Conservation of cofitness between Psyr_2975 and Psyr_0278 in Pseudomonas syringae pv. syringae B728a

56 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas syringae pv. syringae B728a 1.0 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.0 Psyr_0278 ABC-3 0.35 9
Pseudomonas syringae pv. syringae B728a ΔmexB 1.00 Psyr_2975 Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 1.00 Psyr_0278 ABC-3 low > 86
Pseudomonas fluorescens SBW25-INTG 0.98 PFLU_RS14570 peroxiredoxin 0.82 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB low > 109
Pseudomonas simiae WCS417 0.98 PS417_14045 alkyl hydroperoxide reductase 0.82 PS417_00375 membrane protein low > 88
Pseudomonas fluorescens SBW25 0.98 PFLU_RS14570 peroxiredoxin 0.82 PFLU_RS00365 zinc ABC transporter permease subunit ZnuB low > 109
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_22805 alkyl hydroperoxide reductase 0.79 AO356_11495 hypothetical protein low > 104
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_447 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.79 Pf6N2E2_4168 Zinc ABC transporter, inner membrane permease protein ZnuB low > 103
Pseudomonas fluorescens FW300-N1B4 0.95 Pf1N1B4_5011 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.80 Pf1N1B4_1869 Zinc ABC transporter, inner membrane permease protein ZnuB
Pseudomonas sp. RS175 0.95 PFR28_02482 Alkyl hydroperoxide reductase C 0.82 PFR28_04618 High-affinity zinc uptake system membrane protein ZnuB low > 88
Pseudomonas fluorescens GW456-L13 0.95 PfGW456L13_2927 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.88 PfGW456L13_600 Zinc ABC transporter, inner membrane permease protein ZnuB low > 87
Pseudomonas fluorescens FW300-N2E3 0.94 AO353_26965 alkyl hydroperoxide reductase 0.85 AO353_10900 hypothetical protein low > 101
Pseudomonas putida KT2440 0.88 PP_2439 peroxiredoxin, alkylhydroperoxide reductase - small subunit 0.75 PP_0117 Zn(2+) ABC transporter - permease subunit low > 96
Azospirillum sp. SherDot2 0.87 MPMX19_05835 Alkyl hydroperoxide reductase C 0.55 MPMX19_05517 High-affinity zinc uptake system membrane protein ZnuB low > 112
Azospirillum brasilense Sp245 0.86 AZOBR_RS20510 alkyl hydroperoxide reductase subunit C 0.47 AZOBR_RS01595 zinc transporter low > 97
Acinetobacter radioresistens SK82 0.81 MPMX26_02009 Alkyl hydroperoxide reductase C 0.25 MPMX26_00093 High-affinity zinc uptake system membrane protein ZnuB low > 36
Paraburkholderia sabiae LMG 24235 0.79 QEN71_RS13380 alkyl hydroperoxide reductase subunit C 0.14 QEN71_RS02565 metal ABC transporter permease low > 153
Burkholderia phytofirmans PsJN 0.78 BPHYT_RS26845 alkyl hydroperoxide reductase subunit C 0.16 BPHYT_RS16140 ABC transporter permease
Paraburkholderia graminis OAS925 0.78 ABIE53_005904 peroxiredoxin 0.16 ABIE53_003400 zinc/manganese transport system permease protein low > 113
Paraburkholderia bryophila 376MFSha3.1 0.78 H281DRAFT_02890 peroxiredoxin (alkyl hydroperoxide reductase subunit C) 0.15 H281DRAFT_04164 zinc/manganese transport system permease protein low > 103
Pantoea sp. MT58 0.77 IAI47_06790 alkyl hydroperoxide reductase subunit C 0.53 IAI47_08455 zinc ABC transporter permease subunit ZnuB low > 76
Pectobacterium carotovorum WPP14 0.75 HER17_RS02545 alkyl hydroperoxide reductase subunit C 0.48 HER17_RS11815 zinc ABC transporter permease subunit ZnuB low > 75
Klebsiella michiganensis M5al 0.75 BWI76_RS07940 alkyl hydroperoxide reductase subunit C 0.54 BWI76_RS18140 zinc ABC transporter permease low > 92
