Conservation of cofitness between TX73_009115 and TX73_004440 in Rhodopseudomonas palustris CGA009

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodopseudomonas palustris CGA009 1.0 TX73_009115 phosphoenolpyruvate carboxylase 1.0 TX73_004440 GTP-binding protein 0.47 19
Azospirillum sp. SherDot2 0.61 MPMX19_06050 Phosphoenolpyruvate carboxylase 0.25 MPMX19_01586 hypothetical protein low > 112
Dechlorosoma suillum PS 0.53 Dsui_1603 phosphoenolpyruvate carboxylase 0.43 Dsui_0589 putative GTPase, G3E family
Ralstonia sp. UNC404CL21Col 0.48 ABZR87_RS16140 phosphoenolpyruvate carboxylase 0.35 ABZR87_RS17410 GTP-binding protein low > 80
Ralstonia solanacearum IBSBF1503 0.48 RALBFv3_RS04250 phosphoenolpyruvate carboxylase 0.34 RALBFv3_RS09650 GTP-binding protein low > 76
Ralstonia solanacearum UW163 0.48 UW163_RS09420 phosphoenolpyruvate carboxylase 0.34 UW163_RS03930 GTP-binding protein
Ralstonia solanacearum GMI1000 0.48 RS_RS11840 phosphoenolpyruvate carboxylase 0.35 RS_RS00235 GTP-binding protein low > 80
Cupriavidus basilensis FW507-4G11 0.48 RR42_RS15905 phosphoenolpyruvate carboxylase 0.35 RR42_RS01040 cobalamin biosynthesis protein CobW low > 128
Ralstonia solanacearum PSI07 0.47 RPSI07_RS13100 phosphoenolpyruvate carboxylase 0.35 RPSI07_RS23715 GTP-binding protein low > 81
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS14670 phosphoenolpyruvate carboxylase 0.28 HSERO_RS23845 ATP-binding protein low > 78
Paraburkholderia graminis OAS925 0.46 ABIE53_001314 phosphoenolpyruvate carboxylase 0.36 ABIE53_000424 G3E family GTPase low > 113
Acidovorax sp. GW101-3H11 0.46 Ac3H11_3553 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.38 Ac3H11_2001 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 79
Paraburkholderia bryophila 376MFSha3.1 0.46 H281DRAFT_00197 Phosphoenolpyruvate carboxylase, type 1 0.38 H281DRAFT_02204 GTPase, G3E family low > 103
Hydrogenophaga sp. GW460-11-11-14-LB1 0.45 GFF115 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.36 GFF549 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family 0.73 6
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS05225 phosphoenolpyruvate carboxylase 0.42 BPHYT_RS01365 cobalamin biosynthesis protein CobW low > 109
Paraburkholderia sabiae LMG 24235 0.45 QEN71_RS24955 phosphoenolpyruvate carboxylase 0.36 QEN71_RS00345 GTP-binding protein low > 153
Variovorax sp. SCN45 0.45 GFF3838 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.38 GFF4488 Metal-binding GTPase YjiA low > 127
Variovorax sp. OAS795 0.44 ABID97_RS08220 phosphoenolpyruvate carboxylase 0.38 ABID97_RS06160 GTP-binding protein low > 91
Castellaniella sp019104865 MT123 0.41 ABCV34_RS14805 phosphoenolpyruvate carboxylase 0.38 ABCV34_RS13425 GTP-binding protein low > 48
Brevundimonas sp. GW460-12-10-14-LB2 0.40 A4249_RS12510 phosphoenolpyruvate carboxylase 0.56 A4249_RS14930 GTP-binding protein
Caulobacter crescentus NA1000 0.31 CCNA_01560 phosphoenolpyruvate carboxylase 0.53 CCNA_00323 low-affinity zinc transport protein low > 66
Caulobacter crescentus NA1000 Δfur 0.31 CCNA_01560 phosphoenolpyruvate carboxylase 0.53 CCNA_00323 low-affinity zinc transport protein low > 67
Synechococcus elongatus PCC 7942 0.25 Synpcc7942_2252 ppc phosphoenolpyruvate carboxylase 0.31 Synpcc7942_0956 hypothetical protein
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.24 GFF2342 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.25 GFF1006 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 78
Pseudomonas putida KT2440 0.24 PP_1505 Phosphoenolpyruvate carboxylase 0.32 PP_4639 P-loop guanosine triphosphatase-dependent zinc chaperone low > 96
Escherichia fergusonii Becca 0.24 EFB2_04658 Phosphoenolpyruvate carboxylase 0.25 EFB2_04096 P-loop guanosine triphosphatase YjiA low > 86
Escherichia coli ECOR38 0.24 HEPCGN_12240 ppc phosphoenolpyruvate carboxylase 0.25 HEPCGN_09435 yjiA GTPase low > 87
Escherichia coli BW25113 0.24 b3956 ppc phosphoenolpyruvate carboxylase (NCBI) 0.26 b4352 yjiA orf, hypothetical protein (VIMSS) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.24 OHPLBJKB_04094 Phosphoenolpyruvate carboxylase 0.25 OHPLBJKB_03722 putative GTP-binding protein YjiA low > 73
