Conservation of cofitness between RR42_RS02130 and RR42_RS04355 in Cupriavidus basilensis FW507-4G11

60 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS02130 membrane protein 1.0 RR42_RS04355 recombination factor protein RarA 0.45 10
Ralstonia solanacearum PSI07 0.66 RPSI07_RS22075 Na/Pi cotransporter family protein 0.83 RPSI07_RS13205 replication-associated recombination protein A low > 81
Ralstonia solanacearum UW163 0.65 UW163_RS02355 Na/Pi cotransporter family protein 0.83 UW163_RS09525 replication-associated recombination protein A — —
Ralstonia solanacearum IBSBF1503 0.65 RALBFv3_RS11225 Na/Pi cotransporter family protein 0.83 RALBFv3_RS04145 replication-associated recombination protein A low > 76
Ralstonia sp. UNC404CL21Col 0.65 ABZR87_RS07115 Na/Pi cotransporter family protein 0.82 ABZR87_RS16030 replication-associated recombination protein A low > 80
Pseudomonas fluorescens FW300-N2E3 0.52 AO353_11030 hypothetical protein 0.56 AO353_27640 recombination factor protein RarA low > 101
Serratia liquefaciens MT49 0.51 IAI46_23120 Na/Pi cotransporter family protein 0.49 IAI46_08570 replication-associated recombination protein A low > 86
Pseudomonas fluorescens SBW25 0.51 PFLU_RS00500 Na/Pi cotransporter family protein 0.56 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens SBW25-INTG 0.51 PFLU_RS00500 Na/Pi cotransporter family protein 0.56 PFLU_RS18520 replication-associated recombination protein A low > 109
Pseudomonas fluorescens GW456-L13 0.51 PfGW456L13_633 Sodium-dependent phosphate transporter 0.57 PfGW456L13_2653 FIG065221: Holliday junction DNA helicase low > 87
Paraburkholderia bryophila 376MFSha3.1 0.50 H281DRAFT_02046 phosphate:Na+ symporter 0.76 H281DRAFT_00180 Recombination protein MgsA low > 103
Pseudomonas sp. RS175 0.50 PFR28_04646 hypothetical protein 0.57 PFR28_02606 Replication-associated recombination protein A low > 88
Pseudomonas fluorescens FW300-N2E2 0.50 Pf6N2E2_4140 Sodium-dependent phosphate transporter 0.56 Pf6N2E2_299 FIG065221: Holliday junction DNA helicase low > 103
Paraburkholderia sabiae LMG 24235 0.50 QEN71_RS01330 Na/Pi cotransporter family protein 0.76 QEN71_RS03415 replication-associated recombination protein A low > 153
Pseudomonas fluorescens FW300-N1B4 0.50 Pf1N1B4_1896 Sodium-dependent phosphate transporter 0.57 Pf1N1B4_4062 FIG065221: Holliday junction DNA helicase low > 87
Pseudomonas fluorescens FW300-N2C3 0.50 AO356_11360 hypothetical protein 0.56 AO356_22185 recombination factor protein RarA low > 104
Pseudomonas putida KT2440 0.50 PP_0145 Na+/Pi-cotransporter 0.57 PP_4002 DNA-dependent ATPase required for recombination low > 96
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS02475 membrane protein 0.78 BPHYT_RS05100 ATPase AAA low > 109
Pseudomonas simiae WCS417 0.49 PS417_00510 membrane protein 0.56 PS417_16480 recombination factor protein RarA low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.49 Psyr_0069 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein 0.57 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas syringae pv. syringae B728a 0.49 Psyr_0069 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein 0.57 Psyr_3177 Recombination protein MgsA low > 86
Pseudomonas stutzeri RCH2 0.49 Psest_0210 Na/Pi-cotransporter 0.58 Psest_2034 ATPase related to the helicase subunit of the Holliday junction resolvase low > 67
Pectobacterium carotovorum WPP14 0.48 HER17_RS02330 Na/Pi cotransporter family protein 0.49 HER17_RS12345 replication-associated recombination protein A low > 75
Acidovorax sp. GW101-3H11 0.48 Ac3H11_1718 Sodium-dependent phosphate transporter 0.62 Ac3H11_1696 FIG065221: Holliday junction DNA helicase low > 79
Rahnella sp. WP5 0.46 EX31_RS11800 Na/Pi cotransporter family protein 0.49 EX31_RS18515 replication-associated recombination protein A low > 89
Pantoea sp. MT58 0.46 IAI47_17950 Na/Pi cotransporter family protein 0.49 IAI47_12900 replication-associated recombination protein A low > 76
Variovorax sp. OAS795 0.46 ABID97_RS22650 Na/Pi cotransporter family protein 0.62 ABID97_RS07835 replication-associated recombination protein A low > 91
Variovorax sp. SCN45 0.46 GFF6062 Sodium-dependent phosphate transporter 0.62 GFF6034 Replication-associated recombination protein RarA low > 127
Klebsiella michiganensis M5al 0.45 BWI76_RS01690 membrane protein 0.51 BWI76_RS09670 recombination factor protein RarA low > 92
Pseudomonas sp. S08-1 0.44 OH686_12090 Sodium-dependent phosphate transporter 0.57 OH686_00270 Replication-associated recombination protein RarA low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 0.44 OHPLBJKB_04029 hypothetical protein 0.50 OHPLBJKB_02776 Replication-associated recombination protein A low > 73
