Conservation of cofitness between Psyr_1574 and Psyr_3480 in Pseudomonas syringae pv. syringae B728a

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 1.0 Psyr_3480 Flagellar basal-body rod protein FlgC 0.32 14
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_1574 oligopeptidase B, Serine peptidase, MEROPS family S09A 1.00 Psyr_3480 Flagellar basal-body rod protein FlgC low > 86
Pseudomonas sp. RS175 0.81 PFR28_00723 Dipeptidyl aminopeptidase BI 0.85 PFR28_03253 Flagellar basal-body rod protein FlgC low > 88
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_3357 Protease II (EC 3.4.21.83) 0.84 Pf1N1B4_3473 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_04360 peptidase S9 0.85 AO356_18920 flagellar basal-body rod protein FlgC low > 104
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_2713 Protease II (EC 3.4.21.83) 0.85 Pf6N2E2_5695 Flagellar basal-body rod protein FlgC low > 103
Pseudomonas fluorescens FW300-N2E3 0.81 AO353_17950 peptidase S9 0.84 AO353_02855 flagellar basal-body rod protein FlgC low > 101
Pseudomonas simiae WCS417 0.80 PS417_07445 peptidase S9 0.84 PS417_21565 flagellar basal body rod protein FlgC low > 88
Pseudomonas fluorescens SBW25-INTG 0.79 PFLU_RS07530 S9 family peptidase 0.84 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas fluorescens SBW25 0.79 PFLU_RS07530 S9 family peptidase 0.84 PFLU_RS23175 flagellar basal body rod protein FlgC low > 109
Pseudomonas putida KT2440 0.79 PP_4583 putative Peptidase 0.84 PP_4390 flagellar basal-body rod protein FlgC low > 96
Pseudomonas fluorescens GW456-L13 0.79 PfGW456L13_4484 Protease II (EC 3.4.21.83) 0.83 PfGW456L13_2002 Flagellar basal-body rod protein FlgC low > 87
Pseudomonas stutzeri RCH2 0.74 Psest_2655 Protease II 0.71 Psest_2967 flagellar basal-body rod protein FlgC low > 67
Pseudomonas sp. S08-1 0.74 OH686_05270 Protease II 0.77 OH686_02970 flagellar basal-body rod protein FlgC low > 80
Serratia liquefaciens MT49 0.37 IAI46_09975 prolyl oligopeptidase family serine peptidase 0.45 IAI46_15955 flagellar basal body rod protein FlgC low > 86
Rahnella sp. WP5 0.37 EX31_RS24750 prolyl oligopeptidase family serine peptidase 0.43 EX31_RS11310 flagellar basal body rod protein FlgC low > 89
Enterobacter sp. TBS_079 0.35 MPMX20_02752 Protease 2 0.44 MPMX20_01753 Flagellar basal-body rod protein FlgC low > 85
Dickeya dadantii 3937 0.35 DDA3937_RS10150 prolyl oligopeptidase family serine peptidase 0.45 DDA3937_RS13475 flagellar basal body rod protein FlgC low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS10180 prolyl oligopeptidase family serine peptidase 0.45 HGI48_RS13520 flagellar basal body rod protein FlgC low > 71
Enterobacter asburiae PDN3 0.35 EX28DRAFT_0709 Protease II 0.43 EX28DRAFT_1858 flagellar basal-body rod protein FlgC low > 76
Pectobacterium carotovorum WPP14 0.35 HER17_RS11765 prolyl oligopeptidase family serine peptidase 0.45 HER17_RS08170 flagellar basal body rod protein FlgC low > 75
Dickeya dianthicola ME23 0.35 DZA65_RS10595 prolyl oligopeptidase family serine peptidase 0.45 DZA65_RS14005 flagellar basal body rod protein FlgC low > 75
Xanthomonas campestris pv. campestris strain 8004 0.34 Xcc-8004.842.1 Protease II (EC 3.4.21.83) 0.38 Xcc-8004.2779.1 Flagellar basal-body rod protein FlgC low > 74
Escherichia fergusonii Becca 0.34 EFB2_02099 Protease 2 0.43 EFB2_02900 Flagellar basal-body rod protein FlgC low > 86
Escherichia coli ECRC62 0.34 BNILDI_15685 ptrB oligopeptidase B 0.43 BNILDI_19360 flgC flagellar basal body rod protein FlgC low > 75
Escherichia coli ECOR27 0.34 NOLOHH_16890 ptrB oligopeptidase B 0.43 NOLOHH_21200 flgC flagellar basal body rod protein FlgC low > 75
Escherichia coli HS(pFamp)R (ATCC 700891) 0.34 OHPLBJKB_01886 Protease 2 0.43 OHPLBJKB_02591 Flagellar basal-body rod protein FlgC low > 73
Bosea sp. OAE506 0.34 ABIE41_RS22470 S9 family peptidase 0.28 ABIE41_RS05520 flagellar basal body rod protein FlgC low > 77
Escherichia coli ECOR38 0.34 HEPCGN_04780 ptrB oligopeptidase B 0.43 HEPCGN_23820 flgC flagellar basal body rod protein FlgC low > 87
