| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Rhodopseudomonas palustris CGA009 | 1.0 | TX73_009115 | | phosphoenolpyruvate carboxylase | 1.0 | TX73_015515 | | LysR family transcriptional regulator | 0.56 | 9 |
| Dechlorosoma suillum PS | 0.53 | Dsui_1603 | | phosphoenolpyruvate carboxylase | 0.25 | Dsui_1151 | | transcriptional regulator | — | — |
| Herbaspirillum seropedicae SmR1 | 0.47 | HSERO_RS14670 | | phosphoenolpyruvate carboxylase | 0.37 | HSERO_RS11605 | | LysR family transcriptional regulator | low | > 78 |
| Paraburkholderia graminis OAS925 | 0.46 | ABIE53_001314 | | phosphoenolpyruvate carboxylase | 0.24 | ABIE53_004867 | | LysR family transcriptional activator of nhaA | low | > 113 |
| Acidovorax sp. GW101-3H11 | 0.46 | Ac3H11_3553 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.26 | Ac3H11_815 | | Transcriptional regulator, LysR family | low | > 79 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.46 | H281DRAFT_00197 | | Phosphoenolpyruvate carboxylase, type 1 | 0.24 | H281DRAFT_01823 | | transcriptional regulator, LysR family | low | > 103 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.45 | GFF115 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.21 | GFF1910 | | Cys regulon transcriptional activator CysB | low | > 90 |
| Burkholderia phytofirmans PsJN | 0.45 | BPHYT_RS05225 | | phosphoenolpyruvate carboxylase | 0.26 | BPHYT_RS10255 | | LysR family transcriptional regulator | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.45 | QEN71_RS24955 | | phosphoenolpyruvate carboxylase | 0.24 | QEN71_RS11585 | | transcriptional activator NhaR | low | > 153 |
| Shewanella amazonensis SB2B | 0.25 | Sama_0254 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.19 | Sama_0870 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 62 |
| Pantoea sp. MT58 | 0.25 | IAI47_00895 | | phosphoenolpyruvate carboxylase | 0.19 | IAI47_16160 | | transcriptional activator NhaR | low | > 76 |
| Pseudomonas putida KT2440 | 0.24 | PP_1505 | | Phosphoenolpyruvate carboxylase | 0.23 | PP_2444 | | Transcriptional regulator, LysR family | low | > 96 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.24 | GFF2342 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.18 | GFF1120 | | Transcriptional activator NhaR | low | > 78 |
| Escherichia fergusonii Becca | 0.24 | EFB2_04658 | | Phosphoenolpyruvate carboxylase | 0.18 | EFB2_04023 | | Transcriptional activator protein NhaR | low | > 86 |
| Escherichia coli ECOR38 | 0.24 | HEPCGN_12240 | ppc | phosphoenolpyruvate carboxylase | 0.18 | HEPCGN_09010 | nhaR | transcriptional activator NhaR | low | > 87 |
| Escherichia coli BW25113 | 0.24 | b3956 | ppc | phosphoenolpyruvate carboxylase (NCBI) | 0.18 | b0020 | nhaR | DNA-binding transcriptional activator (NCBI) | low | > 76 |
| Escherichia coli ECRC62 | 0.24 | BNILDI_05785 | ppc | phosphoenolpyruvate carboxylase | 0.18 | BNILDI_08250 | nhaR | transcriptional activator NhaR | low | > 75 |
| Escherichia coli BL21 | 0.24 | ECD_03841 | | phosphoenolpyruvate carboxylase | 0.18 | ECD_00019 | | transcriptional activator of nhaA | low | > 61 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.24 | OHPLBJKB_04094 | | Phosphoenolpyruvate carboxylase | 0.18 | OHPLBJKB_03641 | | Transcriptional activator protein NhaR | low | > 73 |
| Escherichia coli Nissle 1917 | 0.24 | ECOLIN_RS22835 | | phosphoenolpyruvate carboxylase | 0.18 | ECOLIN_RS00110 | | transcriptional activator NhaR | low | > 55 |
| Escherichia coli ECOR27 | 0.24 | NOLOHH_05740 | ppc | phosphoenolpyruvate carboxylase | 0.18 | NOLOHH_03355 | nhaR | transcriptional activator NhaR | low | > 75 |
| Shewanella sp. ANA-3 | 0.24 | Shewana3_3906 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.17 | Shewana3_3036 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 73 |
| Escherichia coli ECRC101 | 0.24 | MCAODC_04095 | ppc | phosphoenolpyruvate carboxylase | 0.18 | MCAODC_01540 | nhaR | transcriptional activator NhaR | low | > 87 |
| Shewanella oneidensis MR-1 | 0.24 | SO0274 | ppc | phosphoenolpyruvate carboxylase (NCBI ptt file) | 0.17 | SO1338 | nhaR | transcriptional activator protein NhaR (NCBI ptt file) | low | > 76 |
| Escherichia coli ECRC102 | 0.24 | NIAGMN_11345 | ppc | phosphoenolpyruvate carboxylase | 0.18 | NIAGMN_08875 | nhaR | transcriptional activator NhaR | — | — |
| Escherichia coli ECRC98 | 0.24 | JDDGAC_17220 | ppc | phosphoenolpyruvate carboxylase | 0.18 | JDDGAC_14620 | nhaR | transcriptional activator NhaR | low | > 86 |
