspA cofit 69 90
  Rhodanobacter sp. FW510-T8 OKGIIK_03600 cspC cold-shock protein sig. 68 93
  Dickeya dadantii 3937 DDA3937_RS06115 transcription antiterminator/RNA stability regulator CspE no data 64 100
  Dickeya dianthicola 67-19 HGI48_RS06165 transcription antiterminator/RNA stability regulator CspE no data 64 100