Orth | Species | Gene | Name | Description | Fitness | %Id | Cov |
| Shewanella oneidensis MR-1 | SO4656.2 | | conserved hypothetical protein (NCBI ptt file) | insig. | 100 | 100 |
| Shewanella sp. ANA-3 | Shewana3_4029 | | diguanylate cyclase/phosphodiesterase with PAS/PAC and Chase sensor(s) (RefSeq) | cofit | 79 | 100 |
| Magnetospirillum magneticum AMB-1 | AMB_RS17135 | | PAS domain-containing sensor histidine kinase | cofit | 47 | 20 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_2345 | | CHASE domain/PAS domain protein | insig. | 27 | 61 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_00770 | | nucleotide cyclase | insig. | 34 | 27 |
| Acidovorax sp. GW101-3H11 | Ac3H11_2319 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 24 | 67 |
| Magnetospirillum magneticum AMB-1 | AMB_RS15005 | | two-component system response regulator | insig. | 33 | 26 |
| Pseudomonas sp. RS175 | PFR28_01056 | | hypothetical protein | insig. | 27 | 59 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2110 | | diguanylate cyclase with PAS/PAC sensor | insig. | 29 | 31 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2110 | | diguanylate cyclase with PAS/PAC sensor | insig. | 29 | 31 |
| Pseudomonas syringae pv. syringae B728a | Psyr_4642 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 30 | 24 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_4642 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) | insig. | 30 | 24 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_2512 | | sensory box/GGDEF domain/EAL domain protein | insig. | 31 | 26 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_07390 | | diguanylate cyclase | insig. | 28 | 26 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_4790 | | sensory box/GGDEF domain/EAL domain protein | sig. | 30 | 26 |
| Pseudomonas putida KT2440 | PP_0386 | | Sensory box protein | sig. | 31 | 26 |
| Dechlorosoma suillum PS | Dsui_1429 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 32 | 26 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_14260 | | diguanylate cyclase | insig. | 29 | 26 |
| Pseudomonas fluorescens SBW25 | PFLU_RS22540 | | GGDEF domain-containing protein | insig. | 28 | 31 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS22540 | | GGDEF domain-containing protein | insig. | 28 | 31 |
| Pseudomonas simiae WCS417 | PS417_25885 | | diguanylate cyclase | insig. | 28 | 27 |
| Pseudomonas sp. RS175 | PFR28_04079 | | Membrane-bound lytic murein transglycosylase F | insig. | 30 | 24 |
| Magnetospirillum magneticum AMB-1 | AMB_RS23985 | | signal transduction histidine kinase | insig. | 26 | 38 |
| Pseudomonas sp. S08-1 | OH686_06285 | | Two-component system sensor histidine kinase | insig. | 22 | 78 |
| Pseudomonas sp. S08-1 | OH686_07355 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 32 | 26 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_1185 | | sensory box/GGDEF domain/EAL domain protein | insig. | 28 | 26 |
| Pseudomonas sp. S08-1 | OH686_14965 | | Sensory box/GGDEF family protein | cofit | 28 | 26 |
| Pseudomonas fluorescens FW300-N2E3 | AO353_20610 | | histidine kinase | insig. | 27 | 28 |
| Pseudomonas fluorescens SBW25 | PFLU_RS27540 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 27 | 27 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS27540 | | bifunctional diguanylate cyclase/phosphodiesterase | insig. | 27 | 27 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_02600 | | nucleotide cyclase | insig. | 32 | 28 |
| Acidovorax sp. GW101-3H11 | Ac3H11_4486 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 30 | 29 |
