Conservation of cofitness between RR42_RS06555 and RR42_RS01915 in Cupriavidus basilensis FW507-4G11

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Cupriavidus basilensis FW507-4G11 1.0 RR42_RS06555 3-oxoacid CoA-transferase (EC 2.8.3.5), subunit A (from data) 1.0 RR42_RS01915 cytochrome C oxidase subunit I 0.47 16
Ralstonia solanacearum GMI1000 0.90 RS_RS07905 CoA transferase subunit A 0.70 RS_RS01825 heme A synthase low > 80
Paraburkholderia sabiae LMG 24235 0.86 QEN71_RS05245 CoA transferase subunit A 0.57 QEN71_RS01540 COX15/CtaA family protein low > 153
Ralstonia solanacearum IBSBF1503 0.86 RALBFv3_RS01830 CoA transferase subunit A 0.71 RALBFv3_RS10985 heme A synthase low > 76
Ralstonia solanacearum UW163 0.86 UW163_RS15140 CoA transferase subunit A 0.71 UW163_RS02595 heme A synthase
Ralstonia solanacearum PSI07 0.85 RPSI07_RS15660 CoA transferase subunit A 0.73 RPSI07_RS22320 heme A synthase low > 81
Burkholderia phytofirmans PsJN 0.84 BPHYT_RS13675 succinyl-CoA:3-ketoacid-CoA transferase 0.55 BPHYT_RS02685 cytochrome C oxidase subunit I 0.28 94
Castellaniella sp019104865 MT123 0.82 ABCV34_RS00770 CoA transferase subunit A 0.41 ABCV34_RS13235 COX15/CtaA family protein low > 48
Lysobacter sp. OAE881 0.81 ABIE51_RS04380 CoA transferase subunit A 0.16 ABIE51_RS19170 COX15/CtaA family protein 0.89 20
Paraburkholderia bryophila 376MFSha3.1 0.81 H281DRAFT_04495 3-oxoacid CoA-transferase subunit A 0.54 H281DRAFT_01986 cytochrome c oxidase assembly protein subunit 15 0.30 84
Herbaspirillum seropedicae SmR1 0.80 HSERO_RS23190 succinyl-CoA:3-ketoacid-CoA transferase 0.59 HSERO_RS20750 cytochrome C oxidase subunit I
Paraburkholderia graminis OAS925 0.80 ABIE53_002909 3-oxoacid CoA-transferase subunit A 0.55 ABIE53_000682 cytochrome c oxidase assembly protein subunit 15 0.53 16
Ralstonia sp. UNC404CL21Col 0.80 ABZR87_RS13770 CoA transferase subunit A 0.71 ABZR87_RS06840 COX15/CtaA family protein 0.65 18
Acidovorax sp. GW101-3H11 0.79 Ac3H11_132 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.43 Ac3H11_3884 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 79
Xanthomonas campestris pv. campestris strain 8004 0.79 Xcc-8004.4478.1 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.25 Xcc-8004.4838.1 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 74
Pseudomonas stutzeri RCH2 0.78 Psest_1078 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) 0.23 Psest_4333 Uncharacterized protein required for cytochrome oxidase assembly low > 67
Variovorax sp. OAS795 0.78 ABID97_RS19440 CoA transferase subunit A 0.35 ABID97_RS23920 COX15/CtaA family protein 0.52 26
Variovorax sp. SCN45 0.76 GFF7371 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.36 GFF2306 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 127
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF5197 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.39 GFF697 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 90
Rhodopseudomonas palustris CGA009 0.73 TX73_021545 CoA transferase subunit A 0.08 TX73_014290 COX15/CtaA family protein low > 86
Bosea sp. OAE506 0.72 ABIE41_RS01850 CoA transferase subunit A 0.07 ABIE41_RS19275 COX15/CtaA family protein low > 77
