Conservation of cofitness between RS_RS14920 and RS_RS02015 in Ralstonia solanacearum GMI1000

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Ralstonia solanacearum GMI1000 1.0 RS_RS14920 iron donor protein CyaY 1.0 RS_RS02015 ribosomal subunit interface protein 0.78 16
Ralstonia solanacearum PSI07 0.98 RPSI07_RS10260 iron donor protein CyaY 0.96 RPSI07_RS22135 ribosomal subunit interface protein 0.47 42
Ralstonia solanacearum UW163 0.94 UW163_RS06635 iron donor protein CyaY 0.97 UW163_RS02415 ribosomal subunit interface protein — —
Ralstonia solanacearum IBSBF1503 0.94 RALBFv3_RS06980 iron donor protein CyaY 0.97 RALBFv3_RS11165 ribosomal subunit interface protein 0.60 33
Ralstonia sp. UNC404CL21Col 0.86 ABZR87_RS02630 iron donor protein CyaY 0.94 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA low > 80
Cupriavidus basilensis FW507-4G11 0.65 RR42_RS19045 frataxin 0.87 RR42_RS02080 ribosome hibernation promoting factor low > 128
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS17920 protein CyaY 0.68 BPHYT_RS02900 ribosome hibernation promoting factor low > 109
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS28070 iron donor protein CyaY 0.72 QEN71_RS01750 ribosome-associated translation inhibitor RaiA low > 153
Paraburkholderia graminis OAS925 0.50 ABIE53_003747 CyaY protein 0.68 ABIE53_000717 putative sigma-54 modulation protein — —
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_05608 CyaY protein 0.69 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P — —
Variovorax sp. OAS795 0.47 ABID97_RS23295 iron donor protein CyaY 0.60 ABID97_RS04490 ribosome-associated translation inhibitor RaiA — —
Shewanella oneidensis MR-1 0.45 SO4311 cyaY cyay protein (NCBI ptt file) 0.41 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.45 Shewana3_0388 frataxin family protein (RefSeq) 0.42 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_00625 iron donor protein CyaY 0.31 CSW01_12820 ribosome hibernation promoting factor — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF1339 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.59 GFF2612 Ribosome hibernation protein YhbH 0.71 19
Dechlorosoma suillum PS 0.43 Dsui_1184 iron donor protein CyaY 0.49 Dsui_0703 ribosomal subunit interface protein — —
Shewanella amazonensis SB2B 0.43 Sama_3252 CyaY protein (RefSeq) 0.43 Sama_3089 ribosomal subunit interface protein (RefSeq) — —
Shewanella loihica PV-4 0.42 Shew_0320 frataxin family protein (RefSeq) 0.42 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) low > 60
Dickeya dianthicola ME23 0.42 DZA65_RS21110 iron donor protein CyaY 0.32 DZA65_RS01505 ribosome hibernation promoting factor low > 75
Acidovorax sp. GW101-3H11 0.41 Ac3H11_4699 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.60 Ac3H11_681 Ribosome hibernation protein YhbH — —
Dickeya dianthicola 67-19 0.41 HGI48_RS20065 iron donor protein CyaY 0.32 HGI48_RS01440 ribosome hibernation promoting factor — —
Dickeya dadantii 3937 0.40 DDA3937_RS19910 iron donor protein CyaY 0.31 DDA3937_RS01525 ribosome hibernation promoting factor low > 74
Variovorax sp. SCN45 0.39 GFF5317 Frataxin homolog CyaY, facilitates Fe-S cluster assembly, interacts with IscS 0.60 GFF7293 Ribosome hibernation promoting factor Hpf low > 127
Pectobacterium carotovorum WPP14 0.39 HER17_RS01330 iron donor protein CyaY 0.36 HER17_RS20065 ribosome hibernation promoting factor low > 75
Kangiella aquimarina DSM 16071 0.37 B158DRAFT_0248 iron donor protein CyaY 0.40 B158DRAFT_2079 ribosomal subunit interface protein low > 40
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.36 GFF233 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.30 GFF2947 Ribosome hibernation protein YhbH low > 78
Enterobacter sp. TBS_079 0.35 MPMX20_04468 Iron-sulfur cluster assembly protein CyaY 0.28 MPMX20_04109 Ribosome hibernation promoting factor low > 85
Escherichia coli Nissle 1917 0.34 ECOLIN_RS21845 iron donor protein CyaY 0.30 ECOLIN_RS18430 ribosome hibernation promoting factor low > 55
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_04246 Iron-sulfur cluster assembly protein CyaY 0.30 OHPLBJKB_00497 Ribosome hibernation promoting factor low > 73
