Conservation of cofitness between TX73_004070 and TX73_006010 in Rhodopseudomonas palustris CGA009

43 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_004070 aminotransferase class V-fold PLP-dependent enzyme 1.0 TX73_006010 excinuclease ABC subunit UvrC 0.49 15
Dinoroseobacter shibae DFL-12 0.40 Dshi_2090 Serine--glyoxylate transaminase (RefSeq) 0.51 Dshi_0644 excinuclease ABC, C subunit (RefSeq) low > 64
Phaeobacter inhibens DSM 17395 0.39 PGA1_c23940 putative serine-glyoxylate aminotransferase 0.50 PGA1_c02880 uvrABC system protein C low > 62
Cupriavidus basilensis FW507-4G11 0.35 RR42_RS30400 serine--glyoxylate aminotransferase 0.30 RR42_RS14000 excinuclease ABC subunit C low > 128
Variovorax sp. SCN45 0.33 GFF1369 Serine--glyoxylate aminotransferase (EC 2.6.1.45) 0.29 GFF2859 Excinuclease ABC subunit C low > 127
Variovorax sp. OAS795 0.32 ABID97_RS15840 aminotransferase class V-fold PLP-dependent enzyme 0.30 ABID97_RS10635 excinuclease ABC subunit UvrC low > 91
Sinorhizobium meliloti 1021 0.30 SMa2139 SgaA serine-glyoxylate aminotransferase (SGAT) 0.57 SMc00602 excinuclease ABC subunit C low > 103
Synechococcus elongatus PCC 7942 0.27 Synpcc7942_0191 Serine--glyoxylate transaminase 0.25 Synpcc7942_1945 uvrC excinuclease ABC subunit C
Desulfovibrio vulgaris Hildenborough JW710 0.17 DVU0494 aminotransferase, class V (TIGR) 0.19 DVU0801 uvrC excinuclease ABC, C subunit (TIGR)
Shewanella loihica PV-4 0.16 Shew_0294 alanine--glyoxylate transaminase (RefSeq) 0.30 Shew_1825 uvrC excinuclease ABC subunit C (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.16 CSW01_02070 alanine--glyoxylate aminotransferase family protein 0.31 CSW01_06140 excinuclease ABC subunit C low > 62
Shewanella amazonensis SB2B 0.15 Sama_3277 Serine--pyruvate transaminase (RefSeq) 0.31 Sama_1608 uvrC excinuclease ABC subunit C (RefSeq) low > 62
Magnetospirillum magneticum AMB-1 0.15 AMB_RS22510 alanine--glyoxylate aminotransferase family protein 0.50 AMB_RS19240 UvrABC system protein C low > 64
Shewanella oneidensis MR-1 0.15 SO4343 aminotransferase, class V (NCBI ptt file) 0.31 SO1861 uvrC excinuclease ABC, C subunit (NCBI ptt file) low > 76
Alteromonas macleodii MIT1002 0.15 MIT1002_02020 Purine catabolism protein PucG 0.31 MIT1002_02153 Excinuclease ABC subunit C low > 70
Shewanella sp. ANA-3 0.15 Shewana3_0360 alanine-glyoxylate aminotransferase (RefSeq) 0.31 Shewana3_1609 uvrC excinuclease ABC subunit C (RefSeq) low > 73
Klebsiella michiganensis M5al 0.14 BWI76_RS10590 class V aminotransferase 0.31 BWI76_RS18330 excinuclease ABC subunit C low > 92
Dickeya dianthicola ME23 0.14 DZA65_RS17800 alanine--glyoxylate aminotransferase family protein 0.30 DZA65_RS14285 excinuclease ABC subunit UvrC low > 75
Serratia liquefaciens MT49 0.14 IAI46_04270 alanine--glyoxylate aminotransferase family protein 0.30 IAI46_09210 excinuclease ABC subunit UvrC low > 86
Pantoea sp. MT58 0.14 IAI47_15250 alanine--glyoxylate aminotransferase family protein 0.29 IAI47_12465 excinuclease ABC subunit UvrC low > 76
Rahnella sp. WP5 0.14 EX31_RS21100 alanine--glyoxylate aminotransferase family protein 0.30 EX31_RS24150 excinuclease ABC subunit UvrC low > 89
Dickeya dianthicola 67-19 0.14 HGI48_RS16710 alanine--glyoxylate aminotransferase family protein 0.31 HGI48_RS13795 excinuclease ABC subunit UvrC low > 71
Enterobacter sp. TBS_079 0.14 MPMX20_01672 (S)-ureidoglycine--glyoxylate transaminase 0.30 MPMX20_02838 UvrABC system protein C low > 85
