Conservation of cofitness between TX73_019540 and TX73_013235 in Rhodopseudomonas palustris CGA009

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_019540 FAD-dependent oxidoreductase 1.0 TX73_013235 cystathionine beta-lyase 0.61 7
Rhizobium sp. OAE497 0.54 ABIE40_RS03380 FAD-binding oxidoreductase 0.53 ABIE40_RS08820 cystathionine beta-lyase low > 107
Sinorhizobium meliloti 1021 0.53 SMc00797 oxidoreductase 0.51 SMc02117 cystathionine beta-lyase low > 103
Ralstonia solanacearum PSI07 0.53 RPSI07_RS07505 FAD-binding oxidoreductase 0.38 RPSI07_RS02185 cystathionine beta-lyase low > 81
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_03160 D-amino-acid dehydrogenase 0.37 H281DRAFT_00859 cystathionine beta-lyase — —
Ralstonia solanacearum IBSBF1503 0.52 RALBFv3_RS16195 FAD-binding oxidoreductase 0.37 RALBFv3_RS20555 cystathionine beta-lyase low > 76
Ralstonia solanacearum UW163 0.52 UW163_RS16930 FAD-binding oxidoreductase 0.37 UW163_RS18620 cystathionine beta-lyase — —
Burkholderia phytofirmans PsJN 0.51 BPHYT_RS10270 D-amino acid dehydrogenase 0.37 BPHYT_RS09190 cystathionine beta-lyase low > 109
Bosea sp. OAE506 0.51 ABIE41_RS13575 FAD-binding oxidoreductase 0.35 ABIE41_RS01480 cystathionine beta-lyase low > 77
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS12475 FAD-binding oxidoreductase 0.37 QEN71_RS22165 cystathionine beta-lyase low > 153
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS23145 FAD-binding oxidoreductase 0.41 ABZR87_RS11250 cystathionine beta-lyase low > 80
Hydrogenophaga sp. GW460-11-11-14-LB1 0.41 GFF267 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.43 GFF5026 Cystathionine beta-lyase (EC 4.4.1.8) low > 90
Shewanella loihica PV-4 0.24 Shew_2360 D-hydroxyproline dehydrogenase (from data) 0.48 Shew_1789 cystathionine beta-lyase (RefSeq) low > 60
Ralstonia solanacearum GMI1000 0.23 RS_RS02525 FAD-dependent oxidoreductase 0.35 RS_RS08260 cystathionine beta-lyase low > 80
Shewanella amazonensis SB2B 0.23 Sama_1533 D-amino-acid dehydrogenase (RefSeq) 0.47 Sama_2008 cystathionine beta-lyase (RefSeq) low > 62
Castellaniella sp019104865 MT123 0.21 ABCV34_RS10190 FAD-dependent oxidoreductase 0.29 ABCV34_RS12385 PLP-dependent aspartate aminotransferase family protein low > 48
Agrobacterium fabrum C58 0.20 Atu3364 D-amino acid dehydrogenase 0.47 Atu1575 cystathionine beta lyase low > 89
Rhodospirillum rubrum S1H 0.19 Rru_A2064 FAD dependent oxidoreductase (NCBI) 0.47 Rru_A1613 Cystathionine beta-lyase (NCBI) low > 58
Herbaspirillum seropedicae SmR1 0.19 HSERO_RS22955 D-amino acid dehydrogenase 0.34 HSERO_RS14995 cystathionine beta-lyase low > 78
Azospirillum sp. SherDot2 0.18 MPMX19_04536 D-amino acid dehydrogenase 1 0.45 MPMX19_01339 Cystathionine beta-lyase MetC low > 112
Cupriavidus basilensis FW507-4G11 0.18 RR42_RS09075 amino acid dehydrogenase 0.36 RR42_RS07655 cystathionine beta-lyase low > 128
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_04065 D-amino acid dehydrogenase small subunit 0.46 CSW01_08400 cystathionine beta-lyase low > 62
Variovorax sp. OAS795 0.16 ABID97_RS22385 D-amino acid dehydrogenase 0.39 ABID97_RS22430 cystathionine beta-lyase low > 91
Brevundimonas sp. GW460-12-10-14-LB2 0.16 A4249_RS08770 D-amino acid dehydrogenase 0.35 A4249_RS05585 cystathionine beta-lyase low > 48
Pseudomonas fluorescens FW300-N2E3 0.16 AO353_09155 amino acid dehydrogenase 0.52 AO353_24330 cystathionine beta-lyase low > 101
Variovorax sp. SCN45 0.16 GFF1773 D-amino acid dehydrogenase (EC 1.4.99.6) 0.40 GFF1749 Cystathionine beta-lyase (EC 4.4.1.8) low > 127
Pectobacterium carotovorum WPP14 0.15 HER17_RS11170 D-amino acid dehydrogenase 0.39 HER17_RS19690 cystathionine beta-lyase low > 75
Pseudomonas syringae pv. syringae B728a 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.34 Psyr_0607 cystathionine beta-lyase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.15 Psyr_0235 D-amino acid dehydrogenase small subunit 0.34 Psyr_0607 cystathionine beta-lyase low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.14 GFF2804 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.42 GFF3120 Cystathionine beta-lyase (EC 4.4.1.8) low > 78
