Conservation of cofitness between TX73_000960 and TX73_012935 in Rhodopseudomonas palustris CGA009

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_000960 dihydrolipoyl dehydrogenase 1.0 TX73_012935 LL-diaminopimelate aminotransferase 0.45 19
Bosea sp. OAE506 0.72 ABIE41_RS08990 dihydrolipoyl dehydrogenase 0.82 ABIE41_RS19175 LL-diaminopimelate aminotransferase — —
Sinorhizobium meliloti 1021 0.69 SMc02487 dihydrolipoamide dehydrogenase 0.76 SMc00294 aminotransferase — —
Rhizobium sp. OAE497 0.68 ABIE40_RS17960 dihydrolipoyl dehydrogenase 0.76 ABIE40_RS08645 LL-diaminopimelate aminotransferase — —
Agrobacterium fabrum C58 0.68 Atu2632 dihydrolipoamide dehydrogenase 0.76 Atu1589 aminotransferase, class I — —
Caulobacter crescentus NA1000 Δfur 0.63 CCNA_00346 dihydrolipoamide dehydrogenase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase — —
Caulobacter crescentus NA1000 0.63 CCNA_00346 dihydrolipoamide dehydrogenase 0.66 CCNA_01446 LL-diaminopimelate aminotransferase — —
Azospirillum brasilense Sp245 0.62 AZOBR_RS03960 dihydrolipoamide dehydrogenase 0.62 AZOBR_RS07830 aminotransferase — —
Azospirillum sp. SherDot2 0.61 MPMX19_02113 Dihydrolipoyl dehydrogenase 3 0.63 MPMX19_00804 Glutamate-pyruvate aminotransferase AlaC — —
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_11880 dihydrolipoamide dehydrogenase 0.50 AO356_05050 glutamate-pyruvate aminotransferase low > 104
Rhodospirillum rubrum S1H 0.60 Rru_A1215 Dihydrolipoamide dehydrogenase (NCBI) 0.64 Rru_A2411 Aminotransferase, class I and II (NCBI) — —
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_1976 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.50 Pf1N1B4_555 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_4251 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.50 Pf6N2E2_2862 Uncharacterized PLP-dependent aminotransferase YfdZ low > 103
Pseudomonas sp. RS175 0.60 PFR28_04545 Dihydrolipoyl dehydrogenase 3 0.50 PFR28_00596 Glutamate-pyruvate aminotransferase AlaC low > 88
Pseudomonas fluorescens GW456-L13 0.59 PfGW456L13_698 Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.50 PfGW456L13_1928 Uncharacterized PLP-dependent aminotransferase YfdZ low > 87
Brevundimonas sp. GW460-12-10-14-LB2 0.59 A4249_RS12115 dihydrolipoyl dehydrogenase 0.62 A4249_RS02425 LL-diaminopimelate aminotransferase — —
Magnetospirillum magneticum AMB-1 0.59 AMB_RS20050 dihydrolipoyl dehydrogenase 0.62 AMB_RS18860 pyridoxal phosphate-dependent aminotransferase — —
Pseudomonas sp. S08-1 0.59 OH686_23900 dihydrolipoyl dehydrogenase 0.49 OH686_04000 Glutamate-pyruvate aminotransferase AlaC low > 80
Pseudomonas putida KT2440 0.58 PP_5366 dihydrolipoyl dehydrogenase 0.50 PP_0817 aminotransferase low > 96
Sphingomonas koreensis DSMZ 15582 0.56 Ga0059261_1343 dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.63 Ga0059261_1288 Aspartate/tyrosine/aromatic aminotransferase — —
Echinicola vietnamensis KMM 6221, DSM 17526 0.55 Echvi_0770 dihydrolipoamide dehydrogenase 0.24 Echvi_0124 Aspartate/tyrosine/aromatic aminotransferase — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.52 CA264_18500 dihydrolipoyl dehydrogenase 0.19 CA264_01550 aminotransferase — —
Dechlorosoma suillum PS 0.51 Dsui_2219 dihydrolipoamide dehydrogenase 0.49 Dsui_2909 aspartate/tyrosine/aromatic aminotransferase — —
Castellaniella sp019104865 MT123 0.50 ABCV34_RS01730 dihydrolipoyl dehydrogenase 0.52 ABCV34_RS02290 alanine transaminase — —
Cupriavidus basilensis FW507-4G11 0.49 RR42_RS12930 dihydrolipoamide dehydrogenase 0.49 RR42_RS28540 glutamate--pyruvate aminotransferase — —
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_2011 dihydrolipoamide dehydrogenase 0.49 Psyr_0468 Aminotransferase, class I and II — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_2011 dihydrolipoamide dehydrogenase 0.49 Psyr_0468 Aminotransferase, class I and II — —
Pseudomonas fluorescens FW300-N2E3 0.48 AO353_01825 dihydrolipoamide dehydrogenase 0.50 AO353_03235 glutamate-pyruvate aminotransferase — —
Herbaspirillum seropedicae SmR1 0.48 HSERO_RS14875 dihydrolipoamide dehydrogenase 0.51 HSERO_RS12800 aspartate aminotransferase — —
