Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Cupriavidus basilensis FW507-4G11 | 1.0 | RR42_RS16925 | | histidine utilization repressor | 1.0 | RR42_RS07340 | | oligopeptidase A | 0.36 | 12 |
Acidovorax sp. GW101-3H11 | 0.69 | Ac3H11_2559 | | Histidine utilization repressor | 0.54 | Ac3H11_4097 | | Oligopeptidase A (EC 3.4.24.70) | low | > 79 |
Variovorax sp. OAS795 | 0.67 | ABID97_RS03415 | | histidine utilization repressor | 0.54 | ABID97_RS14080 | | M3 family metallopeptidase | low | > 91 |
Variovorax sp. SCN45 | 0.66 | GFF6410 | | Histidine utilization repressor | 0.54 | GFF963 | | Oligopeptidase A (EC 3.4.24.70) | low | > 127 |
Burkholderia phytofirmans PsJN | 0.53 | BPHYT_RS24030 | | histidine utilization repressor | 0.70 | BPHYT_RS12875 | | oligopeptidase A | — | — |
Paraburkholderia bryophila 376MFSha3.1 | 0.53 | H281DRAFT_05296 | | GntR family transcriptional regulator, histidine utilization repressor | 0.68 | H281DRAFT_00461 | | oligopeptidase A Metallo peptidase. MEROPS family M03A | low | > 103 |
Paraburkholderia sabiae LMG 24235 | 0.51 | QEN71_RS07755 | | histidine utilization repressor | 0.72 | QEN71_RS05695 | | M3 family metallopeptidase | low | > 153 |
Paraburkholderia graminis OAS925 | 0.51 | ABIE53_006530 | | GntR family histidine utilization transcriptional repressor | 0.70 | ABIE53_002798 | | oligopeptidase A | low | > 113 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.47 | Psyr_0366 | | transcriptional regulator, GntR family | 0.45 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.47 | Psyr_0366 | | transcriptional regulator, GntR family | 0.45 | Psyr_0045 | | oligopeptidase A, Metallo peptidase, MEROPS family M03A | low | > 86 |
Pseudomonas putida KT2440 | 0.45 | PP_5035 | | Histidine utilization repressor | 0.46 | PP_0096 | | oligopeptidase A | low | > 96 |
Pseudomonas fluorescens GW456-L13 | 0.45 | PfGW456L13_329 | | Histidine utilization repressor | 0.45 | PfGW456L13_624 | | Oligopeptidase A (EC 3.4.24.70) | low | > 87 |
Pseudomonas fluorescens FW300-N1B4 | 0.45 | Pf1N1B4_1590 | | Histidine utilization repressor | 0.46 | Pf1N1B4_1844 | | Oligopeptidase A (EC 3.4.24.70) | low | > 87 |
Pseudomonas fluorescens FW300-N2E3 | 0.44 | AO353_12240 | | histidine utilization repressor | 0.45 | AO353_10775 | | oligopeptidase A | low | > 101 |
Pseudomonas fluorescens FW300-N2E2 | 0.44 | Pf6N2E2_3807 | | Histidine utilization repressor | 0.45 | Pf6N2E2_4091 | | Oligopeptidase A (EC 3.4.24.70) | low | > 103 |
Pseudomonas fluorescens FW300-N2C3 | 0.44 | AO356_09640 | | histidine utilization repressor | 0.45 | AO356_11120 | | oligopeptidase A | low | > 104 |
Pseudomonas fluorescens SBW25-INTG | 0.44 | PFLU_RS01765 | | histidine utilization repressor | 0.45 | PFLU_RS00240 | | oligopeptidase A | low | > 109 |
Pseudomonas fluorescens SBW25 | 0.44 | PFLU_RS01765 | | histidine utilization repressor | 0.45 | PFLU_RS00240 | | oligopeptidase A | low | > 109 |
Pseudomonas sp. RS175 | 0.44 | PFR28_04963 | | HTH-type transcriptional repressor NagR | 0.45 | PFR28_04699 | | Oligopeptidase A | low | > 88 |
Pseudomonas simiae WCS417 | 0.44 | PS417_01710 | | histidine utilization repressor | 0.45 | PS417_00245 | | oligopeptidase A | low | > 88 |
Klebsiella michiganensis M5al | 0.43 | BWI76_RS08730 | | histidine utilization repressor | 0.45 | BWI76_RS26610 | | oligopeptidase A | 0.16 | 52 |
Pantoea sp. MT58 | 0.43 | IAI47_13270 | | histidine utilization repressor | 0.45 | IAI47_01345 | | oligopeptidase A | low | > 76 |
Dickeya dadantii 3937 | 0.43 | DDA3937_RS15020 | | histidine utilization repressor | 0.44 | DDA3937_RS21265 | | oligopeptidase A | low | > 74 |
