Conservation of cofitness between SMc00114 and SMc01858 in Sinorhizobium meliloti 1021

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Sinorhizobium meliloti 1021 1.0 SMc00114 protease II oligopeptidase B hydrolase serine protease 1.0 SMc01858 S-adenosyl-methyltransferase MraW 0.59 14
Rhizobium sp. OAE497 0.85 ABIE40_RS04845 S9 family peptidase 0.76 ABIE40_RS11875 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 107
Agrobacterium fabrum C58 0.79 Atu0897 protease II 0.82 Atu2102 S-adenosyl methionine-dependent methytransferase — —
Rhodopseudomonas palustris CGA009 0.55 TX73_008065 S9 family peptidase 0.49 TX73_018335 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 86
Bosea sp. OAE506 0.53 ABIE41_RS22470 S9 family peptidase 0.48 ABIE41_RS12560 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 77
Caulobacter crescentus NA1000 0.50 CCNA_00985 protease II PtrB 0.43 CCNA_02645 S-adenosyl-methyltransferase MraW — —
Caulobacter crescentus NA1000 Δfur 0.50 CCNA_00985 protease II PtrB 0.43 CCNA_02645 S-adenosyl-methyltransferase MraW low > 67
Brevundimonas sp. GW460-12-10-14-LB2 0.49 A4249_RS06115 S9 family peptidase 0.47 A4249_RS01485 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Pontibacter actiniarum KMM 6156, DSM 19842 0.41 CA264_12915 oligopeptidase B 0.28 CA264_10865 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Kangiella aquimarina DSM 16071 0.39 B158DRAFT_2324 Protease II 0.32 B158DRAFT_2114 S-adenosyl-methyltransferase MraW low > 40
Echinicola vietnamensis KMM 6221, DSM 17526 0.39 Echvi_2305 Protease II 0.29 Echvi_0317 S-adenosyl-methyltransferase MraW — —
Pedobacter sp. GW460-11-11-14-LB5 0.38 CA265_RS20860 oligopeptidase B 0.25 CA265_RS01965 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Sphingomonas koreensis DSMZ 15582 0.38 Ga0059261_1842 Protease II 0.42 Ga0059261_3455 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Alteromonas macleodii MIT1002 0.36 MIT1002_02578 Protease 2 0.34 MIT1002_03033 Ribosomal RNA small subunit methyltransferase H low > 70
Xanthomonas campestris pv. campestris strain 8004 0.35 Xcc-8004.842.1 Protease II (EC 3.4.21.83) 0.32 Xcc-8004.4363.1 rRNA small subunit methyltransferase H — —
Shewanella sp. ANA-3 0.34 Shewana3_0135 oligopeptidase B (RefSeq) 0.34 Shewana3_3751 mraW S-adenosyl-methyltransferase MraW (RefSeq) — —
Rahnella sp. WP5 0.34 EX31_RS24750 prolyl oligopeptidase family serine peptidase 0.34 EX31_RS03645 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 89
Shewanella oneidensis MR-1 0.34 SO0144 ptrB protease II (NCBI ptt file) 0.34 SO4227 conserved hypothetical protein TIGR00006 (NCBI ptt file) low > 76
Serratia liquefaciens MT49 0.33 IAI46_09975 prolyl oligopeptidase family serine peptidase 0.32 IAI46_03400 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Shewanella amazonensis SB2B 0.32 Sama_0144 oligopeptidase B (RefSeq) 0.34 Sama_0346 mraW S-adenosyl-methyltransferase MraW (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.32 OHPLBJKB_01886 Protease 2 0.33 OHPLBJKB_03577 Ribosomal RNA small subunit methyltransferase H — —
Escherichia fergusonii Becca 0.32 EFB2_02099 Protease 2 0.33 EFB2_03965 Ribosomal RNA small subunit methyltransferase H low > 86
Escherichia coli ECRC102 0.32 NIAGMN_01680 ptrB oligopeptidase B 0.33 NIAGMN_08525 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Escherichia coli ECRC100 0.32 OKFHMN_26380 ptrB oligopeptidase B 0.33 OKFHMN_10675 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Escherichia coli ECOR38 0.32 HEPCGN_04780 ptrB oligopeptidase B 0.33 HEPCGN_08655 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Escherichia coli ECRC99 0.32 KEDOAH_01725 ptrB oligopeptidase B 0.33 KEDOAH_17480 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Escherichia coli ECRC62 0.32 BNILDI_15685 ptrB oligopeptidase B 0.33 BNILDI_08590 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 75
Escherichia coli ECOR27 0.32 NOLOHH_16890 ptrB oligopeptidase B 0.33 NOLOHH_03020 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 75
Escherichia coli ECRC101 0.32 MCAODC_19025 ptrB oligopeptidase B 0.33 MCAODC_01190 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Escherichia coli ECRC98 0.32 JDDGAC_00955 ptrB oligopeptidase B 0.33 JDDGAC_14270 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 86