Rahnella sp. WP5 0.14 EX31_RS10485 D-amino acid dehydrogenase 0.40 EX31_RS08025 cystathionine beta-lyase low > 89
Azospirillum brasilense Sp245 0.14 AZOBR_RS08020 D-alanine dehydrogenase (EC 1.4.99.-) (from data) 0.49 AZOBR_RS08650 cystathionine beta-lyase low > 97
Dickeya dianthicola 67-19 0.14 HGI48_RS11195 D-amino acid dehydrogenase 0.39 HGI48_RS01710 cystathionine beta-lyase low > 71
Dickeya dadantii 3937 0.14 DDA3937_RS11170 D-amino acid dehydrogenase 0.40 DDA3937_RS01815 cystathionine beta-lyase low > 74
Klebsiella michiganensis M5al 0.14 BWI76_RS17735 D-amino acid dehydrogenase small subunit 0.40 BWI76_RS24285 cystathionine beta-lyase low > 92
Dickeya dianthicola ME23 0.14 DZA65_RS11540 D-amino acid dehydrogenase 0.39 DZA65_RS01785 cystathionine beta-lyase low > 75
Enterobacter asburiae PDN3 0.13 EX28DRAFT_0766 Glycine/D-amino acid oxidases (deaminating) 0.40 EX28DRAFT_3046 cystathionine beta-lyase, bacterial low > 76
Escherichia coli BW25113 0.13 b1189 dadA D-amino acid dehydrogenase (quinone) DadA (EC 1.4.5.1) (from data) 0.41 b3008 metC cystathionine beta-lyase (NCBI) low > 76
Escherichia coli ECRC98 0.13 JDDGAC_06220 dadA D-amino acid dehydrogenase 0.41 JDDGAC_22595 metC cystathionine beta-lyase — —
Escherichia coli ECRC100 0.13 OKFHMN_28290 dadA D-amino acid dehydrogenase 0.41 OKFHMN_18960 metC cystathionine beta-lyase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.13 OHPLBJKB_02500 D-amino acid dehydrogenase 0.41 OHPLBJKB_00693 Cystathionine beta-lyase MetC low > 73
Escherichia coli ECRC99 0.13 KEDOAH_25305 dadA D-amino acid dehydrogenase 0.41 KEDOAH_09185 metC cystathionine beta-lyase — —
Escherichia coli ECRC101 0.13 MCAODC_21880 dadA D-amino acid dehydrogenase 0.41 MCAODC_09475 metC cystathionine beta-lyase low > 87
Escherichia coli Nissle 1917 0.13 ECOLIN_RS07185 D-amino acid dehydrogenase 0.41 ECOLIN_RS17315 cystathionine beta-lyase — —
Escherichia coli ECOR38 0.13 HEPCGN_24750 dadA D-amino acid dehydrogenase 0.42 HEPCGN_17825 metC cystathionine beta-lyase low > 87
Escherichia coli ECOR27 0.13 NOLOHH_20725 dadA D-amino acid dehydrogenase 0.41 NOLOHH_10735 metC cystathionine beta-lyase low > 75
Escherichia coli ECRC62 0.13 BNILDI_18890 dadA D-amino acid dehydrogenase 0.41 BNILDI_00780 metC cystathionine beta-lyase low > 75
Escherichia coli BL21 0.13 ECD_01164 D-amino acid dehydrogenase 0.42 ECD_02881 cystathionine beta-lyase, PLP-dependent low > 61
Escherichia coli ECRC102 0.13 NIAGMN_27930 dadA D-amino acid dehydrogenase 0.41 NIAGMN_16725 metC cystathionine beta-lyase — —
Pantoea sp. MT58 0.13 IAI47_08890 D-amino acid dehydrogenase 0.37 IAI47_03215 cystathionine beta-lyase low > 76
Escherichia fergusonii Becca 0.13 EFB2_02743 D-amino acid dehydrogenase 0.41 EFB2_00802 Cystathionine beta-lyase MetC low > 86
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1644 D-amino acid dehydrogenase small subunit (EC 1.4.99.1) 0.27 Ac3H11_4146 Cystathionine beta-lyase (EC 4.4.1.8) low > 79
Magnetospirillum magneticum AMB-1 0.13 AMB_RS14080 D-amino-acid dehydrogenase 0.49 AMB_RS06585 cystathionine beta-lyase — —
Enterobacter sp. TBS_079 0.13 MPMX20_02699 D-amino acid dehydrogenase 0.39 MPMX20_03852 Cystathionine beta-lyase MetC low > 85
Erwinia tracheiphila SCR3 0.13 LU632_RS13070 D-amino acid dehydrogenase 0.37 LU632_RS20545 metC cystathionine beta-lyase low > 74
Acinetobacter radioresistens SK82 0.12 MPMX26_01248 D-amino acid dehydrogenase 0.22 MPMX26_02724 Cystathionine beta-lyase low > 36
Serratia liquefaciens MT49 0.12 IAI46_14460 D-amino acid dehydrogenase 0.38 IAI46_21725 cystathionine beta-lyase low > 86
Sphingomonas koreensis DSMZ 15582 0.11 Ga0059261_3351 Glycine/D-amino acid oxidases (deaminating) 0.45 Ga0059261_1388 cystathionine beta-lyase, bacterial low > 68

Not shown: 23 genomes with orthologs for TX73_019540 only; 4 genomes with orthologs for TX73_013235 only