Homologs of appB from Desulfovibrio vulgaris Hildenborough JW710

appB: oligopeptide ABC transporter, permease protein (TIGR)
SEED: Dipeptide transport system permease protein DppB (TC 3.A.1.5.2)
KEGG: peptide/nickel transport system permease protein

Top 100 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Desulfovibrio vulgaris Hildenborough JW710 DVU2461 appB oligopeptide ABC transporter, permease protein (TIGR) sig. 100 100
o Desulfovibrio vulgaris Miyazaki F DvMF_0920 binding-protein-dependent transport systems inner membrane component (RefSeq) strong 84 96
o Azospirillum brasilense Sp245 AZOBR_RS23020 ABC transporter permease insig. 41 93
o Rhodopseudomonas palustris CGA009 TX73_012040 ABC transporter permease cofit 40 96
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05803 dipeptide transport system permease protein sig. 39 95
o Paraburkholderia sabiae LMG 24235 QEN71_RS28700 ABC transporter permease subunit cofit 38 95
o Herbaspirillum seropedicae SmR1 HSERO_RS15950 ABC transporter permease insig. 40 94
o Burkholderia phytofirmans PsJN BPHYT_RS18685 peptide ABC transporter permease insig. 38 95
o Pseudomonas sp. RS175 PFR28_00127 Dipeptide transport system permease protein DppB insig. 39 94
o Pseudomonas fluorescens FW300-N2C3 AO356_07260 peptide ABC transporter permease strong 39 94
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_3311 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) strong 39 94
o Pseudomonas syringae pv. syringae B728a Psyr_4239 Binding-protein-dependent transport systems inner membrane component insig. 39 94
o Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_4239 Binding-protein-dependent transport systems inner membrane component insig. 39 94
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_1124 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) insig. 38 94
o Azospirillum sp. SherDot2 MPMX19_02826 Dipeptide transport system permease protein DppB insig. 38 95
o Serratia liquefaciens MT49 IAI46_15395 ABC transporter permease insig. 42 94
o Pseudomonas fluorescens GW456-L13 PfGW456L13_5055 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) strong 38 94
  Azospirillum sp. SherDot2 MPMX19_04006 Glutathione transport system permease protein GsiC insig. 40 95
o Klebsiella michiganensis M5al BWI76_RS16685 peptide ABC transporter permease insig. 43 89
  Acidovorax sp. GW101-3H11 Ac3H11_2910 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) strong 37 94
o Pseudomonas sp. S08-1 OH686_08705 Dipeptide ABC transporter, permease protein DppB cofit 40 94
o Rhizobium sp. OAE497 ABIE40_RS26090 ABC transporter permease insig. 39 94
o Pseudomonas fluorescens FW300-N2E3 AO353_05395 peptide ABC transporter permease strong 38 94
o Pseudomonas putida KT2440 PP_0881 dipeptide ABC transporter - putative membrane subunit strong 39 94
  Rhizobium sp. OAE497 ABIE40_RS03350 ABC transporter permease subunit insig. 39 95
  Variovorax sp. OAS795 ABID97_RS16515 ABC transporter permease subunit strong 37 95
o Pseudomonas fluorescens SBW25 PFLU_RS04100 ABC transporter permease subunit insig. 38 94
o Pseudomonas fluorescens SBW25-INTG PFLU_RS04100 ABC transporter permease subunit sig. 38 94
o Pseudomonas simiae WCS417 PS417_04060 dipeptide ABC transporter, permease component (from data) strong 38 94
  Variovorax sp. OAS795 ABID97_RS25730 ABC transporter permease insig. 39 90