Caulobacter crescentus NA1000 Δfur 0.70 CCNA_00206 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 0.08 CCNA_01438 heme O monooxygenase low > 67
Caulobacter crescentus NA1000 0.70 CCNA_00206 succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A 0.08 CCNA_01438 heme O monooxygenase low > 66
Brevundimonas sp. GW460-12-10-14-LB2 0.70 A4249_RS02960 CoA transferase subunit A 0.08 A4249_RS05940 COX15/CtaA family protein low > 48
Shewanella loihica PV-4 0.66 Shew_2575 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.28 Shew_0118 cytochrome oxidase assembly (RefSeq)
Pontibacter actiniarum KMM 6156, DSM 19842 0.65 CA264_04625 succinyl-CoA--3-ketoacid-CoA transferase 0.10 CA264_01320 heme A synthase
Shewanella oneidensis MR-1 0.64 SO1892 atoD acetate CoA-transferase, subunit A (NCBI ptt file) 0.25 SO4613 cytochrome oxidase assembly protein, putative (NCBI ptt file) low > 76
Shewanella amazonensis SB2B 0.64 Sama_0518 3-oxoacid CoA-transferase (RefSeq) 0.28 Sama_3490 cytochrome oxidase assembly (RefSeq) low > 62
Shewanella sp. ANA-3 0.63 Shewana3_1667 3-oxoacid CoA-transferase, A subunit (RefSeq) 0.22 Shewana3_3997 cytochrome oxidase assembly (RefSeq)
Echinicola vietnamensis KMM 6221, DSM 17526 0.63 Echvi_3272 3-oxoacid CoA-transferase, A subunit 0.10 Echvi_2104 Uncharacterized protein required for cytochrome oxidase assembly
Kangiella aquimarina DSM 16071 0.63 B158DRAFT_2505 3-oxoacid CoA-transferase, A subunit 0.28 B158DRAFT_0670 Uncharacterized protein required for cytochrome oxidase assembly low > 40
Alteromonas macleodii MIT1002 0.62 MIT1002_02001 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.25 MIT1002_04028 Cytochrome oxidase assembly protein low > 70
Pseudomonas fluorescens FW300-N1B4 0.60 Pf1N1B4_5833 Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit A (EC 2.8.3.5) 0.27 Pf1N1B4_1861 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 87
Pseudomonas putida KT2440 0.60 PP_3122 acetoacetyl CoA-transferase (subunit A) 0.25 PP_0109 conserved membrane protein of unknown function low > 96
Pseudomonas fluorescens FW300-N2C3 0.60 AO356_21650 succinyl-CoA--3-ketoacid-CoA transferase 0.26 AO356_11195 cytochrome B low > 104
Pseudomonas sp. RS175 0.60 PFR28_01325 putative succinyl-CoA:3-ketoacid coenzyme A transferase subunit A 0.25 PFR28_04684 Heme A synthase low > 88
Pseudomonas fluorescens FW300-N2E2 0.60 Pf6N2E2_2111 Dehydrocarnitine CoA-transferase and acetoacetate CoA-transferase, subunit A (from data) 0.26 Pf6N2E2_4105 Heme A synthase, cytochrome oxidase biogenesis protein Cox15-CtaA low > 103
Pseudomonas fluorescens FW300-N2E3 0.60 AO353_27935 succinyl-CoA--3-ketoacid-CoA transferase 0.28 AO353_10865 cytochrome B low > 101
Pseudomonas simiae WCS417 0.59 PS417_10525 succinyl-CoA:3-ketoacid-CoA transferase 0.26 PS417_00335 cytochrome B561
Pseudomonas fluorescens SBW25 0.59 PFLU_RS10585 CoA transferase subunit A 0.26 PFLU_RS00325 heme A synthase low > 109
Pseudomonas fluorescens SBW25-INTG 0.59 PFLU_RS10585 CoA transferase subunit A 0.26 PFLU_RS00325 heme A synthase low > 109

Not shown: 22 genomes with orthologs for RR42_RS06555 only; 10 genomes with orthologs for RR42_RS01915 only