Homologs of SO1402 from Shewanella oneidensis MR-1

conserved hypothetical protein (NCBI ptt file)
SEED: YheO-like PAS domain

71 hits from BLASTp (E < 0.01)

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Orth Species Gene Name Description Fitness %Id Cov
  Shewanella oneidensis MR-1 SO1402 conserved hypothetical protein (NCBI ptt file) sig. 100 100
o Shewanella sp. ANA-3 Shewana3_2973 YheO domain-containing protein (RefSeq) strong 98 100
o Dickeya dadantii 3937 DDA3937_RS19340 transcriptional regulator insig. 43 93
o Dickeya dianthicola 67-19 HGI48_RS19440 transcriptional regulator cofit 43 93
o Dickeya dianthicola ME23 DZA65_RS20560 transcriptional regulator insig. 43 93
o Vibrio cholerae E7946 ATCC 55056 CSW01_01875 hypothetical protein cofit 41 96
o Pantoea sp. MT58 IAI47_02055 transcriptional regulator insig. 42 93
o Klebsiella michiganensis M5al BWI76_RS25905 hypothetical protein strong 42 93
o Rahnella sp. WP5 EX31_RS04470 transcriptional regulator insig. 41 93
o Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 GFF3726 YheO-like PAS domain cofit 40 96
o Pectobacterium carotovorum WPP14 HER17_RS02010 transcriptional regulator insig. 40 93
o Escherichia coli ECOR38 HEPCGN_16130 yheO Uncharacterized protein YheO cofit 40 96
o Serratia liquefaciens MT49 IAI46_23490 transcriptional regulator insig. 41 93
o Escherichia coli BL21 ECD_03197 putative PAS domain-containing DNA-binding transcriptional regulator insig. 39 96
o Escherichia fergusonii Becca EFB2_00477 Transcriptional regulator DauR sig. 39 96
o Escherichia coli ECOR27 NOLOHH_09100 yheO Uncharacterized protein YheO cofit 39 96
o Escherichia coli ECRC101 OKFHMN_17300 yheO Uncharacterized protein YheO no data 39 96
o Escherichia coli ECRC101 MCAODC_07830 yheO Uncharacterized protein YheO insig. 39 96
o Escherichia coli ECRC102 NIAGMN_15070 yheO Uncharacterized protein YheO no data 39 96
o Escherichia coli ECRC62 BNILDI_02420 yheO Uncharacterized protein YheO insig. 39 96
o Escherichia coli ECRC98 JDDGAC_20930 yheO Uncharacterized protein YheO no data 39 96
o Escherichia coli ECRC99 KEDOAH_10840 yheO Uncharacterized protein YheO no data 39 96
o Escherichia coli HS(pFamp)R (ATCC 700891) OHPLBJKB_00357 Transcriptional regulator DauR insig. 39 96
o Escherichia coli Nissle 1917 ECOLIN_RS19165 transcriptional regulator cofit 39 96
o Escherichia coli BW25113 b3346 yheO orf, hypothetical protein (VIMSS) sig. 39 96
o Enterobacter asburiae PDN3 EX28DRAFT_4184 Uncharacterized protein conserved in bacteria insig. 40 96
o Enterobacter sp. TBS_079 MPMX20_04239 Transcriptional regulator DauR strong 40 96
o Erwinia tracheiphila SCR3 LU632_RS22710 transcriptional regulator strong 38 95
o Desulfovibrio vulgaris Hildenborough JW710 DVU2206 conserved hypothetical protein (TIGR) strong 32 87
  Pectobacterium carotovorum WPP14 HER17_RS09825 helix-turn-helix transcriptional regulator cofit 28 89
o Pseudomonas putida KT2440 PP_2931 conserved protein of unknown function insig. 28 94
  Dickeya dadantii 3937 DDA3937_RS08080 PAS domain-containing protein insig. 25 90
  Serratia liquefaciens MT49 IAI46_10330 PAS domain-containing protein insig. 26 93