Escherichia coli BL21 0.32 ECD_01816 protease II 0.33 ECD_00083 16S rRNA m(4)C1402 methyltransferase, SAM-dependent — —
Escherichia coli BW25113 0.32 b1845 ptrB protease II (NCBI) 0.33 b0082 mraW S-adenosyl-methyltransferase (NCBI) low > 76
Enterobacter sp. TBS_079 0.32 MPMX20_02752 Protease 2 0.33 MPMX20_00775 Ribosomal RNA small subunit methyltransferase H low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.31 GFF1624 Protease II (EC 3.4.21.83) 0.34 GFF156 rRNA small subunit methyltransferase H low > 78
Enterobacter asburiae PDN3 0.31 EX28DRAFT_0709 Protease II 0.33 EX28DRAFT_3677 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Pseudomonas sp. RS175 0.31 PFR28_00723 Dipeptidyl aminopeptidase BI 0.34 PFR28_03595 Ribosomal RNA small subunit methyltransferase H — —
Pectobacterium carotovorum WPP14 0.31 HER17_RS11765 prolyl oligopeptidase family serine peptidase 0.33 HER17_RS03120 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Pantoea sp. MT58 0.31 IAI47_08515 prolyl oligopeptidase family serine peptidase 0.32 IAI47_15970 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 76
Pseudomonas syringae pv. syringae B728a ΔmexB 0.31 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 0.32 Psyr_4110 methyltransferase — —
Pseudomonas syringae pv. syringae B728a 0.31 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 0.32 Psyr_4110 methyltransferase — —
Klebsiella michiganensis M5al 0.31 BWI76_RS18075 oligopeptidase B 0.33 BWI76_RS04720 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Pseudomonas stutzeri RCH2 0.31 Psest_2655 Protease II 0.35 Psest_3267 S-adenosyl-methyltransferase MraW — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_04360 peptidase S9 0.34 AO356_17120 ribosomal RNA small subunit methyltransferase H — —
Dickeya dianthicola 67-19 0.31 HGI48_RS10180 prolyl oligopeptidase family serine peptidase 0.32 HGI48_RS18015 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 71
Dickeya dianthicola ME23 0.31 DZA65_RS10595 prolyl oligopeptidase family serine peptidase 0.32 DZA65_RS19160 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 75
Pseudomonas putida KT2440 0.31 PP_4583 putative Peptidase 0.33 PP_1329 Ribosomal RNA small subunit methyltransferase H — —
Dickeya dadantii 3937 0.31 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase 0.32 DDA3937_RS18080 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH low > 74
Pseudomonas fluorescens FW300-N1B4 0.30 Pf1N1B4_3357 Protease II (EC 3.4.21.83) 0.34 Pf1N1B4_951 rRNA small subunit methyltransferase H — —
Pseudomonas sp. S08-1 0.30 OH686_05270 Protease II 0.34 OH686_08330 16S rRNA (cytosine(1402)-N(4))-methyltransferase — —
Shewanella loihica PV-4 0.30 Shew_0039 oligopeptidase B (RefSeq) 0.35 Shew_3461 mraW S-adenosyl-methyltransferase MraW (RefSeq) — —
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_17950 peptidase S9 0.34 AO353_15300 ribosomal RNA small subunit methyltransferase H — —
Pseudomonas fluorescens GW456-L13 0.30 PfGW456L13_4484 Protease II (EC 3.4.21.83) 0.34 PfGW456L13_1645 rRNA small subunit methyltransferase H — —
Pseudomonas simiae WCS417 0.29 PS417_07445 peptidase S9 0.33 PS417_04600 16S rRNA methyltransferase — —
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS07530 S9 family peptidase 0.33 PFLU_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Pseudomonas fluorescens SBW25 0.29 PFLU_RS07530 S9 family peptidase 0.33 PFLU_RS04665 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Vibrio cholerae E7946 ATCC 55056 0.17 CSW01_14340 S9 family peptidase 0.31 CSW01_12200 ribosomal RNA small subunit methyltransferase H low > 62
Rhodanobacter denitrificans FW104-10B01 0.13 LRK54_RS07925 prolyl oligopeptidase family serine peptidase 0.33 LRK54_RS12205 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Rhodanobacter denitrificans MT42 0.13 LRK55_RS07655 prolyl oligopeptidase family serine peptidase 0.33 LRK55_RS11940 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Rhodanobacter sp. FW510-T8 0.13 OKGIIK_14405 Peptidase S9 0.34 OKGIIK_11720 rsmH 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase 0.33 ABZR86_RS11365 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH — —

Not shown: 2 genomes with orthologs for SMc00114 only; 40 genomes with orthologs for SMc01858 only