Escherichia coli Nissle 1917 0.24 ECOLIN_RS22835 phosphoenolpyruvate carboxylase 0.26 ECOLIN_RS24980 GTPase low > 55
Escherichia coli ECRC62 0.24 BNILDI_05785 ppc phosphoenolpyruvate carboxylase 0.25 BNILDI_07825 yjiA GTPase low > 75
Escherichia coli BL21 0.24 ECD_03841 phosphoenolpyruvate carboxylase 0.26 ECD_04218 metal-binding GTPase low > 61
Escherichia coli ECOR27 0.24 NOLOHH_05740 ppc phosphoenolpyruvate carboxylase 0.25 NOLOHH_03775 yjiA GTPase low > 75
Escherichia coli ECRC101 0.24 MCAODC_04095 ppc phosphoenolpyruvate carboxylase 0.26 MCAODC_01910 yjiA GTPase low > 87
Escherichia coli ECRC98 0.24 JDDGAC_17220 ppc phosphoenolpyruvate carboxylase 0.26 JDDGAC_14990 yjiA GTPase low > 86
Escherichia coli ECRC100 0.24 OKFHMN_13595 ppc phosphoenolpyruvate carboxylase 0.26 OKFHMN_11395 yjiA GTPase low > 80
Pseudomonas sp. RS175 0.24 PFR28_00368 Phosphoenolpyruvate carboxylase 0.32 PFR28_03788 P-loop guanosine triphosphatase YjiA low > 88
Enterobacter asburiae PDN3 0.24 EX28DRAFT_4418 Phosphoenolpyruvate carboxylase, type 1 (EC 4.1.1.31) 0.26 EX28DRAFT_3534 Putative GTPases (G3E family) low > 76
Escherichia coli ECRC99 0.24 KEDOAH_14565 ppc phosphoenolpyruvate carboxylase 0.25 KEDOAH_16750 yjiA GTPase
Escherichia coli ECRC102 0.24 NIAGMN_11345 ppc phosphoenolpyruvate carboxylase 0.26 NIAGMN_09245 yjiA GTPase
Enterobacter sp. TBS_079 0.24 MPMX20_04524 Phosphoenolpyruvate carboxylase 0.25 MPMX20_00629 P-loop guanosine triphosphatase YjiA low > 85
Pectobacterium carotovorum WPP14 0.24 HER17_RS20655 phosphoenolpyruvate carboxylase 0.28 HER17_RS15645 GTPase low > 75
Serratia liquefaciens MT49 0.24 IAI46_24525 phosphoenolpyruvate carboxylase 0.25 IAI46_02540 GTPase low > 86
Rahnella sp. WP5 0.24 EX31_RS14200 phosphoenolpyruvate carboxylase 0.26 EX31_RS00785 GTPase low > 89
Pseudomonas fluorescens FW300-N2C3 0.24 AO356_06185 phosphoenolpyruvate carboxylase 0.31 AO356_15700 GTP-binding protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.24 Pf1N1B4_3051 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.31 Pf1N1B4_2773 COG0523: Putative GTPases (G3E family) low > 87
Pseudomonas fluorescens FW300-N2E2 0.24 Pf6N2E2_3103 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.32 Pf6N2E2_5080 Putative metal chaperone, involved in Zn homeostasis, GTPase of COG0523 family low > 103
Pseudomonas fluorescens SBW25 0.24 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.32 PFLU_RS26200 GTPase low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS06130 phosphoenolpyruvate carboxylase 0.32 PFLU_RS26200 GTPase low > 109
Klebsiella michiganensis M5al 0.24 BWI76_RS00835 phosphoenolpyruvate carboxylase 0.25 BWI76_RS03810 GTPase low > 92
Pseudomonas fluorescens GW456-L13 0.23 PfGW456L13_4740 Phosphoenolpyruvate carboxylase (EC 4.1.1.31) 0.31 PfGW456L13_1446 COG0523: Putative GTPases (G3E family) low > 87
Pseudomonas fluorescens FW300-N2E3 0.23 AO353_16310 phosphoenolpyruvate carboxylase 0.31 AO353_14000 GTP-binding protein low > 101
Pseudomonas simiae WCS417 0.23 PS417_06060 phosphoenolpyruvate carboxylase 0.32 PS417_24285 GTP-binding protein low > 88
Dickeya dianthicola 67-19 0.23 HGI48_RS00850 phosphoenolpyruvate carboxylase 0.28 HGI48_RS16450 GTPase low > 71
Pseudomonas sp. S08-1 0.23 OH686_06795 Phosphoenolpyruvate carboxylase 0.30 OH686_16220 Metal-binding GTPase YjiA low > 80
Dickeya dadantii 3937 0.23 DDA3937_RS20360 phosphoenolpyruvate carboxylase 0.28 DDA3937_RS16350 GTPase low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.23 Psyr_1318 Phosphoenolpyruvate carboxylase 0.31 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K low > 86
Pseudomonas syringae pv. syringae B728a 0.23 Psyr_1318 Phosphoenolpyruvate carboxylase 0.31 Psyr_4271 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K low > 86
Dickeya dianthicola ME23 0.23 DZA65_RS00895 phosphoenolpyruvate carboxylase 0.28 DZA65_RS17535 GTPase low > 75

Not shown: 23 genomes with orthologs for TX73_009115 only; 7 genomes with orthologs for TX73_004440 only