Conservation of cofitness between RR42_RS16925 and RR42_RS07340 in Cupriavidus basilensis FW507-4G11

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS16925 histidine utilization repressor 1.0 RR42_RS07340 oligopeptidase A 0.36 12
Acidovorax sp. GW101-3H11 0.69 Ac3H11_2559 Histidine utilization repressor 0.54 Ac3H11_4097 Oligopeptidase A (EC 3.4.24.70) low > 79
Variovorax sp. OAS795 0.67 ABID97_RS03415 histidine utilization repressor 0.54 ABID97_RS14080 M3 family metallopeptidase low > 91
Variovorax sp. SCN45 0.66 GFF6410 Histidine utilization repressor 0.54 GFF963 Oligopeptidase A (EC 3.4.24.70) low > 127
Burkholderia phytofirmans PsJN 0.53 BPHYT_RS24030 histidine utilization repressor 0.70 BPHYT_RS12875 oligopeptidase A
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_05296 GntR family transcriptional regulator, histidine utilization repressor 0.68 H281DRAFT_00461 oligopeptidase A Metallo peptidase. MEROPS family M03A low > 103
Paraburkholderia sabiae LMG 24235 0.51 QEN71_RS07755 histidine utilization repressor 0.72 QEN71_RS05695 M3 family metallopeptidase low > 153
Paraburkholderia graminis OAS925 0.51 ABIE53_006530 GntR family histidine utilization transcriptional repressor 0.70 ABIE53_002798 oligopeptidase A low > 113
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_0366 transcriptional regulator, GntR family 0.45 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_0366 transcriptional regulator, GntR family 0.45 Psyr_0045 oligopeptidase A, Metallo peptidase, MEROPS family M03A low > 86
Pseudomonas putida KT2440 0.45 PP_5035 Histidine utilization repressor 0.46 PP_0096 oligopeptidase A low > 96
Pseudomonas fluorescens GW456-L13 0.45 PfGW456L13_329 Histidine utilization repressor 0.45 PfGW456L13_624 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens FW300-N1B4 0.45 Pf1N1B4_1590 Histidine utilization repressor 0.46 Pf1N1B4_1844 Oligopeptidase A (EC 3.4.24.70) low > 87
Pseudomonas fluorescens FW300-N2E3 0.44 AO353_12240 histidine utilization repressor 0.45 AO353_10775 oligopeptidase A low > 101
Pseudomonas fluorescens FW300-N2E2 0.44 Pf6N2E2_3807 Histidine utilization repressor 0.45 Pf6N2E2_4091 Oligopeptidase A (EC 3.4.24.70) low > 103
Pseudomonas fluorescens FW300-N2C3 0.44 AO356_09640 histidine utilization repressor 0.45 AO356_11120 oligopeptidase A low > 104
Pseudomonas fluorescens SBW25-INTG 0.44 PFLU_RS01765 histidine utilization repressor 0.45 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas fluorescens SBW25 0.44 PFLU_RS01765 histidine utilization repressor 0.45 PFLU_RS00240 oligopeptidase A low > 109
Pseudomonas sp. RS175 0.44 PFR28_04963 HTH-type transcriptional repressor NagR 0.45 PFR28_04699 Oligopeptidase A low > 88
Pseudomonas simiae WCS417 0.44 PS417_01710 histidine utilization repressor 0.45 PS417_00245 oligopeptidase A low > 88
Klebsiella michiganensis M5al 0.43 BWI76_RS08730 histidine utilization repressor 0.45 BWI76_RS26610 oligopeptidase A 0.16 52
Pantoea sp. MT58 0.43 IAI47_13270 histidine utilization repressor 0.45 IAI47_01345 oligopeptidase A low > 76
Dickeya dadantii 3937 0.43 DDA3937_RS15020 histidine utilization repressor 0.44 DDA3937_RS21265 oligopeptidase A low > 74
