Conservation of cofitness between Psyr_0069 and Psyr_3742 in Pseudomonas syringae pv. syringae B728a

65 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_0069 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein 1.0 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 0.44 5
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_0069 Na+/Pi-cotransporter:Na/Pi cotransporter II-related protein 1.00 Psyr_3742 FAD dependent oxidoreductase:Protein of unknown function DUF752 low > 86
Pseudomonas sp. SVBP6 0.84 COO64_RS02585 Na/Pi cotransporter family protein 0.71 COO64_RS06835 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 93
Pseudomonas fluorescens SBW25-INTG 0.82 PFLU_RS00500 Na/Pi cotransporter family protein 0.72 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas fluorescens FW300-N2E3 0.82 AO353_11030 hypothetical protein 0.75 AO353_02165 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 101
Pseudomonas fluorescens SBW25 0.82 PFLU_RS00500 Na/Pi cotransporter family protein 0.72 PFLU_RS21190 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 109
Pseudomonas sp. DMC3 0.82 GFF609 hypothetical protein 0.75 GFF4698 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 89
Pseudomonas putida KT2440 0.82 PP_0145 Na+/Pi-cotransporter 0.68 PP_1751 methyltransferase/FAD-dependent oxidoreductase low > 96
Pseudomonas fluorescens FW300-N1B4 0.80 Pf1N1B4_1896 Sodium-dependent phosphate transporter 0.74 Pf1N1B4_373 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 87
Pseudomonas orientalis W4I3 0.80 QF045_RS03460 Na/Pi cotransporter family protein 0.71 QF045_RS21225 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 93
Pseudomonas fluorescens FW300-N2C3 0.80 AO356_11360 hypothetical protein 0.74 AO356_03570 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 104
Pseudomonas fluorescens FW300-N2E2 0.80 Pf6N2E2_4140 Sodium-dependent phosphate transporter 0.75 Pf6N2E2_2541 5-methylaminomethyl-2-thiouridine-forming enzyme mnmC low > 103
Pseudomonas lactucae CFBP13502 0.80 GEMAOFIL_00305 hypothetical protein 0.73 GEMAOFIL_02096 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 96
Pseudomonas fluorescens GW456-L13 0.80 PfGW456L13_633 Sodium-dependent phosphate transporter 0.74 PfGW456L13_2155 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 87
Pseudomonas sp. RS175 0.80 PFR28_04646 hypothetical protein 0.73 PFR28_00884 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 88
Pseudomonas simiae WCS417 0.79 PS417_00510 membrane protein 0.73 PS417_19225 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 88
Pseudomonas segetis P6 0.79 ACVTMO_RS03045 Na/Pi cotransporter family protein 0.66 ACVTMO_RS14220 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Pseudomonas sp. BP01 0.78 JOY50_RS20995 Na/Pi cotransporter family protein 0.70 JOY50_RS16225 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 84
Pseudomonas stutzeri RCH2 0.68 Psest_0210 Na/Pi-cotransporter 0.62 Psest_1634 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 67
Pseudomonas aeruginosa PUPa3 0.66 DQ20_RS58100 sodium-dependent inorganic phosphate transporter 0.62 DQ20_RS41435 mnmC;go_function=tRNA bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 101
Pseudomonas aeruginosa PA14 0.66 IKLFDK_26045 Na+/Pi-cotransporter 0.62 IKLFDK_17740 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 98
Pseudomonas aeruginosa MRSN321 0.66 DY961_RS25660 sodium-dependent inorganic phosphate transporter 0.62 DY961_RS15640 mnmC;go_function=tRNA bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 100
Serratia liquefaciens MT49 0.62 IAI46_23120 Na/Pi cotransporter family protein 0.29 IAI46_18000 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Pseudomonas sp. S08-1 0.62 OH686_12090 Sodium-dependent phosphate transporter 0.68 OH686_20990 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 80
Erwinia amylovora T8 0.60 OLJFJH_03645 Na+/Pi-cotransporter 0.30 OLJFJH_11180 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 58
Pectobacterium carotovorum WPP14 0.60 HER17_RS02330 Na/Pi cotransporter family protein 0.28 HER17_RS06960 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Rahnella sp. WP5 0.60 EX31_RS11800 Na/Pi cotransporter family protein 0.30 EX31_RS19660 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 89
Klebsiella michiganensis M5al 0.60 BWI76_RS01690 membrane protein 0.30 BWI76_RS20410 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC 0.18 87
Pantoea sp. MT58 0.59 IAI47_17950 Na/Pi cotransporter family protein 0.32 IAI47_06175 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Pantoea agglomerans CFBP13505 P0401 0.59 PagCFBP13505_RS22260 Na/Pi cotransporter family protein 0.33 PagCFBP13505_RS00130 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Enterobacter asburiae PDN3 0.59 EX28DRAFT_4325 Na/Pi-cotransporter 0.31 EX28DRAFT_0280 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain low > 76
Escherichia coli Nissle 1917 0.59 ECOLIN_RS23175 Na/Pi cotransporter family protein 0.31 ECOLIN_RS13465 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 55
Escherichia fergusonii Becca 0.59 EFB2_04589 hypothetical protein 0.31 EFB2_01534 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 86