| Rhodospirillum rubrum S1H | Rru_A2406 | | Putative diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) and Response Regulator Receiver modulation (NCBI) | insig. | 32 | 26 |
| Herbaspirillum seropedicae SmR1 | HSERO_RS12780 | | diguanylate phosphodiesterase | sig. | 24 | 56 |
| Pseudomonas simiae WCS417 | PS417_20925 | | nucleotide cyclase | insig. | 27 | 31 |
| Pseudomonas fluorescens SBW25 | PFLU_RS20590 | | EAL domain-containing protein | insig. | 27 | 30 |
| Pseudomonas fluorescens SBW25-INTG | PFLU_RS20590 | | EAL domain-containing protein | insig. | 27 | 30 |
| Dechlorosoma suillum PS | Dsui_2046 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 31 | 22 |
| Dechlorosoma suillum PS | Dsui_2125 | | PAS domain S-box | insig. | 34 | 25 |
| Rhodanobacter denitrificans MT42 | LRK55_RS08620 | | GGDEF and EAL domain-containing protein | cofit | 32 | 26 |
| Magnetospirillum magneticum AMB-1 | AMB_RS11375 | | GGDEF domain-containing protein | insig. | 29 | 27 |
| Acidovorax sp. GW101-3H11 | Ac3H11_448 | | Sensory box/GGDEF family protein | insig. | 24 | 56 |
| Dechlorosoma suillum PS | Dsui_0894 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 33 | 27 |
| Burkholderia phytofirmans PsJN | BPHYT_RS33250 | | diguanylate phosphodiesterase | insig. | 24 | 72 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_60 | | Sensory box/GGDEF family protein | insig. | 25 | 30 |
| Rhodanobacter denitrificans FW104-10B01 | LRK54_RS09090 | | GGDEF and EAL domain-containing protein | insig. | 31 | 26 |
| Pseudomonas simiae WCS417 | PS417_18610 | | histidine kinase | sig. | 26 | 27 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_17 | | Sensory box/GGDEF family protein | insig. | 25 | 27 |
| Azospirillum brasilense Sp245 | AZOBR_RS04390 | | signal peptide protein | cofit | 35 | 15 |
| Dechlorosoma suillum PS | Dsui_1501 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 32 | 21 |
| Pseudomonas fluorescens FW300-N2C3 | AO356_21390 | | histidine kinase | insig. | 25 | 29 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU0422 | | sensory box/GGDEF domain/EAL domain protein (TIGR) | insig. | 30 | 30 |
| Rhodanobacter sp. FW510-T8 | OKGIIK_15575 | | Diguanylate cyclase | cofit | 30 | 26 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_3950 | | Sensory box/GGDEF family protein | insig. | 25 | 27 |
| Shewanella sp. ANA-3 | Shewana3_3543 | | diguanylate cyclase with PAS/PAC sensor (RefSeq) | insig. | 30 | 27 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS00645 | | PAS domain-containing protein | insig. | 32 | 21 |
| Castellaniella sp019104865 MT123 | ABCV34_RS15320 | | diguanylate cyclase | insig. | 29 | 29 |
| Pseudomonas fluorescens FW300-N1B4 | Pf1N1B4_3845 | | CHASE domain/PAS domain protein | insig. | 27 | 30 |
| Pseudomonas putida KT2440 | PP_1983 | | PAS/PAC/GAF sensor-containing diguanylate cyclase/phosphodiesterase | insig. | 27 | 28 |
| Pseudomonas sp. RS175 | PFR28_02826 | | hypothetical protein | strong | 25 | 30 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | GFF5581 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | cofit | 33 | 22 |
| Cupriavidus basilensis FW507-4G11 | RR42_RS10125 | | diguanylate phosphodiesterase | insig. | 23 | 75 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVUA0087 | | sensory box histidine kinase (TIGR) | insig. | 29 | 22 |
| Magnetospirillum magneticum AMB-1 | AMB_RS09950 | | GGDEF domain-containing protein | cofit | 25 | 25 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_4092 | | CHASE domain/PAS domain protein | insig. | 24 | 47 |
| Marinobacter adhaerens HP15 | HP15_4115 | | sensory box/GGDEF/EAL family protein | cofit | 30 | 24 |