Pectobacterium carotovorum WPP14 0.14 HER17_RS04560 alanine--glyoxylate aminotransferase family protein 0.30 HER17_RS07715 excinuclease ABC subunit UvrC low > 75
Enterobacter asburiae PDN3 0.13 EX28DRAFT_1934 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 0.30 EX28DRAFT_0634 Excinuclease ABC subunit C low > 76
Dickeya dadantii 3937 0.13 DDA3937_RS16640 alanine--glyoxylate aminotransferase family protein 0.30 DDA3937_RS13700 excinuclease ABC subunit UvrC low > 74
Rhodospirillum rubrum S1H 0.13 Rru_A2010 Aminotransferase, class V (NCBI) 0.49 Rru_A2220 Excinuclease ABC, C subunit (NCBI) low > 58
Phocaeicola dorei CL03T12C01 0.12 ABI39_RS15035 2-aminoethylphosphonate--pyruvate transaminase 0.20 ABI39_RS05415 excinuclease ABC subunit UvrC low > 72
Xanthomonas campestris pv. campestris strain 8004 0.12 Xcc-8004.363.1 Serine--pyruvate aminotransferase (EC 2.6.1.51) / L-alanine:glyoxylate aminotransferase (EC 2.6.1.44) 0.32 Xcc-8004.2477.1 Excinuclease ABC subunit C low > 74
Bacteroides stercoris CC31F 0.12 HMPREF1181_RS13965 2-aminoethylphosphonate--pyruvate transaminase 0.20 HMPREF1181_RS02095 excinuclease ABC subunit UvrC low > 56
Phocaeicola vulgatus CL09T03C04 0.12 HMPREF1058_RS18720 2-aminoethylphosphonate--pyruvate transaminase 0.20 HMPREF1058_RS11525 excinuclease ABC subunit UvrC low > 67
Caulobacter crescentus NA1000 Δfur 0.12 CCNA_02687 serine-pyruvate aminotransferase 0.48 CCNA_02975 excinuclease ABC subunit C low > 67
Caulobacter crescentus NA1000 0.12 CCNA_02687 serine-pyruvate aminotransferase 0.48 CCNA_02975 excinuclease ABC subunit C low > 66
Bacteroides thetaiotaomicron VPI-5482 0.12 BT1718 putative 2-aminoethylphosphonate pyruvate aminotransferase (NCBI ptt file) 0.20 BT3266 excinuclease ABC subunit C (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.12 BACOVA_01426 2-aminoethylphosphonate--pyruvate transaminase 0.20 BACOVA_01365 excinuclease ABC, C subunit low > 94
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.11 GFF4333 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.30 GFF1700 Excinuclease ABC subunit C low > 78
Agrobacterium fabrum C58 0.09 Atu3217 aspartate aminotransferase 0.57 Atu1129 excinuclease ABC chain C 0.17 88
Azospirillum sp. SherDot2 0.09 MPMX19_05151 2-aminoethylphosphonate--pyruvate transaminase 0.50 MPMX19_01070 UvrABC system protein C low > 112
Pseudomonas simiae WCS417 0.08 PS417_17145 2-aminoethylphosphonate--pyruvate aminotransferase 0.33 PS417_10725 excinuclease ABC subunit C low > 88
Pseudomonas fluorescens FW300-N1B4 0.08 Pf1N1B4_3959 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.33 Pf1N1B4_5618 Excinuclease ABC subunit C low > 87
Pseudomonas fluorescens FW300-N2E3 0.08 AO353_20240 2-aminoethylphosphonate--pyruvate aminotransferase 0.33 AO353_21835 excinuclease ABC subunit C low > 101
Parabacteroides merdae CL09T00C40 0.08 HMPREF1078_RS07055 2-aminoethylphosphonate--pyruvate transaminase 0.20 HMPREF1078_RS06310 excinuclease ABC subunit UvrC low > 61
Pseudomonas fluorescens GW456-L13 0.08 PfGW456L13_2571 2-aminoethylphosphonate:pyruvate aminotransferase (EC 2.6.1.37) 0.33 PfGW456L13_2886 Excinuclease ABC subunit C low > 87
Echinicola vietnamensis KMM 6221, DSM 17526 0.07 Echvi_1811 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase 0.22 Echvi_0619 excinuclease ABC, C subunit

Not shown: 8 genomes with orthologs for TX73_004070 only; 51 genomes with orthologs for TX73_006010 only