Escherichia coli BL21 0.44 ECD_03892 putative Na+/Pi-cotransporter 0.50 ECD_00896 recombination intermediate processing DNA-dependent ATPase low > 61
Escherichia coli BW25113 0.44 b4020 yjbB predicted transporter (NCBI) 0.50 b0892 ycaJ recombination protein (NCBI) low > 76
Escherichia coli ECOR27 0.44 NOLOHH_05375 yjbB Uncharacterized protein YjbB 0.50 NOLOHH_22130 rarA replication-associated recombination protein RarA low > 75
Escherichia fergusonii Becca 0.44 EFB2_04589 hypothetical protein 0.50 EFB2_03169 Replication-associated recombination protein A low > 86
Escherichia coli Nissle 1917 0.44 ECOLIN_RS23175 Na/Pi cotransporter family protein 0.50 ECOLIN_RS04745 replication-associated recombination protein RarA low > 55
Escherichia coli ECRC62 0.44 BNILDI_06145 yjbB Uncharacterized protein YjbB 0.50 BNILDI_20385 rarA replication-associated recombination protein RarA low > 75
Enterobacter asburiae PDN3 0.44 EX28DRAFT_4325 Na/Pi-cotransporter 0.50 EX28DRAFT_2040 ATPase related to the helicase subunit of the Holliday junction resolvase low > 76
Escherichia coli ECOR38 0.44 HEPCGN_11870 yjbB Uncharacterized protein YjbB 0.50 HEPCGN_22950 rarA replication-associated recombination protein RarA low > 87
Enterobacter sp. TBS_079 0.44 MPMX20_00236 hypothetical protein 0.50 MPMX20_01554 Replication-associated recombination protein A low > 85
Escherichia coli ECRC100 0.44 OKFHMN_13235 yjbB Uncharacterized protein YjbB 0.50 OKFHMN_05560 rarA replication-associated recombination protein RarA low > 80
Erwinia tracheiphila SCR3 0.44 LU632_RS22385 Na/Pi cotransporter family protein 0.48 LU632_RS09755 replication-associated recombination protein A low > 74
Escherichia coli ECRC101 0.44 MCAODC_03735 yjbB Uncharacterized protein YjbB 0.50 MCAODC_24950 rarA replication-associated recombination protein RarA low > 87
Escherichia coli ECRC99 0.44 KEDOAH_14925 yjbB Uncharacterized protein YjbB 0.50 KEDOAH_22175 rarA replication-associated recombination protein RarA — —
Escherichia coli ECRC102 0.44 NIAGMN_10985 yjbB Uncharacterized protein YjbB 0.50 NIAGMN_03280 rarA replication-associated recombination protein RarA — —
Dickeya dadantii 3937 0.44 DDA3937_RS19030 Na/Pi cotransporter family protein 0.48 DDA3937_RS09605 replication-associated recombination protein A low > 74
Escherichia coli ECRC98 0.44 JDDGAC_16860 yjbB Uncharacterized protein YjbB 0.50 JDDGAC_09370 rarA replication-associated recombination protein RarA low > 86
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.44 GFF1359 Sodium-dependent phosphate transporter 0.50 GFF4896 FIG065221: Holliday junction DNA helicase low > 78
Dickeya dianthicola ME23 0.44 DZA65_RS20230 Na/Pi cotransporter family protein 0.48 DZA65_RS09930 replication-associated recombination protein A low > 75
Dickeya dianthicola 67-19 0.43 HGI48_RS19110 Na/Pi cotransporter family protein 0.48 HGI48_RS09620 replication-associated recombination protein A low > 71
Bosea sp. OAE506 0.38 ABIE41_RS02580 Na/Pi cotransporter family protein 0.41 ABIE41_RS14690 replication-associated recombination protein A low > 77
Azospirillum sp. SherDot2 0.35 MPMX19_01642 hypothetical protein 0.45 MPMX19_01528 Replication-associated recombination protein A low > 112
Sinorhizobium meliloti 1021 0.33 SMc00233 hypothetical protein 0.44 SMc01279 recombination factor protein RarA low > 103
Dyella japonica UNC79MFTsu3.2 0.33 ABZR86_RS12880 Na/Pi cotransporter family protein 0.50 ABZR86_RS01825 replication-associated recombination protein A — —
Rhodospirillum rubrum S1H 0.30 Rru_A1871 Na/Pi cotransporter II-related (NCBI) 0.43 Rru_A2660 AAA ATPase, central region (NCBI) low > 58
Rhizobium sp. OAE497 0.30 ABIE40_RS13215 Na/Pi cotransporter family protein 0.43 ABIE40_RS08045 replication-associated recombination protein A 0.21 80
Agrobacterium fabrum C58 0.29 Atu2245 Na+/Pi-cotransporter 0.42 Atu1914 ATPase, AAA family protein low > 89
Castellaniella sp019104865 MT123 0.25 ABCV34_RS02200 Na/Pi cotransporter family protein 0.66 ABCV34_RS07220 replication-associated recombination protein A low > 48
Phaeobacter inhibens DSM 17395 0.23 PGA1_c31330 putative Na+/Pi-cotransporter 0.47 PGA1_c01930 replication-associated recombination protein A low > 62
Fusobacterium nucleatum SB010 0.12 HUW76_02865 Na/Pi cotransporter family protein 0.28 HUW76_02735 replication-associated recombination protein A — —
Parabacteroides merdae CL09T00C40 0.11 HMPREF1078_RS05905 Na/Pi cotransporter family protein 0.40 HMPREF1078_RS15395 replication-associated recombination protein A low > 61

Not shown: 3 genomes with orthologs for RR42_RS02130 only; 38 genomes with orthologs for RR42_RS04355 only