Serratia liquefaciens MT49 0.34 IAI46_00705 iron donor protein CyaY 0.36 IAI46_22475 ribosome hibernation promoting factor low > 86
Enterobacter asburiae PDN3 0.33 EX28DRAFT_4476 iron donor protein CyaY 0.27 EX28DRAFT_3257 ribosomal subunit interface protein — —
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_2176 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.38 Pf1N1B4_1081 Ribosome hibernation protein YhbH low > 87
Pseudomonas sp. RS175 0.33 PFR28_04373 Iron-sulfur cluster assembly protein CyaY 0.39 PFR28_00172 Ribosome hibernation promoting factor low > 88
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_848 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.39 PfGW456L13_5015 Ribosome hibernation protein YhbH low > 87
Escherichia coli ECOR38 0.32 HEPCGN_13160 cyaY iron donor protein CyaY 0.30 HEPCGN_16810 Ribosome hibernation promoting factor low > 87
Pseudomonas fluorescens FW300-N2E2 0.32 Pf6N2E2_4422 Frataxin homolog CyaY, facilitates iron supply for heme A synthesis or Fe-S cluster assembly 0.38 Pf6N2E2_3268 Ribosome hibernation protein YhbH low > 103
Escherichia fergusonii Becca 0.32 EFB2_04831 Iron-sulfur cluster assembly protein CyaY 0.30 EFB2_00620 Ribosome hibernation promoting factor low > 86
Escherichia coli BL21 0.32 ECD_03682 iron-dependent inhibitor of iron-sulfur cluster formation; frataxin; iron-binding and oxidizing protein 0.30 ECD_03068 ribosome hibernation promoting factor HPF; stabilizes 100S dimers — —
Escherichia coli BW25113 0.32 b3807 cyaY frataxin-like protein (NCBI) 0.30 b3203 yhbH predicted ribosome-associated, sigma 54 modulation protein (NCBI) low > 76
Escherichia coli ECOR27 0.32 NOLOHH_06585 cyaY iron donor protein CyaY 0.30 NOLOHH_09735 Ribosome hibernation promoting factor low > 75
Escherichia coli ECRC62 0.32 BNILDI_04950 cyaY iron donor protein CyaY 0.30 BNILDI_01800 Ribosome hibernation promoting factor — —
Pseudomonas fluorescens FW300-N2C3 0.31 AO356_12745 iron donor protein CyaY 0.38 AO356_07040 hypothetical protein low > 104
Klebsiella michiganensis M5al 0.31 BWI76_RS01190 iron donor protein CyaY 0.33 BWI76_RS25270 ribosome hibernation promoting factor low > 92
Escherichia coli ECRC99 0.31 KEDOAH_13710 cyaY iron donor protein CyaY 0.30 KEDOAH_10215 Ribosome hibernation promoting factor — —
Escherichia coli ECRC102 0.31 NIAGMN_12195 cyaY iron donor protein CyaY 0.30 NIAGMN_15695 Ribosome hibernation promoting factor — —
Escherichia coli ECRC101 0.31 MCAODC_04945 cyaY iron donor protein CyaY 0.30 MCAODC_08455 Ribosome hibernation promoting factor low > 87
Escherichia coli ECRC98 0.31 JDDGAC_18065 cyaY iron donor protein CyaY 0.30 JDDGAC_21560 Ribosome hibernation promoting factor low > 86
Escherichia coli ECRC100 0.31 OKFHMN_14440 cyaY iron donor protein CyaY 0.30 OKFHMN_17935 Ribosome hibernation promoting factor low > 80
Pseudomonas stutzeri RCH2 0.30 Psest_3762 iron donor protein CyaY 0.42 Psest_3314 ribosomal subunit interface protein low > 67
Pseudomonas fluorescens FW300-N2E3 0.30 AO353_09030 iron donor protein CyaY 0.37 AO353_05185 hypothetical protein low > 101
Pseudomonas simiae WCS417 0.30 PS417_27570 frataxin 0.41 PS417_04340 ribosome hibernation promoting factor HPF — —
Pseudomonas syringae pv. syringae B728a 0.29 Psyr_0180 Frataxin-like protein 0.41 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.29 Psyr_0180 Frataxin-like protein 0.41 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P low > 86
Pseudomonas fluorescens SBW25-INTG 0.29 PFLU_RS29255 iron donor protein CyaY 0.38 PFLU_RS04395 ribosome-associated translation inhibitor RaiA low > 109
Pseudomonas fluorescens SBW25 0.29 PFLU_RS29255 iron donor protein CyaY 0.38 PFLU_RS04395 ribosome-associated translation inhibitor RaiA low > 109
Pseudomonas putida KT2440 0.28 PP_5225 frataxin 0.37 PP_0951 Ribosome hibernation promoting factor low > 96
Pseudomonas sp. S08-1 0.26 OH686_13815 iron donor protein CyaY 0.40 OH686_08550 Ribosome hibernation promoting factor Hpf low > 80

Not shown: 2 genomes with orthologs for RS_RS14920 only; 14 genomes with orthologs for RS_RS02015 only