o Variovorax sp. SCN45 GFF7018 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) insig. 40 88
o Rhodospirillum rubrum S1H Rru_A2013 Binding-protein-dependent transport systems inner membrane component (NCBI) insig. 40 94
o Rahnella sp. WP5 EX31_RS00060 ABC transporter permease insig. 39 94
o Agrobacterium fabrum C58 Atu4114 dipeptide ABC transporter permease sig. 38 96
o Bosea sp. OAE506 ABIE41_RS02625 ABC transporter permease cofit 38 94
o Dickeya dianthicola ME23 DZA65_RS09315 ABC transporter permease insig. 37 94
o Dickeya dadantii 3937 DDA3937_RS08940 ABC transporter permease insig. 37 93
o Dickeya dianthicola 67-19 HGI48_RS09010 ABC transporter permease insig. 36 94
  Rhodopseudomonas palustris CGA009 TX73_006245 ABC transporter permease cofit 41 95
o Enterobacter asburiae PDN3 EX28DRAFT_3026 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cofit 38 90
  Variovorax sp. SCN45 GFF7407 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) no data 39 95
  Rhodospirillum rubrum S1H Rru_A2357 Binding-protein-dependent transport systems inner membrane component (NCBI) cofit 37 94
o Fusobacterium nucleatum SB010 HUW76_03520 ABC transporter permease strong 37 95
  Variovorax sp. SCN45 GFF7284 Dipeptide ABC transporter, permease protein DppB (TC 3.A.1.5.2) insig. 38 95
  Pseudomonas syringae pv. syringae B728a Psyr_2266 Binding-protein-dependent transport systems inner membrane component insig. 39 94
  Pseudomonas syringae pv. syringae B728a ΔmexB Psyr_2266 Binding-protein-dependent transport systems inner membrane component insig. 39 94
o Ralstonia solanacearum PSI07 RPSI07_RS03250 ABC transporter permease insig. 40 94
  Bosea sp. OAE506 ABIE41_RS10345 ABC transporter permease insig. 39 94
  Rahnella sp. WP5 EX31_RS05510 dipeptide ABC transporter permease DppB insig. 36 94
  Sinorhizobium meliloti 1021 SMc00787 peptide ABC transporter permease cofit 38 95
  Agrobacterium fabrum C58 Atu3268 dipeptide ABC transporter permease sig. 38 92
  Acidovorax sp. GW101-3H11 Ac3H11_697 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) insig. 39 94
  Variovorax sp. OAS795 ABID97_RS04450 ABC transporter permease subunit insig. 38 95
  Rhodopseudomonas palustris CGA009 TX73_000520 ABC transporter permease insig. 41 88
  Variovorax sp. SCN45 GFF228 ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) cofit 37 94
  Pectobacterium carotovorum WPP14 HER17_RS00225 dipeptide ABC transporter permease DppB cofit 35 94
o Cupriavidus basilensis FW507-4G11 RR42_RS35235 glutathione ABC transporter permease insig. 40 90
  Paraburkholderia graminis OAS925 ABIE53_006374 microcin C transport system permease protein insig. 36 96
  Azospirillum brasilense Sp245 AZOBR_RS23920 peptide ABC transporter permease insig. 37 94
  Azospirillum brasilense Sp245 AZOBR_RS21765 peptide ABC transporter permease strong 36 95
o Escherichia coli BL21 ECD_03394 dipeptide/heme ABC transporter permease insig. 36 94
o Escherichia fergusonii Becca EFB2_00264 Dipeptide transport system permease protein DppB insig. 36 94
o Escherichia coli ECOR27 NOLOHH_08050 dppB dipeptide ABC transporter permease DppB cofit 36 94
o Escherichia coli ECOR38 HEPCGN_14970 dppB dipeptide ABC transporter permease DppB cofit 36 94
o Escherichia coli ECRC101 OKFHMN_16105 dppB dipeptide ABC transporter permease DppB insig. 36 94
o Escherichia coli ECRC101 MCAODC_06620 dppB dipeptide ABC transporter permease DppB insig. 36 94
