Conservation of cofitness between RR42_RS12255 and RR42_RS19735 in Cupriavidus basilensis FW507-4G11

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS12255 sulfate/thiosulfate transporter permease subunit 1.0 RR42_RS19735 hypothetical protein 0.44 6
Ralstonia solanacearum PSI07 0.71 RPSI07_RS17395 sulfate ABC transporter permease subunit CysW 0.55 RPSI07_RS08735 YraN family protein low > 81
Ralstonia sp. UNC404CL21Col 0.71 ABZR87_RS11545 sulfate ABC transporter permease subunit CysW 0.54 ABZR87_RS03810 YraN family protein low > 80
Variovorax sp. OAS795 0.70 ABID97_RS15580 sulfate ABC transporter permease subunit CysW 0.45 ABID97_RS00280 YraN family protein low > 91
Ralstonia solanacearum UW163 0.70 UW163_RS13420 sulfate ABC transporter permease subunit CysW 0.54 UW163_RS05120 YraN family protein — —
Ralstonia solanacearum IBSBF1503 0.70 RALBFv3_RS00090 sulfate ABC transporter permease subunit CysW 0.54 RALBFv3_RS08490 YraN family protein low > 76
Variovorax sp. SCN45 0.70 GFF1289 Sulfate transport system permease protein CysW 0.45 GFF3736 UPF0102 protein YraN low > 127
Ralstonia solanacearum GMI1000 0.69 RS_RS06750 sulfate ABC transporter permease subunit CysW 0.52 RS_RS16355 YraN family protein low > 80
Herbaspirillum seropedicae SmR1 0.68 HSERO_RS08235 sulfate ABC transporter permease 0.48 HSERO_RS23355 hypothetical protein — —
Hydrogenophaga sp. GW460-11-11-14-LB1 0.67 GFF5098 Sulfate transport system permease protein CysW 0.49 GFF2716 Predicted endonuclease distantly related to archaeal Holliday junction resolvase — —
Acinetobacter radioresistens SK82 0.66 MPMX26_02169 Sulfate transport system permease protein CysW 0.29 MPMX26_02280 hypothetical protein — —
Acidovorax sp. GW101-3H11 0.61 Ac3H11_910 Sulfate transport system permease protein CysW 0.42 Ac3H11_4467 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 79
Shewanella oneidensis MR-1 0.59 SO4654 cysW-2 sulfate ABC transporter, permease protein (NCBI ptt file) 0.39 SO0299 conserved hypothetical protein TIGR00252 (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.59 Dsui_0259 sulfate ABC transporter, permease protein CysW 0.43 Dsui_0252 TIGR00252 family protein low > 51
Rhodanobacter sp. FW510-T8 0.58 OKGIIK_10925 cysW sulfate ABC transporter permease subunit CysW 0.41 OKGIIK_11745 yraN YraN family protein low > 52
Pseudomonas putida KT2440 0.57 PP_5169 sulfate ABC transporter, inner membrane subunit CysW 0.45 PP_1324 putative endonuclease distantly related to archaeal Holliday junction resolvase low > 96
Pseudomonas stutzeri RCH2 0.56 Psest_4062 sulfate ABC transporter, permease protein CysW 0.41 Psest_3272 TIGR00252 family protein low > 67
Pectobacterium carotovorum WPP14 0.56 HER17_RS05680 sulfate ABC transporter permease subunit CysW 0.36 HER17_RS19870 YraN family protein low > 75
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_0082 Binding-protein-dependent transport systems inner membrane component 0.39 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_0082 Binding-protein-dependent transport systems inner membrane component 0.39 Psyr_4114 Protein of unknown function UPF0102 low > 86
Pseudomonas simiae WCS417 0.54 PS417_00940 sulfate ABC transporter permease 0.39 PS417_04580 hypothetical protein low > 88
Pseudomonas fluorescens SBW25-INTG 0.54 PFLU_RS00955 sulfate ABC transporter permease subunit CysW 0.40 PFLU_RS04645 YraN family protein low > 109
Pseudomonas fluorescens SBW25 0.54 PFLU_RS00955 sulfate ABC transporter permease subunit CysW 0.40 PFLU_RS04645 YraN family protein low > 109
Pseudomonas sp. RS175 0.54 PFR28_04764 Sulfate transport system permease protein CysW 0.39 PFR28_03599 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4003 Sulfate transport system permease protein CysW 0.39 Pf6N2E2_5344 Predicted endonuclease distantly related to archaeal Holliday junction resolvase 0.20 48
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_484 Sulfate transport system permease protein CysW 0.38 PfGW456L13_1641 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 87
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_10675 sulfate ABC transporter permease 0.38 AO356_17100 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N1B4 0.54 Pf1N1B4_1725 Sulfate transport system permease protein CysW 0.39 Pf1N1B4_955 Predicted endonuclease distantly related to archaeal Holliday junction resolvase — —