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS08965 dihydrolipoyl dehydrogenase 0.49 PFLU_RS23580 alanine transaminase — —
Pseudomonas fluorescens SBW25 0.47 PFLU_RS08965 dihydrolipoyl dehydrogenase 0.49 PFLU_RS23580 alanine transaminase — —
Pseudomonas simiae WCS417 0.47 PS417_08905 dihydrolipoamide dehydrogenase 0.50 PS417_21975 glutamate-pyruvate aminotransferase — —
Acidovorax sp. GW101-3H11 0.47 Ac3H11_2465 Dihydrolipoamide dehydrogenase of 2-oxoglutarate dehydrogenase (EC 1.8.1.4) 0.50 Ac3H11_3720 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Pectobacterium carotovorum WPP14 0.38 HER17_RS03300 dihydrolipoyl dehydrogenase 0.49 HER17_RS06655 alanine transaminase — —
Escherichia coli ECOR27 0.37 NOLOHH_02835 lpdA dihydrolipoyl dehydrogenase 0.49 NOLOHH_14055 alaC alanine transaminase — —
Dickeya dianthicola 67-19 0.37 HGI48_RS17840 dihydrolipoyl dehydrogenase 0.49 HGI48_RS14755 alanine transaminase — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.37 OHPLBJKB_03545 Dihydrolipoyl dehydrogenase 0.49 OHPLBJKB_01342 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli ECOR38 0.37 HEPCGN_08470 lpdA dihydrolipoyl dehydrogenase 0.49 HEPCGN_21580 alaC alanine transaminase — —
Escherichia coli ECRC98 0.37 JDDGAC_14085 lpdA dihydrolipoyl dehydrogenase 0.50 JDDGAC_26335 alaC alanine transaminase — —
Enterobacter asburiae PDN3 0.37 EX28DRAFT_3712 dihydrolipoamide dehydrogenase 0.50 EX28DRAFT_0240 Aspartate/tyrosine/aromatic aminotransferase — —
Dickeya dadantii 3937 0.37 DDA3937_RS17915 dihydrolipoyl dehydrogenase 0.49 DDA3937_RS14825 alanine transaminase — —
Escherichia coli ECRC102 0.37 NIAGMN_08340 lpdA dihydrolipoyl dehydrogenase 0.50 NIAGMN_20145 alaC alanine transaminase — —
Escherichia coli ECRC99 0.37 KEDOAH_17665 lpdA dihydrolipoyl dehydrogenase 0.50 KEDOAH_05850 alaC alanine transaminase — —
Escherichia coli ECRC101 0.37 MCAODC_01005 lpdA dihydrolipoyl dehydrogenase 0.50 MCAODC_12900 alaC alanine transaminase — —
Dickeya dianthicola ME23 0.37 DZA65_RS18990 dihydrolipoyl dehydrogenase 0.49 DZA65_RS15705 alanine transaminase — —
Escherichia coli ECRC100 0.37 OKFHMN_10490 lpdA dihydrolipoyl dehydrogenase 0.50 OKFHMN_22370 alaC alanine transaminase — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.37 GFF120 Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4) 0.50 GFF1970 Uncharacterized PLP-dependent aminotransferase YfdZ — —
Escherichia fergusonii Becca 0.37 EFB2_03929 Dihydrolipoyl dehydrogenase 0.49 EFB2_01495 Glutamate-pyruvate aminotransferase AlaC — —
Escherichia coli BW25113 0.37 b0116 lpd dihydrolipoamide dehydrogenase (NCBI) 0.49 b2379 yfdZ hypothetical protein (NCBI) — —
Escherichia coli Nissle 1917 0.37 ECOLIN_RS00650 dihydrolipoyl dehydrogenase 0.49 ECOLIN_RS13690 alanine transaminase — —
Escherichia coli BL21 0.37 ECD_00115 dihydrolipoyl dehydrogenase; E3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes; glycine cleavage system L protein; dihydrolipoamide dehydrogenase 0.49 ECD_02289 glutamate-pyruvate aminotransferase; glutamic-pyruvic transaminase (GPT); alanine transaminase — —
Enterobacter sp. TBS_079 0.36 MPMX20_00809 Dihydrolipoyl dehydrogenase 0.49 MPMX20_03277 Glutamate-pyruvate aminotransferase AlaC — —
Klebsiella michiganensis M5al 0.36 BWI76_RS04890 dihydrolipoyl dehydrogenase 0.50 BWI76_RS20495 alanine transaminase — —
Escherichia coli ECRC62 0.36 BNILDI_08775 lpdA dihydrolipoyl dehydrogenase 0.49 BNILDI_12910 alaC alanine transaminase — —
Serratia liquefaciens MT49 0.36 IAI46_21315 dihydrolipoyl dehydrogenase 0.49 IAI46_18180 alanine transaminase — —
Pantoea sp. MT58 0.36 IAI47_15800 dihydrolipoyl dehydrogenase 0.50 IAI47_05575 alanine transaminase — —
Rahnella sp. WP5 0.35 EX31_RS03465 dihydrolipoyl dehydrogenase 0.50 EX31_RS20015 alanine transaminase — —
Bifidobacterium breve UCC2003 0.27 BBR_RS13835 FAD-dependent oxidoreductase 0.24 BBR_RS13460 aminotransferase low > 34
Desulfovibrio vulgaris Hildenborough JW710 0.24 DVU1423 lpdA 2-oxoglutarate dehydrogenase, E3 component, lipoamide dehydrogenase (TIGR) 0.51 DVU0891 aminotransferase, classes I and II (TIGR) 0.47 35

Not shown: 34 genomes with orthologs for TX73_000960 only; 11 genomes with orthologs for TX73_012935 only