Escherichia coli BW25113 0.59 b4020 yjbB predicted transporter (NCBI) 0.32 b2324 b2324 putative peptidase (VIMSS) low > 76
Escherichia coli BL21 0.59 ECD_03892 putative Na+/Pi-cotransporter 0.32 ECD_02249 fused 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase and FAD-dependent demodification enzyme low > 61
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_04029 hypothetical protein 0.32 OHPLBJKB_01381 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 74
Escherichia coli ECOR27 0.58 NOLOHH_05375 yjbB Uncharacterized protein YjbB 0.32 NOLOHH_14275 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Escherichia coli ECRC101 0.58 MCAODC_03735 yjbB Uncharacterized protein YjbB 0.32 MCAODC_13680 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli ECRC100 0.58 OKFHMN_13235 yjbB Uncharacterized protein YjbB 0.32 OKFHMN_22640 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 79
Escherichia coli ECRC102 0.58 NIAGMN_10985 yjbB Uncharacterized protein YjbB 0.32 NIAGMN_20415 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Escherichia coli ECRC98 0.58 JDDGAC_16860 yjbB Uncharacterized protein YjbB 0.32 JDDGAC_26600 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 87
Escherichia coli ECOR38 0.58 HEPCGN_11870 yjbB Uncharacterized protein YjbB 0.32 HEPCGN_21845 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 88
Escherichia coli ECRC62 0.58 BNILDI_06145 yjbB Uncharacterized protein YjbB 0.32 BNILDI_13195 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Escherichia coli ECRC99 0.58 KEDOAH_14925 yjbB Uncharacterized protein YjbB 0.32 KEDOAH_05555 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF1359 Sodium-dependent phosphate transporter 0.31 GFF1945 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 78
Enterobacter sp. TBS_079 0.58 MPMX20_00236 hypothetical protein 0.30 MPMX20_03259 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 85
Erwinia tracheiphila SCR3 0.58 LU632_RS22385 Na/Pi cotransporter family protein 0.31 LU632_RS07800 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 73
Klebsiella pneumoniae MKP103 0.58 KDGMDA_10170 Na+/Pi-cotransporter 0.30 KDGMDA_27245 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 95
Erwinia tracheiphila HP pepo 2.2 0.58 IJEDHG_08520 Na+/Pi-cotransporter 0.31 IJEDHG_17850 mnmC bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 61
Dickeya dadantii 3937 0.57 DDA3937_RS19030 Na/Pi cotransporter family protein 0.29 DDA3937_RS14515 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 74
Dickeya dianthicola ME23 0.56 DZA65_RS20230 Na/Pi cotransporter family protein 0.29 DZA65_RS15420 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 75
Dickeya dianthicola 67-19 0.55 HGI48_RS19110 Na/Pi cotransporter family protein 0.29 HGI48_RS14485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 71
Paraburkholderia bryophila 376MFSha3.1 0.53 H281DRAFT_02046 phosphate:Na+ symporter 0.28 H281DRAFT_02360 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein low > 103
Burkholderia phytofirmans PsJN 0.52 BPHYT_RS02475 membrane protein 0.28 BPHYT_RS19575 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC low > 109
Paraburkholderia sabiae LMG 24235 0.52 QEN71_RS01330 Na/Pi cotransporter family protein 0.27 QEN71_RS29485 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 153
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS02130 membrane protein 0.20 RR42_RS09010 FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 128
Ralstonia solanacearum PSI07 0.49 RPSI07_RS22075 Na/Pi cotransporter family protein 0.26 RPSI07_RS16115 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 81
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS07115 Na/Pi cotransporter family protein 0.27 ABZR87_RS12805 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 80
Ralstonia solanacearum UW163 0.47 UW163_RS02355 Na/Pi cotransporter family protein 0.26 UW163_RS14670 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC — —
Ralstonia solanacearum IBSBF1503 0.47 RALBFv3_RS11225 Na/Pi cotransporter family protein 0.26 RALBFv3_RS01360 bifunctional tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD/FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 76
Acidovorax sp. GW101-3H11 0.43 Ac3H11_1718 Sodium-dependent phosphate transporter 0.18 Ac3H11_579 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 79
Variovorax sp. OAS795 0.43 ABID97_RS22650 Na/Pi cotransporter family protein 0.17 ABID97_RS15455 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 91
Variovorax sp. SCN45 0.43 GFF6062 Sodium-dependent phosphate transporter 0.15 GFF1245 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC 2.1.1.61) / FAD-dependent cmnm(5)s(2)U34 oxidoreductase low > 127
Castellaniella sp019104865 MT123 0.23 ABCV34_RS02200 Na/Pi cotransporter family protein 0.16 ABCV34_RS09580 FAD-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase MnmC low > 48
Marinobacter adhaerens HP15 0.10 HP15_2820 phosphate: Na+ symporter 0.31 HP15_1540 protein YfcK low > 73
Dechlorosoma suillum PS 0.07 Dsui_3373 Na+/phosphate symporter 0.27 Dsui_2868 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain protein low > 51

Not shown: 12 genomes with orthologs for Psyr_0069 only; 14 genomes with orthologs for Psyr_3742 only