Conservation of cofitness between RR42_RS07325 and RR42_RS05255 in Cupriavidus basilensis FW507-4G11

46 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS07325 exodeoxyribonuclease III 1.0 RR42_RS05255 allantoinase 0.63 6
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS13495 exodeoxyribonuclease III 0.86 ABZR87_RS15095 allantoinase PuuE 0.49 46
Ralstonia solanacearum GMI1000 0.74 RS_RS08025 exodeoxyribonuclease III 0.85 RS_RS10635 allantoinase PuuE low > 80
Ralstonia solanacearum UW163 0.74 UW163_RS15010 exodeoxyribonuclease III 0.85 UW163_RS10480 allantoinase PuuE — —
Ralstonia solanacearum IBSBF1503 0.74 RALBFv3_RS01700 exodeoxyribonuclease III 0.85 RALBFv3_RS03245 allantoinase PuuE low > 76
Ralstonia solanacearum PSI07 0.73 RPSI07_RS15785 exodeoxyribonuclease III 0.85 RPSI07_RS14065 allantoinase PuuE low > 81
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS12925 exodeoxyribonuclease III 0.76 BPHYT_RS11555 allantoinase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.66 H281DRAFT_00456 Exodeoxyribonuclease III 0.76 H281DRAFT_05158 putative urate catabolism protein low > 103
Paraburkholderia sabiae LMG 24235 0.66 QEN71_RS05680 exodeoxyribonuclease III 0.75 QEN71_RS07020 allantoinase PuuE low > 153
Herbaspirillum seropedicae SmR1 0.65 HSERO_RS15630 exodeoxyribonuclease III 0.80 HSERO_RS21280 allantoinase low > 78
Castellaniella sp019104865 MT123 0.59 ABCV34_RS03115 exodeoxyribonuclease III 0.73 ABCV34_RS06095 allantoinase PuuE low > 48
Acidovorax sp. GW101-3H11 0.57 Ac3H11_4433 Exodeoxyribonuclease III (EC 3.1.11.2) 0.74 Ac3H11_1095 Uricase (urate oxidase) (EC 1.7.3.3) — —
Variovorax sp. SCN45 0.57 GFF3064 Exodeoxyribonuclease III (EC 3.1.11.2) 0.76 GFF1815 Uricase (urate oxidase) (EC 1.7.3.3) low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.56 GFF5268 Exodeoxyribonuclease III (EC 3.1.11.2) 0.68 GFF3309 Uricase (urate oxidase) (EC 1.7.3.3) low > 90
Variovorax sp. OAS795 0.56 ABID97_RS09955 exodeoxyribonuclease III 0.76 ABID97_RS22210 allantoinase PuuE low > 91
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.5140.1 Exodeoxyribonuclease III (EC 3.1.11.2) 0.51 Xcc-8004.362.1 Uricase (urate oxidase) (EC 1.7.3.3) low > 74
Agrobacterium fabrum C58 0.39 Atu5048 exodeoxyribonuclease III 0.54 Atu2328 hypothetical protein low > 89
Rhizobium sp. OAE497 0.38 ABIE40_RS08420 exodeoxyribonuclease III 0.54 ABIE40_RS13840 allantoinase PuuE low > 107
Azospirillum brasilense Sp245 0.38 AZOBR_RS15540 exodeoxyribonuclease III 0.62 AZOBR_RS14190 chitin deacetylase low > 97
Azospirillum sp. SherDot2 0.37 MPMX19_04331 Exodeoxyribonuclease 0.62 MPMX19_04444 hypothetical protein low > 112
Sinorhizobium meliloti 1021 0.36 SMc02077 exodeoxyribonuclease III protein 0.55 SM_b20875 hypothetical protein 0.29 88
Caulobacter crescentus NA1000 Δfur 0.35 CCNA_02090 exodeoxyribonuclease III 0.58 CCNA_02688 PuuE-related allantoinase — —
Caulobacter crescentus NA1000 0.35 CCNA_02090 exodeoxyribonuclease III 0.58 CCNA_02688 PuuE-related allantoinase low > 66