Escherichia coli BL21 0.34 ECD_01816 protease II 0.43 ECD_01070 flagellar component of cell-proximal portion of basal-body rod — —
Pantoea sp. MT58 0.33 IAI47_08515 prolyl oligopeptidase family serine peptidase 0.43 IAI47_12160 flagellar basal body rod protein FlgC low > 76
Escherichia coli ECRC101 0.33 MCAODC_19025 ptrB oligopeptidase B 0.43 MCAODC_23030 flgC flagellar basal body rod protein FlgC low > 87
Escherichia coli BW25113 0.33 b1845 ptrB protease II (NCBI) 0.43 b1074 flgC flagellar basal-body rod protein C (NCBI) low > 76
Escherichia coli ECRC102 0.33 NIAGMN_01680 ptrB oligopeptidase B 0.43 NIAGMN_24160 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC98 0.33 JDDGAC_00955 ptrB oligopeptidase B 0.43 JDDGAC_07330 flgC flagellar basal body rod protein FlgC low > 86
Escherichia coli ECRC99 0.33 KEDOAH_01725 ptrB oligopeptidase B 0.43 KEDOAH_24085 flgC flagellar basal body rod protein FlgC — —
Escherichia coli ECRC100 0.33 OKFHMN_26380 ptrB oligopeptidase B 0.43 OKFHMN_03670 flgC flagellar basal body rod protein FlgC low > 80
Lysobacter sp. OAE881 0.33 ABIE51_RS03010 S9 family peptidase 0.40 ABIE51_RS16675 flagellar basal body rod protein FlgC low > 62
Sphingomonas koreensis DSMZ 15582 0.33 Ga0059261_1842 Protease II 0.33 Ga0059261_2090 flagellar basal-body rod protein FlgC low > 68
Shewanella amazonensis SB2B 0.33 Sama_0144 oligopeptidase B (RefSeq) 0.57 Sama_2317 flgC flagellar basal body rod protein FlgC (RefSeq) low > 62
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.33 GFF1624 Protease II (EC 3.4.21.83) 0.44 GFF3355 Flagellar basal-body rod protein FlgC low > 78
Rhizobium sp. OAE497 0.33 ABIE40_RS04845 S9 family peptidase 0.24 ABIE40_RS02975 flagellar basal body rod protein FlgC low > 107
Sinorhizobium meliloti 1021 0.32 SMc00114 protease II oligopeptidase B hydrolase serine protease 0.24 SMc03028 flagellar basal body rod protein FlgC low > 103
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_00985 protease II PtrB 0.28 CCNA_01005 flagellar basal-body rod protein flgC 0.61 54
Caulobacter crescentus NA1000 0.32 CCNA_00985 protease II PtrB 0.28 CCNA_01005 flagellar basal-body rod protein flgC low > 66
Agrobacterium fabrum C58 0.32 Atu0897 protease II 0.24 Atu0554 flagellar basal-body rod protein low > 89
Alteromonas macleodii MIT1002 0.32 MIT1002_02578 Protease 2 0.54 MIT1002_01040 Putative proximal rod protein low > 70
Shewanella sp. ANA-3 0.32 Shewana3_0135 oligopeptidase B (RefSeq) 0.54 Shewana3_1322 flgC flagellar basal body rod protein FlgC (RefSeq) low > 73
Shewanella oneidensis MR-1 0.32 SO0144 ptrB protease II (NCBI ptt file) 0.54 SO3249 flgC flagellar basal-body rod protein FlgC (NCBI ptt file) low > 76
Rhodopseudomonas palustris CGA009 0.31 TX73_008065 S9 family peptidase 0.26 TX73_020155 flagellar basal body rod protein FlgC low > 86
Shewanella loihica PV-4 0.31 Shew_0039 oligopeptidase B (RefSeq) 0.56 Shew_1346 flgC flagellar basal body rod protein FlgC (RefSeq) — —
Brevundimonas sp. GW460-12-10-14-LB2 0.31 A4249_RS06115 S9 family peptidase 0.26 A4249_RS16025 flagellar basal body rod protein FlgC low > 48
Vibrio cholerae E7946 ATCC 55056 0.20 CSW01_14340 S9 family peptidase 0.46 CSW01_11220 flagellar basal body rod protein FlgC low > 62
Dyella japonica UNC79MFTsu3.2 0.13 ABZR86_RS17900 prolyl oligopeptidase family serine peptidase 0.51 ABZR86_RS20080 flagellar basal body rod protein FlgC low > 74
Rhodanobacter denitrificans MT42 0.12 LRK55_RS07655 prolyl oligopeptidase family serine peptidase 0.50 LRK55_RS13150 flagellar basal body rod protein FlgC low > 63
Rhodanobacter denitrificans FW104-10B01 0.12 LRK54_RS07925 prolyl oligopeptidase family serine peptidase 0.50 LRK54_RS13410 flagellar basal body rod protein FlgC low > 59
Rhodanobacter sp. FW510-T8 0.12 OKGIIK_14405 Peptidase S9 0.50 OKGIIK_02655 flgC flagellar basal body rod protein FlgC low > 52
Variovorax sp. SCN45 0.11 GFF3777 Prolyl endopeptidase (EC 3.4.21.26) 0.47 GFF5716 Flagellar basal-body rod protein FlgC low > 127

Not shown: 7 genomes with orthologs for Psyr_1574 only; 26 genomes with orthologs for Psyr_3480 only