| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS11930 | | succinyldiaminopimelate aminotransferase | 1.0 | RR42_RS18150 | | long-chain fatty acid--CoA ligase | 0.55 | 1 |
| Ralstonia solanacearum GMI1000 | 0.77 | RS_RS06990 | | succinyldiaminopimelate transaminase | 0.83 | RS_RS14290 | | long-chain-fatty-acid--CoA ligase | low | > 80 |
| Ralstonia sp. UNC404CL21Col | 0.76 | ABZR87_RS11770 | | succinyldiaminopimelate transaminase | 0.82 | ABZR87_RS02020 | | long-chain fatty acid--CoA ligase | 0.45 | 66 |
| Ralstonia solanacearum IBSBF1503 | 0.76 | RALBFv3_RS00320 | | succinyldiaminopimelate transaminase | 0.83 | RALBFv3_RS06340 | | long-chain-fatty-acid--CoA ligase | low | > 76 |
| Ralstonia solanacearum UW163 | 0.76 | UW163_RS13650 | | succinyldiaminopimelate transaminase | 0.83 | UW163_RS07285 | | long-chain-fatty-acid--CoA ligase | — | — |
| Ralstonia solanacearum PSI07 | 0.76 | RPSI07_RS17155 | | succinyldiaminopimelate transaminase | 0.83 | RPSI07_RS10900 | | long-chain-fatty-acid--CoA ligase | 0.65 | 3 |
| Burkholderia phytofirmans PsJN | 0.72 | BPHYT_RS12185 | | succinyldiaminopimelate aminotransferase | 0.74 | BPHYT_RS17295 | | long-chain fatty acid--CoA ligase | low | > 109 |
| Paraburkholderia sabiae LMG 24235 | 0.71 | QEN71_RS06370 | | succinyldiaminopimelate transaminase | 0.72 | QEN71_RS27455 | | long-chain fatty acid--CoA ligase | low | > 153 |
| Paraburkholderia bryophila 376MFSha3.1 | 0.70 | H281DRAFT_00600 | | succinyldiaminopimelate aminotransferase apoenzyme | 0.74 | H281DRAFT_06226 | | long-chain acyl-CoA synthetase | low | > 103 |
| Herbaspirillum seropedicae SmR1 | 0.69 | HSERO_RS10805 | | succinyldiaminopimelate aminotransferase | 0.71 | HSERO_RS19285 | | long-chain fatty acid--CoA ligase | low | > 78 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.65 | GFF4553 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | 0.67 | GFF2607 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 90 |
| Acidovorax sp. GW101-3H11 | 0.65 | Ac3H11_2295 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | 0.67 | Ac3H11_663 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 79 |
| Dechlorosoma suillum PS | 0.64 | Dsui_2708 | | succinyldiaminopimelate transaminase | 0.65 | Dsui_3212 | | acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II | low | > 51 |
| Paraburkholderia graminis OAS925 | 0.62 | ABIE53_002516 | | N-succinyldiaminopimelate aminotransferase | 0.74 | ABIE53_003625 | | long-chain acyl-CoA synthetase | low | > 113 |
| Variovorax sp. SCN45 | 0.61 | GFF254 | | N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17), type 2 | 0.68 | GFF7283 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 127 |
| Variovorax sp. OAS795 | 0.59 | ABID97_RS16630 | | succinyldiaminopimelate transaminase | 0.68 | ABID97_RS04445 | | long-chain-fatty-acid--CoA ligase | low | > 91 |
| Marinobacter adhaerens HP15 | 0.55 | HP15_1162 | | aminotransferase, class I and II | 0.53 | HP15_1864 | | acyl-CoA synthase | low | > 73 |
| Pseudomonas syringae pv. syringae B728a | 0.54 | Psyr_1340 | | Aminotransferase, class I and II | 0.50 | Psyr_3834 | | AMP-dependent synthetase and ligase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.54 | Psyr_1340 | | Aminotransferase, class I and II | 0.50 | Psyr_3834 | | AMP-dependent synthetase and ligase | low | > 86 |
| Pseudomonas putida KT2440 | 0.53 | PP_1588 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative | 0.52 | PP_4549 | | long-chain-fatty-acid/CoA ligase | low | > 96 |
| Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_3080 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | 0.44 | Pf1N1B4_575 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 87 |
| Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_06055 | | succinyldiaminopimelate transaminase | 0.51 | AO356_05105 | | long-chain fatty acid--CoA ligase | low | > 104 |
| Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_3073 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | 0.51 | Pf6N2E2_2872 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 103 |
| Pantoea sp. MT58 | 0.53 | IAI47_19335 | | succinyldiaminopimelate transaminase | 0.55 | IAI47_08835 | | long-chain-fatty-acid--CoA ligase FadD | low | > 76 |
| Pseudomonas sp. RS175 | 0.53 | PFR28_00393 | | LL-diaminopimelate aminotransferase | 0.51 | PFR28_00585 | | Long-chain-fatty-acid--CoA ligase | low | > 88 |
| Pseudomonas sp. S08-1 | 0.52 | OH686_06500 | | succinyldiaminopimelate transaminase | 0.53 | OH686_05750 | | Long-chain-fatty-acid--CoA ligase | low | > 80 |
| Pseudomonas stutzeri RCH2 | 0.52 | Psest_1470 | | succinyldiaminopimelate transaminase | 0.53 | Psest_1335 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) | low | > 67 |
| Pseudomonas fluorescens FW300-N2E3 | 0.52 | AO353_16445 | | succinyldiaminopimelate transaminase | 0.51 | AO353_03310 | | long-chain fatty acid--CoA ligase | low | > 101 |
| Pseudomonas fluorescens SBW25 | 0.52 | PFLU_RS06260 | | succinyldiaminopimelate transaminase | 0.52 | PFLU_RS17185 | | AMP-binding protein | low | > 109 |
| Pseudomonas fluorescens GW456-L13 | 0.52 | PfGW456L13_4713 | | N-succinyl-L,L-diaminopimelate aminotransferase alternative (EC 2.6.1.17) | 0.51 | PfGW456L13_1910 | | Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) | low | > 87 |
| Pseudomonas fluorescens SBW25-INTG | 0.52 | PFLU_RS06260 | | succinyldiaminopimelate transaminase | 0.52 | PFLU_RS17185 | | AMP-binding protein | low | > 109 |
| Pseudomonas simiae WCS417 | 0.52 | PS417_06195 | | succinyldiaminopimelate aminotransferase | 0.52 | PS417_15170 | | long-chain fatty acid--CoA ligase | low | > 88 |
| Acinetobacter radioresistens SK82 | 0.48 | MPMX26_01868 | | LL-diaminopimelate aminotransferase | 0.59 | MPMX26_00141 | | Long-chain-fatty-acid--CoA ligase | low | > 36 |
| Rhodospirillum rubrum S1H | 0.33 | Rru_A3706 | | Aminotransferase, class I and II (NCBI) | 0.28 | Rru_A1312 | | AMP-dependent synthetase and ligase (NCBI) | low | > 58 |
| Azospirillum brasilense Sp245 | 0.33 | AZOBR_RS02295 | | aspartate aminotransferase | 0.32 | AZOBR_RS31155 | | AMP-dependent synthetase | low | > 97 |
| Azospirillum sp. SherDot2 | 0.33 | MPMX19_05519 | | LL-diaminopimelate aminotransferase | 0.32 | MPMX19_02151 | | Long-chain-fatty-acid--CoA ligase | 0.73 | 7 |
| Dinoroseobacter shibae DFL-12 | 0.32 | Dshi_0060 | | aminotransferase class I and II (RefSeq) | 0.40 | Dshi_1000 | | AMP-dependent synthetase and ligase (RefSeq) | — | — |
| Phaeobacter inhibens DSM 17395 | 0.30 | PGA1_c33280 | | putative LL-diaminopimelate aminotransferase | 0.34 | PGA1_c25300 | | long-chain-fatty-acid--CoA ligase FadD | low | > 62 |
| Rhodopseudomonas palustris CGA009 | 0.28 | TX73_001450 | | aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme | 0.72 | TX73_022105 | | long-chain fatty acid--CoA ligase | low | > 86 |
Not shown: 2 genomes with orthologs for RR42_RS11930 only; 44 genomes with orthologs for RR42_RS18150 only