Pseudomonas sp. RS175 0.34 PFR28_01207 Exodeoxyribonuclease III 0.65 PFR28_03143 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2237 Exodeoxyribonuclease III (EC 3.1.11.2) 0.64 Pf6N2E2_5805 Uricase (urate oxidase) (EC 1.7.3.3) low > 103
Pseudomonas stutzeri RCH2 0.34 Psest_1187 exodeoxyribonuclease III 0.64 Psest_1200 putative urate catabolism protein low > 67
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_01850 exodeoxyribonuclease III 0.65 AO356_19460 allantoinase (EC 3.5.2.5) (from data) low > 104
Pseudomonas fluorescens FW300-N1B4 0.33 Pf1N1B4_38 Exodeoxyribonuclease III (EC 3.1.11.2) 0.65 Pf1N1B4_3766 Uricase (urate oxidase) (EC 1.7.3.3) low > 87
Pseudomonas fluorescens GW456-L13 0.33 PfGW456L13_3967 Exodeoxyribonuclease III (EC 3.1.11.2) 0.65 PfGW456L13_4180 Uricase (urate oxidase) (EC 1.7.3.3) low > 87
Pseudomonas putida KT2440 0.32 PP_2707 putative Exodeoxyribonuclease III 0.67 PP_4286 allantoinase low > 96
Enterobacter sp. TBS_079 0.28 MPMX20_01864 Exodeoxyribonuclease III 0.66 MPMX20_01662 hypothetical protein low > 85
Klebsiella michiganensis M5al 0.27 BWI76_RS11665 exodeoxyribonuclease III 0.67 BWI76_RS10540 allantoinase low > 92
Enterobacter asburiae PDN3 0.27 EX28DRAFT_1753 exodeoxyribonuclease III 0.66 EX28DRAFT_1944 putative urate catabolism protein low > 76
Pectobacterium carotovorum WPP14 0.27 HER17_RS11085 exodeoxyribonuclease III 0.71 HER17_RS17765 allantoinase PuuE low > 75
Rahnella sp. WP5 0.26 EX31_RS06330 exodeoxyribonuclease III 0.70 EX31_RS21150 allantoinase PuuE low > 89
Pantoea sp. MT58 0.26 IAI47_08990 exodeoxyribonuclease III 0.71 IAI47_15300 allantoinase PuuE low > 76
Dickeya dadantii 3937 0.26 DDA3937_RS10310 exodeoxyribonuclease III 0.70 DDA3937_RS16690 allantoinase PuuE low > 74
Serratia liquefaciens MT49 0.26 IAI46_14290 exodeoxyribonuclease III 0.74 IAI46_04175 allantoinase PuuE low > 86
Dickeya dianthicola ME23 0.26 DZA65_RS10795 exodeoxyribonuclease III 0.70 DZA65_RS17850 allantoinase PuuE low > 75
Dickeya dianthicola 67-19 0.26 HGI48_RS10320 exodeoxyribonuclease III 0.70 HGI48_RS16775 allantoinase PuuE low > 71
Pseudomonas syringae pv. syringae B728a ΔmexB 0.25 Psyr_2476 Exodeoxyribonuclease III 0.66 Psyr_1809 Polysaccharide deacetylase 0.42 3
Pseudomonas syringae pv. syringae B728a 0.25 Psyr_2476 Exodeoxyribonuclease III 0.66 Psyr_1809 Polysaccharide deacetylase low > 86
Pseudomonas fluorescens FW300-N2E3 0.24 AO353_27875 exonuclease III 0.65 AO353_02320 allantoinase low > 101
Pseudomonas simiae WCS417 0.24 PS417_16980 exonuclease III 0.65 PS417_19415 allantoinase low > 88
Pseudomonas fluorescens SBW25 0.24 PFLU_RS18930 exodeoxyribonuclease III 0.65 PFLU_RS21385 allantoinase PuuE low > 109
Pseudomonas fluorescens SBW25-INTG 0.24 PFLU_RS18930 exodeoxyribonuclease III 0.65 PFLU_RS21385 allantoinase PuuE low > 109
Alteromonas macleodii MIT1002 0.22 MIT1002_01652 Exodeoxyribonuclease III 0.60 MIT1002_01577 putative urate catabolism protein low > 70

Not shown: 42 genomes with orthologs for RR42_RS07325 only; 0 genomes with orthologs for RR42_RS05255 only