Enterobacter asburiae PDN3 0.43 EX28DRAFT_2221 histidine utilization repressor, proteobacterial 0.45 EX28DRAFT_4063 Zn-dependent oligopeptidases low > 76
Dickeya dianthicola ME23 0.42 DZA65_RS15850 histidine utilization repressor 0.45 DZA65_RS00035 oligopeptidase A low > 75
Enterobacter sp. TBS_079 0.41 MPMX20_01398 HTH-type transcriptional repressor NagR 0.45 MPMX20_04397 Oligopeptidase A low > 85
Dickeya dianthicola 67-19 0.41 HGI48_RS15100 histidine utilization repressor 0.45 HGI48_RS00045 oligopeptidase A low > 71
Rhizobium sp. OAE497 0.41 ABIE40_RS23900 histidine utilization repressor 0.24 ABIE40_RS18135 M3 family metallopeptidase low > 107
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.41 GFF665 Histidine utilization repressor 0.45 GFF517 Oligopeptidase A (EC 3.4.24.70) low > 78
Serratia liquefaciens MT49 0.41 IAI46_10615 histidine utilization repressor 0.44 IAI46_24210 oligopeptidase A low > 86
Rahnella sp. WP5 0.41 EX31_RS06725 histidine utilization repressor 0.45 EX31_RS05165 oligopeptidase A low > 89
Shewanella oneidensis MR-1 0.40 SO0096 hutC histidine utilization repressor (NCBI ptt file) 0.45 SO4699 prlC oligopeptidase A (NCBI ptt file) low > 76
Pseudomonas sp. S08-1 0.40 OH686_16760 histidine utilization repressor 0.45 OH686_12360 Oligopeptidase A low > 80
Shewanella sp. ANA-3 0.40 Shewana3_0099 histidine utilization repressor (RefSeq) 0.45 Shewana3_4051 oligopeptidase A (RefSeq) low > 73
Shewanella amazonensis SB2B 0.39 Sama_0081 histidine utilization repressor (RefSeq) 0.46 Sama_3546 oligopeptidase A (RefSeq) low > 62
Shewanella loihica PV-4 0.38 Shew_3758 histidine utilization repressor (RefSeq) 0.46 Shew_3657 oligopeptidase A (RefSeq) low > 60
Vibrio cholerae E7946 ATCC 55056 0.35 CSW01_06100 histidine utilization repressor 0.46 CSW01_01010 oligopeptidase A low > 62
Kangiella aquimarina DSM 16071 0.33 B158DRAFT_1434 histidine utilization repressor, proteobacterial 0.43 B158DRAFT_0457 Zn-dependent oligopeptidases low > 40
Bosea sp. OAE506 0.29 ABIE41_RS23630 histidine utilization repressor 0.23 ABIE41_RS12985 M3 family metallopeptidase 0.21 50
Brevundimonas sp. GW460-12-10-14-LB2 0.27 A4249_RS06610 histidine utilization repressor 0.20 A4249_RS12525 M3 family metallopeptidase 0.48 22
Xanthomonas campestris pv. campestris strain 8004 0.26 Xcc-8004.3293.1 Histidine utilization repressor 0.54 Xcc-8004.4539.1 Oligopeptidase A (EC 3.4.24.70) low > 74
Caulobacter crescentus NA1000 Δfur 0.26 CCNA_01013 histidine utilization repressor 0.18 CCNA_03816 peptidyl-dipeptidase DCP low > 67
Caulobacter crescentus NA1000 0.26 CCNA_01013 histidine utilization repressor 0.18 CCNA_03816 peptidyl-dipeptidase DCP low > 66
Phaeobacter inhibens DSM 17395 0.24 PGA1_c36370 HTH-type transcriptional regulator, GntR family 0.23 PGA1_c26590 peptidyl-dipeptidase Dcp low > 62
Sphingomonas koreensis DSMZ 15582 0.23 Ga0059261_3966 Transcriptional regulators 0.21 Ga0059261_2479 Zn-dependent oligopeptidases low > 68

Not shown: 2 genomes with orthologs for RR42_RS16925 only; 47 genomes with orthologs for RR42_RS07340 only