| Lysobacter sp. OAE881 | ABIE51_RS14705 | | phosphodiesterase | insig. | 30 | 19 |
| Desulfovibrio vulgaris Hildenborough JW710 | DVU3068 | | GAF domain/sensory box/EAL domain protein (TIGR) | insig. | 26 | 30 |
| Escherichia coli ECOR27 | NOLOHH_15605 | dgcE | diguanylate cyclase | cofit | 32 | 22 |
| Pseudomonas sp. S08-1 | OH686_04490 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 28 | 21 |
| Kangiella aquimarina DSM 16071 | B158DRAFT_2394 | | diguanylate cyclase (GGDEF) domain | strong | 27 | 24 |
| Escherichia fergusonii Becca | EFB2_01787 | | putative diguanylate cyclase DgcE | insig. | 32 | 22 |
| Pseudomonas sp. S08-1 | OH686_13050 | | Sensory box/GGDEF family protein | cofit | 40 | 12 |
| Escherichia coli ECRC62 | BNILDI_14510 | dgcE | diguanylate cyclase | insig. | 32 | 22 |
| Escherichia coli BL21 | ECD_01973 | | putative diguanylate cyclase | insig. | 32 | 22 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_1530 | | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) (RefSeq) | insig. | 30 | 25 |
| Escherichia coli BW25113 | b2067 | yegE | predicted diguanylate cyclase, GGDEF domain signalling protein (NCBI) | sig. | 32 | 22 |
| Pseudomonas fluorescens GW456-L13 | PfGW456L13_725 | | Sensory box/GGDEF family protein | insig. | 31 | 19 |
| Marinobacter adhaerens HP15 | HP15_3980 | | diguanylate cyclase/phosphodiesterase | insig. | 30 | 20 |
| Pseudomonas sp. S08-1 | OH686_11550 | | diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) | insig. | 26 | 31 |
| Escherichia coli ECRC101 | OKFHMN_24260 | mASE1 | diguanylate cyclase | insig. | 32 | 22 |
| Escherichia coli ECRC102 | NIAGMN_22205 | mASE1 | diguanylate cyclase | insig. | 32 | 22 |
| Escherichia coli ECRC98 | JDDGAC_28370 | mASE1 | diguanylate cyclase | no data | 32 | 22 |
| Escherichia coli ECRC99 | KEDOAH_03890 | mASE1 | diguanylate cyclase | no data | 32 | 22 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | OHPLBJKB_01638 | | putative diguanylate cyclase DgcE | insig. | 32 | 22 |
| Escherichia coli ECRC101 | MCAODC_20680 | mASE1 | diguanylate cyclase | insig. | 32 | 22 |
| Magnetospirillum magneticum AMB-1 | AMB_RS17220 | | GGDEF domain-containing protein | insig. | 28 | 23 |
| Azospirillum sp. SherDot2 | MPMX19_04641 | | hypothetical protein | insig. | 26 | 24 |
| Escherichia coli ECOR38 | HEPCGN_02965 | mASE1 | diguanylate cyclase | cofit | 32 | 22 |
| Desulfovibrio vulgaris Miyazaki F | DvMF_2778 | | PAS/PAC sensor signal transduction histidine kinase (RefSeq) | insig. | 31 | 19 |
| Dyella japonica UNC79MFTsu3.2 | ABZR86_RS15525 | | GGDEF and EAL domain-containing protein | insig. | 30 | 26 |
| Mucilaginibacter yixingensis YX-36 DSM 26809 | ABZR88_RS11515 | | PAS domain S-box protein | cofit | 29 | 22 |
| Pseudomonas syringae pv. syringae B728a | Psyr_2940 | | PAS | insig. | 22 | 59 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | Psyr_2940 | | PAS | insig. | 22 | 59 |
| Escherichia coli Nissle 1917 | ECOLIN_RS12165 | | diguanylate cyclase | cofit | 32 | 22 |
| Enterobacter asburiae PDN3 | EX28DRAFT_0487 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain | insig. | 31 | 19 |
| Lysobacter sp. OAE881 | ABIE51_RS11685 | | CHASE domain-containing protein | strong | 23 | 52 |
| Pseudomonas fluorescens FW300-N2E2 | Pf6N2E2_1773 | | Sensory box histidine kinase | insig. | 36 | 17 |
| Dechlorosoma suillum PS | Dsui_0749 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | cofit | 31 | 20 |
| Dechlorosoma suillum PS | Dsui_1011 | | PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein | insig. | 24 | 28 |