Enterobacter asburiae PDN3 | 0.43 | EX28DRAFT_2221 | | histidine utilization repressor, proteobacterial | 0.45 | EX28DRAFT_4063 | | Zn-dependent oligopeptidases | low | > 76 |
Dickeya dianthicola ME23 | 0.42 | DZA65_RS15850 | | histidine utilization repressor | 0.45 | DZA65_RS00035 | | oligopeptidase A | low | > 75 |
Enterobacter sp. TBS_079 | 0.41 | MPMX20_01398 | | HTH-type transcriptional repressor NagR | 0.45 | MPMX20_04397 | | Oligopeptidase A | low | > 85 |
Dickeya dianthicola 67-19 | 0.41 | HGI48_RS15100 | | histidine utilization repressor | 0.45 | HGI48_RS00045 | | oligopeptidase A | low | > 71 |
Rhizobium sp. OAE497 | 0.41 | ABIE40_RS23900 | | histidine utilization repressor | 0.24 | ABIE40_RS18135 | | M3 family metallopeptidase | low | > 107 |
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.41 | GFF665 | | Histidine utilization repressor | 0.45 | GFF517 | | Oligopeptidase A (EC 3.4.24.70) | low | > 78 |
Serratia liquefaciens MT49 | 0.41 | IAI46_10615 | | histidine utilization repressor | 0.44 | IAI46_24210 | | oligopeptidase A | low | > 86 |
Rahnella sp. WP5 | 0.41 | EX31_RS06725 | | histidine utilization repressor | 0.45 | EX31_RS05165 | | oligopeptidase A | low | > 89 |
Shewanella oneidensis MR-1 | 0.40 | SO0096 | hutC | histidine utilization repressor (NCBI ptt file) | 0.45 | SO4699 | prlC | oligopeptidase A (NCBI ptt file) | low | > 76 |
Pseudomonas sp. S08-1 | 0.40 | OH686_16760 | | histidine utilization repressor | 0.45 | OH686_12360 | | Oligopeptidase A | low | > 80 |
Shewanella sp. ANA-3 | 0.40 | Shewana3_0099 | | histidine utilization repressor (RefSeq) | 0.45 | Shewana3_4051 | | oligopeptidase A (RefSeq) | low | > 73 |
Shewanella amazonensis SB2B | 0.39 | Sama_0081 | | histidine utilization repressor (RefSeq) | 0.46 | Sama_3546 | | oligopeptidase A (RefSeq) | low | > 62 |
Shewanella loihica PV-4 | 0.38 | Shew_3758 | | histidine utilization repressor (RefSeq) | 0.46 | Shew_3657 | | oligopeptidase A (RefSeq) | low | > 60 |
Vibrio cholerae E7946 ATCC 55056 | 0.35 | CSW01_06100 | | histidine utilization repressor | 0.46 | CSW01_01010 | | oligopeptidase A | low | > 62 |
Kangiella aquimarina DSM 16071 | 0.33 | B158DRAFT_1434 | | histidine utilization repressor, proteobacterial | 0.43 | B158DRAFT_0457 | | Zn-dependent oligopeptidases | low | > 40 |
Bosea sp. OAE506 | 0.29 | ABIE41_RS23630 | | histidine utilization repressor | 0.23 | ABIE41_RS12985 | | M3 family metallopeptidase | 0.21 | 50 |
Brevundimonas sp. GW460-12-10-14-LB2 | 0.27 | A4249_RS06610 | | histidine utilization repressor | 0.20 | A4249_RS12525 | | M3 family metallopeptidase | 0.48 | 22 |
Xanthomonas campestris pv. campestris strain 8004 | 0.26 | Xcc-8004.3293.1 | | Histidine utilization repressor | 0.54 | Xcc-8004.4539.1 | | Oligopeptidase A (EC 3.4.24.70) | low | > 74 |
Caulobacter crescentus NA1000 Δfur | 0.26 | CCNA_01013 | | histidine utilization repressor | 0.18 | CCNA_03816 | | peptidyl-dipeptidase DCP | low | > 67 |
Caulobacter crescentus NA1000 | 0.26 | CCNA_01013 | | histidine utilization repressor | 0.18 | CCNA_03816 | | peptidyl-dipeptidase DCP | low | > 66 |
Phaeobacter inhibens DSM 17395 | 0.24 | PGA1_c36370 | | HTH-type transcriptional regulator, GntR family | 0.23 | PGA1_c26590 | | peptidyl-dipeptidase Dcp | low | > 62 |
Sphingomonas koreensis DSMZ 15582 | 0.23 | Ga0059261_3966 | | Transcriptional regulators | 0.21 | Ga0059261_2479 | | Zn-dependent oligopeptidases | low | > 68 |
Not shown: 2 genomes with orthologs for RR42_RS16925 only; 47 genomes with orthologs for RR42_RS07340 only