o Paraburkholderia sabiae LMG 24235 QEN71_RS14280 helix-turn-helix transcriptional regulator insig. 24 92
o Pseudomonas fluorescens SBW25 PFLU_RS13585 DNA-binding protein insig. 25 90
o Pseudomonas fluorescens SBW25-INTG PFLU_RS13585 DNA-binding protein insig. 25 90
o Fusobacterium nucleatum SB010 HUW76_09955 PAS domain-containing protein cofit 27 90
o Pseudomonas sp. S08-1 OH686_07030 YheO-like PAS domain insig. 27 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS18565 PAS domain-containing protein insig. 25 87
o Cupriavidus basilensis FW507-4G11 RR42_RS11120 DNA-binding protein sig. 24 92
o Sinorhizobium meliloti 1021 SMa0496 hypothetical protein sig. 28 93
o Acidovorax sp. GW101-3H11 Ac3H11_38 YheO-like PAS domain insig. 26 87
o Pseudomonas fluorescens FW300-N2E2 Pf6N2E2_5396 YheO-like PAS domain sig. 26 90
  Paraburkholderia sabiae LMG 24235 QEN71_RS12460 PAS domain-containing protein sig. 26 87
o Pseudomonas fluorescens FW300-N2E3 AO353_04640 hypothetical protein insig. 27 89
o Pseudomonas fluorescens GW456-L13 PfGW456L13_1693 YheO-like PAS domain insig. 26 90
o Pseudomonas simiae WCS417 PS417_12915 DNA-binding protein insig. 23 93
o Herbaspirillum seropedicae SmR1 HSERO_RS01425 DNA-binding protein insig. 24 87
o Rhizobium sp. OAE497 ABIE40_RS21180 PAS domain-containing protein insig. 25 92
o Pseudomonas fluorescens FW300-N2C3 AO356_17355 hypothetical protein sig. 25 90
o Pseudomonas fluorescens FW300-N1B4 Pf1N1B4_923 YheO-like PAS domain insig. 25 90
o Burkholderia phytofirmans PsJN BPHYT_RS28105 hypothetical protein no data 26 90
o Ralstonia solanacearum GMI1000 RS_RS24435 DNA-binding protein insig. 24 92
o Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_01214 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 25 90
o Paraburkholderia graminis OAS925 ABIE53_005722 putative transcriptional regulator YheO strong 25 90
  Serratia liquefaciens MT49 IAI46_12675 PAS domain-containing protein insig. 27 94
o Variovorax sp. SCN45 GFF2493 YheO-like PAS domain insig. 22 89
  Paraburkholderia bryophila 376MFSha3.1 H281DRAFT_05884 Predicted transcriptional regulator YheO, contains PAS and DNA-binding HTH domains sig. 23 97
o Ralstonia solanacearum IBSBF1503 RALBFv3_RS16625 DNA-binding protein insig. 23 92
o Ralstonia solanacearum UW163 UW163_RS17980 DNA-binding protein insig. 23 92
  Pseudomonas simiae WCS417 PS417_10905 hypothetical protein insig. 25 90
o Pseudomonas sp. RS175 PFR28_03547 Transcriptional regulator DauR sig. 25 90
  Sinorhizobium meliloti 1021 SMc04327 hypothetical protein insig. 28 83
  Pseudomonas putida KT2440 PP_3192 conserved protein of unknown function sig. 26 90
  Paraburkholderia graminis OAS925 ABIE53_005529 putative transcriptional regulator YheO strong 23 92
  Pseudomonas fluorescens SBW25 PFLU_RS27750 hypothetical protein insig. 28 85
  Pseudomonas fluorescens SBW25-INTG PFLU_RS27750 hypothetical protein insig. 28 85
o Ralstonia sp. UNC404CL21Col ABZR87_RS17665 PAS domain-containing protein insig. 24 89
  Burkholderia phytofirmans PsJN BPHYT_RS10285 hypothetical protein strong 23 92
  Pseudomonas simiae WCS417 PS417_26120 hypothetical protein insig. 27 85
o Ralstonia solanacearum PSI07 RPSI07_RS06825 DNA-binding protein insig. 24 88