Conservation of cofitness between Xcc-8004.4065.1 and Xcc-8004.3976.1 in Xanthomonas campestris pv. campestris strain 8004

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Xanthomonas campestris pv. campestris strain 8004 1.0 Xcc-8004.4065.1 Exopolyphosphatase (EC 3.6.1.11) 1.0 Xcc-8004.3976.1 2-methylaconitate cis-trans isomerase 0.53 8
Lysobacter sp. OAE881 0.73 ABIE51_RS14235 exopolyphosphatase 0.81 ABIE51_RS09485 2-methylaconitate cis-trans isomerase PrpF — —
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS00705 Ppx/GppA phosphatase family protein 0.79 ABZR86_RS08430 2-methylaconitate cis-trans isomerase PrpF low > 74
Pseudomonas putida KT2440 0.41 PP_5216 exopolyphosphatase 0.81 PP_2337 aconitate isomerase low > 96
Pseudomonas fluorescens GW456-L13 0.40 PfGW456L13_875 Exopolyphosphatase (EC 3.6.1.11) 0.78 PfGW456L13_4115 2-methylaconitate cis-trans isomerase low > 87
Pseudomonas fluorescens FW300-N1B4 0.40 Pf1N1B4_2209 Exopolyphosphatase (EC 3.6.1.11) 0.78 Pf1N1B4_3822 2-methylaconitate cis-trans isomerase — —
Pseudomonas stutzeri RCH2 0.40 Psest_3731 exopolyphosphatase 0.77 Psest_2318 probable AcnD-accessory protein PrpF — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.40 Psyr_0294 Exopolyphosphatase 0.77 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas syringae pv. syringae B728a 0.40 Psyr_0294 Exopolyphosphatase 0.77 Psyr_2088 2-methylaconitate cis-trans isomerase low > 86
Pseudomonas fluorescens SBW25 0.40 PFLU_RS29090 exopolyphosphatase 0.77 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas sp. S08-1 0.40 OH686_11275 Exopolyphosphatase 0.78 OH686_01675 probable AcnD-accessory protein PrpF — —
Pseudomonas fluorescens SBW25-INTG 0.40 PFLU_RS29090 exopolyphosphatase 0.77 PFLU_RS22675 2-methylaconitate cis-trans isomerase PrpF low > 109
Pseudomonas sp. RS175 0.40 PFR28_04344 Exopolyphosphatase 0.78 PFR28_02924 2-methyl-aconitate isomerase low > 88
Pseudomonas simiae WCS417 0.40 PS417_27425 exopolyphosphatase 0.78 PS417_21065 3-methylitaconate isomerase low > 88
Pseudomonas fluorescens FW300-N2C3 0.40 AO356_12900 exopolyphosphatase 0.78 AO356_20880 3-methylitaconate isomerase low > 104
Pseudomonas fluorescens FW300-N2E3 0.40 AO353_08880 exopolyphosphatase 0.79 AO353_00885 3-methylitaconate isomerase low > 101
Pseudomonas fluorescens FW300-N2E2 0.39 Pf6N2E2_4454 Exopolyphosphatase (EC 3.6.1.11) 0.79 Pf6N2E2_6064 2-methylaconitate isomerase low > 103
Marinobacter adhaerens HP15 0.36 HP15_228 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 0.72 HP15_1929 AcnD-accessory protein PrpF — —
Acinetobacter radioresistens SK82 0.33 MPMX26_00569 Exopolyphosphatase 0.73 MPMX26_00659 2-methyl-aconitate isomerase low > 36
Alteromonas macleodii MIT1002 0.33 MIT1002_00871 Exopolyphosphatase 0.72 MIT1002_03132 3-methylitaconate isomerase — —
Vibrio cholerae E7946 ATCC 55056 0.32 CSW01_03775 exopolyphosphatase 0.71 CSW01_06750 2-methylaconitate cis-trans isomerase PrpF low > 62
Paraburkholderia bryophila 376MFSha3.1 0.32 H281DRAFT_04419 Ppx/GppA phosphatase 0.78 H281DRAFT_02982 2-methylaconitate cis-trans isomerase low > 103
Burkholderia phytofirmans PsJN 0.32 BPHYT_RS14105 exopolyphosphatase 0.78 BPHYT_RS30140 3-methylitaconate isomerase low > 109
Cupriavidus basilensis FW507-4G11 0.32 RR42_RS13430 exopolyphosphatase 0.80 RR42_RS11275 3-methylitaconate isomerase low > 128
Paraburkholderia sabiae LMG 24235 0.32 QEN71_RS04855 exopolyphosphatase 0.78 QEN71_RS31055 2-methylaconitate cis-trans isomerase PrpF low > 153
Kangiella aquimarina DSM 16071 0.31 B158DRAFT_2313 Exopolyphosphatase 0.74 B158DRAFT_1346 2-methylaconitate cis-trans isomerase low > 40
Ralstonia sp. UNC404CL21Col 0.31 ABZR87_RS14060 exopolyphosphatase 0.81 ABZR87_RS16730 2-methylaconitate cis-trans isomerase PrpF low > 80
Ralstonia solanacearum UW163 0.31 UW163_RS15420 exopolyphosphatase 0.79 UW163_RS23455 2-methylaconitate cis-trans isomerase PrpF — —
Ralstonia solanacearum PSI07 0.31 RPSI07_RS15335 exopolyphosphatase 0.80 RPSI07_RS00385 2-methylaconitate cis-trans isomerase PrpF low > 81
Ralstonia solanacearum IBSBF1503 0.31 RALBFv3_RS02110 exopolyphosphatase 0.79 RALBFv3_RS22835 2-methylaconitate cis-trans isomerase PrpF low > 76
Acidovorax sp. GW101-3H11 0.30 Ac3H11_455 Exopolyphosphatase (EC 3.6.1.11) 0.75 Ac3H11_2325 2-methylaconitate cis-trans isomerase — —
Ralstonia solanacearum GMI1000 0.30 RS_RS07710 exopolyphosphatase 0.80 RS_RS17725 2-methylaconitate cis-trans isomerase PrpF low > 80
Variovorax sp. SCN45 0.28 GFF1091 Exopolyphosphatase (EC 3.6.1.11) 0.77 GFF269 2-methylaconitate isomerase low > 127
Variovorax sp. OAS795 0.28 ABID97_RS14590 Ppx/GppA phosphatase family protein 0.59 ABID97_RS19020 2-methylaconitate cis-trans isomerase PrpF low > 91
Shewanella oneidensis MR-1 0.27 SO2185 ppx exopolyphosphatase (NCBI ptt file) 0.76 SO0342 conserved hypothetical protein (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.27 Sama_2012 guanosine-5'-triphosphate,3'-diphosphate diphosphatase (RefSeq) 0.73 Sama_3297 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.26 Shewana3_2418 Ppx/GppA phosphatase (RefSeq) 0.76 Shewana3_3828 methylitaconate delta2-delta3-isomerase (RefSeq) low > 73
Shewanella loihica PV-4 0.25 Shew_3078 Ppx/GppA phosphatase (RefSeq) 0.73 Shew_1823 putative AcnD-accessory protein PrpF (RefSeq) low > 60
Herbaspirillum seropedicae SmR1 0.23 HSERO_RS09440 exopolyphosphatase 0.77 HSERO_RS11420 3-methylitaconate isomerase — —

Not shown: 34 genomes with orthologs for Xcc-8004.4065.1 only; 2 genomes with orthologs for Xcc-8004.3976.1 only