Conservation of cofitness between RR42_RS18310 and RR42_RS04460 in Cupriavidus basilensis FW507-4G11

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS18310 indole-3-glycerol-phosphate synthase 1.0 RR42_RS04460 chorismate mutase 0.34 5
Ralstonia sp. UNC404CL21Col 0.74 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.72 ABZR87_RS09450 prephenate dehydratase 0.79 19
Ralstonia solanacearum GMI1000 0.72 RS_RS14450 Indole-3-glycerol phosphate synthase 1 0.71 RS_RS04495 prephenate dehydratase — —
Ralstonia solanacearum UW163 0.71 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC 0.72 UW163_RS16050 chorismate mutase — —
Ralstonia solanacearum IBSBF1503 0.71 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC 0.72 RALBFv3_RS13760 chorismate mutase — —
Ralstonia solanacearum PSI07 0.70 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC 0.72 RPSI07_RS19710 prephenate dehydratase — —
Herbaspirillum seropedicae SmR1 0.69 HSERO_RS19450 indole-3-glycerol-phosphate synthase 0.61 HSERO_RS18430 chorismate mutase 0.89 12
Hydrogenophaga sp. GW460-11-11-14-LB1 0.61 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.51 GFF5343 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.92 8
Acidovorax sp. GW101-3H11 0.60 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.51 Ac3H11_2574 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.92 15
Paraburkholderia sabiae LMG 24235 0.60 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC 0.58 QEN71_RS04070 prephenate dehydratase 0.88 20
Variovorax sp. SCN45 0.59 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.51 GFF6182 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Variovorax sp. OAS795 0.59 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC 0.51 ABID97_RS09515 prephenate dehydratase — —
Dechlorosoma suillum PS 0.58 Dsui_0168 Indole-3-glycerol phosphate synthase 0.47 Dsui_1940 chorismate mutase, clade 2 — —
Pseudomonas sp. S08-1 0.58 OH686_15140 Indole-3-glycerol phosphate synthase 0.44 OH686_20870 Chorismate mutase I / Prephenate dehydratase 0.64 42
Castellaniella sp019104865 MT123 0.57 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC 0.52 ABCV34_RS07110 prephenate dehydratase — —
Pseudomonas simiae WCS417 0.57 PS417_25710 indole-3-glycerol-phosphate synthase 0.45 PS417_08125 prephenate dehydratase 0.44 74
Paraburkholderia bryophila 376MFSha3.1 0.57 H281DRAFT_05712 indole-3-glycerol phosphate synthase 0.59 H281DRAFT_03925 chorismate mutase 0.67 13
Pseudomonas fluorescens SBW25 0.56 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.45 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens SBW25-INTG 0.56 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.45 PFLU_RS08095 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E2 0.56 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.44 Pf6N2E2_2520 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.56 Psyr_4579 indole-3-glycerol phosphate synthase 0.45 Psyr_3645 prephenate dehydratase — —
Pseudomonas syringae pv. syringae B728a 0.56 Psyr_4579 indole-3-glycerol phosphate synthase 0.45 Psyr_3645 prephenate dehydratase — —
Pseudomonas fluorescens GW456-L13 0.56 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.44 PfGW456L13_2176 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.72 50
Pseudomonas fluorescens FW300-N1B4 0.55 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.44 Pf1N1B4_350 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.80 33
Pseudomonas sp. RS175 0.55 PFR28_04043 Indole-3-glycerol phosphate synthase 0.45 PFR28_00907 Bifunctional chorismate mutase/prephenate dehydratase — —
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS17405 indole-3-glycerol phosphate synthase 0.59 BPHYT_RS14910 chorismate mutase 0.81 22
Pseudomonas stutzeri RCH2 0.55 Psest_3647 Indole-3-glycerol phosphate synthase 0.43 Psest_1984 chorismate mutase domain of proteobacterial P-protein, clade 2 — —
Lysobacter sp. OAE881 0.55 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC 0.42 ABIE51_RS12145 prephenate dehydratase 0.77 11
Paraburkholderia graminis OAS925 0.55 ABIE53_003643 indole-3-glycerol phosphate synthase 0.59 ABIE53_003157 chorismate mutase/prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2C3 0.55 AO356_14440 indole-3-glycerol-phosphate synthase 0.44 AO356_03465 prephenate dehydratase — —
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_07210 indole-3-glycerol-phosphate synthase 0.44 AO353_02070 prephenate dehydratase 0.76 38
Pseudomonas putida KT2440 0.54 PP_0422 Indole-3-glycerol phosphate synthase 0.45 PP_1769 chorismate mutase/Prephenate dehydratase — —
Marinobacter adhaerens HP15 0.53 HP15_3291 indole-3-glycerol phosphate synthase 0.43 HP15_1362 chorismate mutase / prephenate dehydratase — —
Dyella japonica UNC79MFTsu3.2 0.52 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.42 ABZR86_RS02225 prephenate dehydratase 0.93 25
Rhodanobacter sp. FW510-T8 0.51 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC 0.41 OKGIIK_06915 pheA prephenate dehydratase low > 52
Xanthomonas campestris pv. campestris strain 8004 0.51 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.42 Xcc-8004.3282.1 Chorismate mutase I (EC 5.4.99.5) / Prephenate dehydratase (EC 4.2.1.51) 0.82 25
Rhodanobacter denitrificans MT42 0.49 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC 0.43 LRK55_RS00135 prephenate dehydratase low > 63
Rhodanobacter denitrificans FW104-10B01 0.49 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC 0.43 LRK54_RS00395 prephenate dehydratase 0.51 23
Acinetobacter radioresistens SK82 0.44 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.41 MPMX26_02021 Bifunctional chorismate mutase/prephenate dehydratase low > 36

Not shown: 26 genomes with orthologs for RR42_RS18310 only; 30 genomes with orthologs for RR42_RS04460 only