| Escherichia coli ECRC100 | 0.24 | OKFHMN_13595 | ppc | phosphoenolpyruvate carboxylase | 0.18 | OKFHMN_11025 | nhaR | transcriptional activator NhaR | low | > 80 |
| Pseudomonas sp. RS175 | 0.24 | PFR28_00368 | | Phosphoenolpyruvate carboxylase | 0.21 | PFR28_01216 | | Transcriptional activator protein NhaR | low | > 88 |
| Escherichia coli ECRC99 | 0.24 | KEDOAH_14565 | ppc | phosphoenolpyruvate carboxylase | 0.18 | KEDOAH_17130 | nhaR | transcriptional activator NhaR | — | — |
| Enterobacter asburiae PDN3 | 0.24 | EX28DRAFT_4418 | | Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) | 0.17 | EX28DRAFT_3629 | | Transcriptional regulator | low | > 76 |
| Enterobacter sp. TBS_079 | 0.24 | MPMX20_04524 | | Phosphoenolpyruvate carboxylase | 0.18 | MPMX20_00723 | | Transcriptional activator protein NhaR | low | > 85 |
| Pectobacterium carotovorum WPP14 | 0.24 | HER17_RS20655 | | phosphoenolpyruvate carboxylase | 0.17 | HER17_RS02855 | | transcriptional activator NhaR | low | > 75 |
| Rahnella sp. WP5 | 0.24 | EX31_RS14200 | | phosphoenolpyruvate carboxylase | 0.19 | EX31_RS03885 | | transcriptional activator NhaR | low | > 89 |
| Serratia liquefaciens MT49 | 0.24 | IAI46_24525 | | phosphoenolpyruvate carboxylase | 0.18 | IAI46_03090 | | transcriptional activator NhaR | low | > 86 |
| Pseudomonas fluorescens FW300-N2C3 | 0.24 | AO356_06185 | | phosphoenolpyruvate carboxylase | 0.21 | AO356_01805 | | LysR family transcriptional regulator | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.24 | Pf6N2E2_3103 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.21 | Pf6N2E2_2228 | | Transcriptional regulator, LysR family | low | > 103 |
| Pseudomonas fluorescens FW300-N1B4 | 0.24 | Pf1N1B4_3051 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.22 | Pf1N1B4_3936 | | Transcriptional regulator, LysR family | low | > 87 |
| Pseudomonas fluorescens SBW25 | 0.24 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | 0.24 | PFLU_RS10530 | | transcriptional activator NhaR | low | > 109 |
| Pseudomonas fluorescens SBW25-INTG | 0.24 | PFLU_RS06130 | | phosphoenolpyruvate carboxylase | 0.24 | PFLU_RS10530 | | transcriptional activator NhaR | low | > 109 |
| Klebsiella michiganensis M5al | 0.24 | BWI76_RS00835 | | phosphoenolpyruvate carboxylase | 0.18 | BWI76_RS04320 | | transcriptional activator NhaR | low | > 92 |
| Pseudomonas fluorescens GW456-L13 | 0.23 | PfGW456L13_4740 | | Phosphoenolpyruvate carboxylase (EC 4.1.1.31) | 0.22 | PfGW456L13_2543 | | Transcriptional regulator, LysR family | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.23 | AO353_16310 | | phosphoenolpyruvate carboxylase | 0.23 | AO353_20115 | | LysR family transcriptional regulator | low | > 101 |
| Vibrio cholerae E7946 ATCC 55056 | 0.23 | CSW01_13390 | | phosphoenolpyruvate carboxylase | 0.41 | CSW01_07930 | | LysR family transcriptional regulator | low | > 62 |
| Pseudomonas simiae WCS417 | 0.23 | PS417_06060 | | phosphoenolpyruvate carboxylase | 0.24 | PS417_10445 | | LysR family transcriptional regulator | low | > 88 |
| Shewanella loihica PV-4 | 0.23 | Shew_0200 | | phosphoenolpyruvate carboxylase (RefSeq) | 0.18 | Shew_1044 | nhaR | transcriptional activator NhaR (RefSeq) | low | > 60 |
| Dickeya dianthicola 67-19 | 0.23 | HGI48_RS00850 | | phosphoenolpyruvate carboxylase | 0.13 | HGI48_RS07865 | | LysR family transcriptional regulator | low | > 71 |
| Dickeya dadantii 3937 | 0.23 | DDA3937_RS20360 | | phosphoenolpyruvate carboxylase | 0.17 | DDA3937_RS18355 | | transcriptional activator NhaR | — | — |
| Marinobacter adhaerens HP15 | 0.23 | HP15_795 | | phosphoenolpyruvate carboxylase | 0.44 | HP15_1621 | | transcriptional regulator, LysR family protein | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.23 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | 0.23 | Psyr_2422 | | transcriptional regulator, LysR family | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.23 | Psyr_1318 | | Phosphoenolpyruvate carboxylase | 0.23 | Psyr_2422 | | transcriptional regulator, LysR family | low | > 86 |
| Dickeya dianthicola ME23 | 0.23 | DZA65_RS00895 | | phosphoenolpyruvate carboxylase | 0.13 | DZA65_RS08455 | | LysR family transcriptional regulator | low | > 75 |
| Alteromonas macleodii MIT1002 | 0.22 | MIT1002_03491 | | Phosphoenolpyruvate carboxylase | 0.19 | MIT1002_03553 | | Na(+)/H(+) antiporter regulatory protein | low | > 70 |
Not shown: 30 genomes with orthologs for TX73_009115 only; 5 genomes with orthologs for TX73_015515 only