Homologs of Shew_0101 from Shewanella loihica PV-4

endoribonuclease L-PSP (RefSeq)
SEED: Bona fide RidA/YjgF/TdcF/RutC subgroup

73 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella loihica PV-4 Shew_0101 endoribonuclease L-PSP (RefSeq) insig. 100 100
o Xanthobacter sp. DMC5 GFF465 Putative aminoacrylate peracid reductase RutC insig. 43 83
  Bosea sp. OAE506 ABIE41_RS06350 RidA family protein insig. 31 92
  Dinoroseobacter shibae DFL-12 Dshi_1385 Endoribonuclease L-PSP (RefSeq) insig. 36 97
  Acinetobacter baumannii LAC-4 RR41_RS16150 RidA family protein insig. 39 62
  Azospirillum brasilense Sp245 AZOBR_RS30935 hypothetical protein insig. 36 74
  Sinorhizobium meliloti 1021 SM_b20118 hypothetical protein insig. 35 84
  Sinorhizobium meliloti 1021 SM_b21123 translation initiation inhibitor insig. 30 87
  Ralstonia solanacearum PSI07 RPSI07_RS14130 RidA family protein insig. 41 74
  Ralstonia solanacearum GMI1000 RS_RS23495 RidA family protein no data 40 74
  Ralstonia solanacearum GMI1000 RS_RS23625 RidA family protein no data 40 74
  Castellaniella sp019104865 MT123 ABCV34_RS03565 Rid family detoxifying hydrolase no data 32 67
  Pseudomonas simiae WCS417 PS417_17935 endoribonuclease L-PSP insig. 29 99
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01079 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 36 50
  Pseudomonas fluorescens FW300-N2C3 AO356_22385 enamine deaminase RidA insig. 39 41
  Ralstonia solanacearum UW163 UW163_RS18330 RidA family protein insig. 40 74
  Ralstonia sp. UNC404CL21Col ABZR87_RS05790 RidA family protein insig. 34 70
  Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_347 Endoribonuclease L-PSP insig. 37 41
  Pseudomonas sp. SVBP6 COO64_RS08195 RidA family protein insig. 34 92
  Pseudomonas segetis P6 ACVTMO_RS20125 RidA family protein insig. 39 41
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01492 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 33 72
  Rhodopseudomonas palustris CGA009 TX73_013730 RidA family protein insig. 29 93
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS09760 RidA family protein insig. 38 46
  Pseudomonas putida KT2440 PP_3522 conserved protein of unknown function insig. 34 97
  Burkholderia phytofirmans PsJN BPHYT_RS07260 2-aminomuconate deaminase no data 33 66
  Sinorhizobium meliloti 1021 SMc01714 hypothetical protein insig. 33 60
  Dechlorosoma suillum PS Dsui_3425 putative translation initiation inhibitor, yjgF family no data 32 61
  Variovorax sp. OAS795 ABID97_RS28685 RidA family protein insig. 37 41
  Azospirillum sp. SherDot2 MPMX19_03874 hypothetical protein insig. 37 62
  Pseudomonas stutzeri RCH2 Psest_3002 Putative translation initiation inhibitor, yjgF family insig. 34 40
  Phaeobacter inhibens DSM 17395 PGA1_c12800 endoribonuclease-like protein no data 30 86
  Magnetospirillum magneticum AMB-1 AMB_RS19400 RidA family protein insig. 28 89
  Klebsiella michiganensis M5al BWI76_RS18475 hypothetical protein insig. 39 41
  Cupriavidus basilensis FW507-4G11 RR42_RS05085 2-aminomuconate deaminase strong 33 66
  Variovorax sp. SCN45 GFF138 RidA/YER057c/UK114 superfamily, group 7, YjgH-like protein insig. 35 41
  Pseudomonas simiae WCS417 PS417_07990 endoribonuclease L-PSP insig. 32 74