Marinobacter adhaerens HP15 0.53 HP15_1346 sulfate ABC transporter, inner membrane subunit CysW 0.31 HP15_551 hypothetical protein low > 73
Dickeya dianthicola 67-19 0.51 HGI48_RS15980 sulfate ABC transporter permease subunit CysW 0.37 HGI48_RS01600 YraN family protein low > 71
Dickeya dadantii 3937 0.51 DDA3937_RS15840 sulfate ABC transporter permease subunit CysW 0.38 DDA3937_RS01705 YraN family protein low > 74
Dickeya dianthicola ME23 0.50 DZA65_RS17065 sulfate ABC transporter permease subunit CysW 0.38 DZA65_RS01675 YraN family protein low > 75
Xanthomonas campestris pv. campestris strain 8004 0.50 Xcc-8004.4085.1 Sulfate transport system permease protein CysW 0.30 Xcc-8004.4374.1 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 74
Pantoea sp. MT58 0.50 IAI47_05395 sulfate/thiosulfate ABC transporter permease CysW 0.32 IAI47_02840 YraN family protein low > 76
Escherichia coli ECRC99 0.50 KEDOAH_06060 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 KEDOAH_09925 yraN YraN family protein — —
Escherichia coli ECRC102 0.50 NIAGMN_19930 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 NIAGMN_15985 yraN YraN family protein — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.50 GFF2057 Sulfate transport system permease protein CysW 0.40 GFF1519 Predicted endonuclease distantly related to archaeal Holliday junction resolvase low > 78
Klebsiella michiganensis M5al 0.50 BWI76_RS20695 sulfate/thiosulfate transporter permease subunit 0.39 BWI76_RS24920 YraN family protein low > 92
Escherichia coli ECRC98 0.50 JDDGAC_26110 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 JDDGAC_21850 yraN YraN family protein low > 86
Escherichia coli ECRC100 0.50 OKFHMN_22160 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 OKFHMN_18225 yraN YraN family protein low > 80
Lysobacter sp. OAE881 0.50 ABIE51_RS01845 sulfate ABC transporter permease subunit CysW 0.31 ABIE51_RS04685 YraN family protein low > 62
Rahnella sp. WP5 0.50 EX31_RS20215 sulfate/thiosulfate ABC transporter permease CysW 0.45 EX31_RS12540 YraN family protein low > 89
Escherichia coli ECRC101 0.50 MCAODC_12690 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 MCAODC_08745 yraN YraN family protein low > 87
Escherichia coli ECOR38 0.50 HEPCGN_21335 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 HEPCGN_17100 yraN YraN family protein low > 87
Escherichia coli BW25113 0.50 b2423 cysW sulfate/thiosulfate transporter subunit (NCBI) 0.40 b3148 yraN hypothetical protein (NCBI) low > 76
Escherichia coli ECOR27 0.50 NOLOHH_13840 cysW sulfate/thiosulfate ABC transporter permease CysW 0.40 NOLOHH_10025 yraN YraN family protein low > 75
Escherichia coli Nissle 1917 0.50 ECOLIN_RS13910 sulfate/thiosulfate ABC transporter permease CysW 0.40 ECOLIN_RS18095 YraN family protein low > 55
Escherichia fergusonii Becca 0.50 EFB2_01454 Sulfate transport system permease protein CysW 0.40 EFB2_00675 hypothetical protein low > 86
Escherichia coli ECRC62 0.50 BNILDI_12705 cysW sulfate/thiosulfate ABC transporter permease CysW 0.41 BNILDI_01505 yraN YraN family protein low > 75
Enterobacter asburiae PDN3 0.49 EX28DRAFT_0207 sulfate ABC transporter, permease protein CysW 0.39 EX28DRAFT_3197 TIGR00252 family protein low > 76
Escherichia coli BL21 0.49 ECD_02323 sulfate/thiosulfate ABC transporter permease 0.40 ECD_03015 UPF0102 family protein low > 61
Serratia liquefaciens MT49 0.49 IAI46_18500 sulfate/thiosulfate ABC transporter permease CysW 0.42 IAI46_22305 YraN family protein low > 86
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS02890 sulfate ABC transporter permease subunit CysW 0.41 ABZR86_RS11390 YraN family protein low > 74
Shewanella sp. ANA-3 0.48 Shewana3_3191 sulfate ABC transporter, inner membrane subunit CysW (RefSeq) 0.39 Shewana3_3881 hypothetical protein (RefSeq) low > 73
Erwinia tracheiphila SCR3 0.47 LU632_RS06685 cysW sulfate/thiosulfate ABC transporter permease CysW 0.37 LU632_RS02220 YraN family protein low > 74
Vibrio cholerae E7946 ATCC 55056 0.44 CSW01_02860 sulfate ABC transporter permease subunit CysW 0.35 CSW01_03080 YraN family protein low > 62

Not shown: 21 genomes with orthologs for RR42_RS12255 only; 12 genomes with orthologs for RR42_RS19735 only