o Escherichia coli ECRC102 NIAGMN_13865 dppB dipeptide ABC transporter permease DppB insig. 36 94
o Escherichia coli ECRC62 BNILDI_03510 dppB dipeptide ABC transporter permease DppB insig. 36 94
o Escherichia coli ECRC98 JDDGAC_19735 dppB dipeptide ABC transporter permease DppB no data 36 94
o Escherichia coli ECRC99 KEDOAH_12045 dppB dipeptide ABC transporter permease DppB no data 36 94
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00163 Dipeptide transport system permease protein DppB cofit 36 94
o Escherichia coli Nissle 1917 ECOLIN_RS20270 dipeptide ABC transporter permease DppB insig. 36 94
o Escherichia coli BW25113 b3543 dppB dipeptide ABC transporter, membrane subunit (DppB) (from data) sig. 36 94
  Klebsiella michiganensis M5al BWI76_RS26880 dipeptide ABC transporter permease DppB sig. 36 94
  Bosea sp. OAE506 ABIE41_RS10390 ABC transporter permease strong 37 94
  Hydrogenophaga sp. GW460-11-11-14-LB1 GFF4336 Oligopeptide transport system permease protein OppB (TC 3.A.1.5.1) cofit 37 98
o Phaeobacter inhibens DSM 17395 PGA1_c10110 glutathione transport system permease protein GsiC sig. 34 94
  Paraburkholderia graminis OAS925 ABIE53_006407 peptide/nickel transport system permease protein insig. 39 96
  Bosea sp. OAE506 ABIE41_RS12160 ABC transporter permease insig. 38 95
  Pantoea sp. MT58 IAI47_18645 dipeptide ABC transporter permease DppB insig. 36 94
  Cupriavidus basilensis FW507-4G11 RR42_RS27425 ABC transporter permease insig. 36 94
  Azospirillum sp. SherDot2 MPMX19_04418 Dipeptide transport system permease protein DppB cofit 37 95
  Enterobacter asburiae PDN3 EX28DRAFT_3803 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components cofit 35 94
  Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF476 Dipeptide transport system permease protein DppB (TC 3.A.1.5.2) insig. 35 94
  Burkholderia phytofirmans PsJN BPHYT_RS07160 ABC transporter permease insig. 35 96
  Azospirillum sp. SherDot2 MPMX19_04021 Dipeptide transport system permease protein DppB insig. 36 94
  Dickeya dianthicola 67-19 HGI48_RS20920 dipeptide ABC transporter permease DppB insig. 35 94
  Dickeya dianthicola ME23 DZA65_RS21915 dipeptide ABC transporter permease DppB insig. 35 94
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_04901 microcin C transport system permease protein insig. 35 96
  Bosea sp. OAE506 ABIE41_RS23965 microcin C ABC transporter permease YejB strong 35 93
  Rahnella sp. WP5 EX31_RS17545 ABC transporter permease insig. 38 94
  Enterobacter sp. TBS_079 MPMX20_00191 Dipeptide transport system permease protein DppB sig. 35 94
  Serratia liquefaciens MT49 IAI46_00480 dipeptide ABC transporter permease DppB insig. 35 94
  Bosea sp. OAE506 ABIE41_RS16370 ABC transporter permease insig. 39 91
  Rahnella sp. WP5 EX31_RS10145 ABC transporter permease insig. 38 93
  Klebsiella michiganensis M5al BWI76_RS26505 nickel ABC transporter permease subunit NikB insig. 38 96
  Agrobacterium fabrum C58 Atu6076 ABC transporter, membrane spanning protein (peptide) insig. 35 98
  Dickeya dadantii 3937 DDA3937_RS00465 dipeptide ABC transporter permease DppB sig. 35 94
  Rhodospirillum rubrum S1H Rru_A0980 Binding-protein-dependent transport systems inner membrane component (NCBI) insig. 38 95
  Rhodopseudomonas palustris CGA009 TX73_013695 ABC transporter permease insig. 41 87