  Sinorhizobium meliloti 1021 SM_b20376 hypothetical protein insig. 35 60
  Rhizobium sp. OAE497 ABIE40_RS04205 RidA family protein insig. 32 49
  Herbaspirillum seropedicae SmR1 HSERO_RS06570 endoribonuclease L-PSP insig. 36 50
  Acinetobacter radioresistens SK82 MPMX26_02797 2-iminobutanoate/2-iminopropanoate deaminase strong 36 56
  Pseudomonas fluorescens SBW25 PFLU_RS20985 RidA family protein insig. 33 74
  Pseudomonas fluorescens SBW25-INTG PFLU_RS20985 RidA family protein insig. 33 74
  Pseudomonas simiae WCS417 PS417_18945 endoribonuclease insig. 33 74
  Pseudomonas stutzeri RCH2 Psest_3818 endoribonuclease L-PSP, putative strong 32 66
  Ralstonia solanacearum IBSBF1503 RALBFv3_RS16635 RidA family protein insig. 37 56
  Ralstonia solanacearum UW163 UW163_RS17990 RidA family protein insig. 37 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS16565 RidA family protein no data 32 78
  Acinetobacter baumannii LAC-4 RR41_RS04140 RidA family protein insig. 31 49
  Pseudomonas orientalis W4I3 QF045_RS19835 RidA family protein insig. 28 86
  Klebsiella pneumoniae MKP103 KDGMDA_25720 RidA family protein sig. 37 41
  Ralstonia solanacearum GMI1000 RS_RS24425 RidA family protein insig. 37 56
  Ralstonia sp. UNC404CL21Col ABZR87_RS16800 RidA family protein insig. 33 41
  Agrobacterium fabrum C58 Atu1475 hypothetical protein insig. 40 40
  Pseudomonas aeruginosa PA14 IKLFDK_07500 RidA family protein strong 33 74
  Pseudomonas aeruginosa MRSN321 DY961_RS28350 RidA family protein insig. 36 40
  Pseudomonas aeruginosa PA14 IKLFDK_21515 RidA family protein insig. 36 40
  Serratia liquefaciens MT49 IAI46_05760 RidA family protein insig. 34 64
  Dyella japonica UNC79MFTsu3.2 ABZR86_RS08910 RidA family protein insig. 39 52
  Pantoea agglomerans CFBP13505 P0401 PagCFBP13516_RS21805 RidA family protein cofit 38 40
  Dinoroseobacter shibae DFL-12 Dshi_1985 aldo/keto reductase (RefSeq) insig. 36 64
  Cupriavidus basilensis FW507-4G11 RR42_RS30085 hypothetical protein insig. 30 47
  Paraburkholderia graminis OAS925 ABIE53_001473 enamine deaminase RidA (YjgF/YER057c/UK114 family) insig. 36 40
  Pseudomonas aeruginosa MRSN321 DY961_RS19480 RidA family protein insig. 33 73
  Pseudomonas aeruginosa PUPa3 DQ20_RS53600 RidA family protein sig. 33 73
  Dechlorosoma suillum PS Dsui_0312 endoribonuclease L-PSP, putative no data 31 63
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4943 Bona fide RidA/YjgF/TdcF/RutC subgroup no data 30 76
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04942 Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family insig. 35 72
  Paraburkholderia graminis OAS925 ABIE53_001518 enamine deaminase RidA (YjgF/YER057c/UK114 family) sig. 35 72
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF808 Bona fide RidA/YjgF/TdcF/RutC subgroup insig. 29 75
  Xanthomonas campestris pv. campestris strain 8004 Xcc-8004.4708.1 Putative translation initiation inhibitor, yjgF family insig. 38 40
  Ralstonia solanacearum PSI07 RPSI07_RS06815 RidA family protein insig. 36 56
  Burkholderia phytofirmans PsJN BPHYT_RS29300 endoribonuclease L-PSP insig. 34 60
  Pseudomonas sp. RS175 PFR28_02561 RutC family protein YjgH insig. 33 41