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.75 GFF4513 Alkyl hydroperoxide reductase protein C (EC 1.6.4.-) 0.54 GFF1638 Zinc ABC transporter, inner membrane permease protein ZnuB low > 78
Escherichia coli BL21 0.75 ECD_00574 alkyl hydroperoxide reductase, C22 subunit 0.54 ECD_01830 zinc ABC transporter permease low > 61
Escherichia coli ECRC99 0.75 KEDOAH_20460 ahpC alkyl hydroperoxide reductase subunit C 0.54 KEDOAH_01810 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC102 0.75 NIAGMN_05565 ahpC alkyl hydroperoxide reductase subunit C 0.54 NIAGMN_01765 znuB zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC101 0.75 MCAODC_26725 ahpC alkyl hydroperoxide reductase subunit C 0.54 MCAODC_19110 znuB zinc ABC transporter permease subunit ZnuB low > 87
Escherichia coli ECOR38 0.75 HEPCGN_00770 ahpC alkyl hydroperoxide reductase subunit C 0.54 HEPCGN_04700 znuB zinc ABC transporter permease subunit ZnuB low > 87
Escherichia coli Nissle 1917 0.75 ECOLIN_RS03320 alkyl hydroperoxide reductase subunit C 0.54 ECOLIN_RS10355 zinc ABC transporter permease subunit ZnuB
Escherichia coli ECRC98 0.75 JDDGAC_11155 ahpC alkyl hydroperoxide reductase subunit C 0.54 JDDGAC_00870 znuB zinc ABC transporter permease subunit ZnuB low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 0.75 OHPLBJKB_03100 Alkyl hydroperoxide reductase C 0.54 OHPLBJKB_01869 High-affinity zinc uptake system membrane protein ZnuB low > 73
Escherichia coli ECRC62 0.75 BNILDI_21895 ahpC alkyl hydroperoxide reductase subunit C 0.54 BNILDI_15525 znuB zinc ABC transporter permease subunit ZnuB low > 75
Escherichia coli ECRC100 0.75 OKFHMN_07510 ahpC alkyl hydroperoxide reductase subunit C 0.54 OKFHMN_26295 znuB zinc ABC transporter permease subunit ZnuB low > 80
Escherichia fergusonii Becca 0.75 EFB2_03486 Alkyl hydroperoxide reductase C 0.54 EFB2_02083 High-affinity zinc uptake system membrane protein ZnuB low > 86
Escherichia coli BW25113 0.75 b0605 ahpC alkyl hydroperoxide reductase, C22 subunit (NCBI) 0.54 b1859 znuB high-affinity zinc transporter membrane component (NCBI) low > 76
Escherichia coli ECOR27 0.75 NOLOHH_23885 ahpC alkyl hydroperoxide reductase subunit C 0.54 NOLOHH_16735 znuB zinc ABC transporter permease subunit ZnuB low > 75
Enterobacter asburiae PDN3 0.74 EX28DRAFT_2350 peroxiredoxin 0.55 EX28DRAFT_0697 ABC-type Mn2+/Zn2+ transport systems, permease components low > 76
Dickeya dadantii 3937 0.74 DDA3937_RS02515 alkyl hydroperoxide reductase subunit C 0.49 DDA3937_RS10090 zinc ABC transporter permease subunit ZnuB low > 74
Enterobacter sp. TBS_079 0.74 MPMX20_01271 Alkyl hydroperoxide reductase C 0.56 MPMX20_02765 High-affinity zinc uptake system membrane protein ZnuB low > 85
Dickeya dianthicola ME23 0.74 DZA65_RS02565 alkyl hydroperoxide reductase subunit C 0.51 DZA65_RS10535 zinc ABC transporter permease subunit ZnuB low > 75
Dickeya dianthicola 67-19 0.74 HGI48_RS02460 alkyl hydroperoxide reductase subunit C 0.51 HGI48_RS10120 zinc ABC transporter permease subunit ZnuB low > 71
Marinobacter adhaerens HP15 0.72 HP15_3622 peroxiredoxin 0.58 HP15_3523 zinc ABC transporter, permease protein
Parabacteroides merdae CL09T00C40 0.72 HMPREF1078_RS04205 alkyl hydroperoxide reductase subunit C 0.17 HMPREF1078_RS05625 metal ABC transporter permease low > 61
Bacteroides thetaiotaomicron VPI-5482 0.72 BT2812 alkyl hydroperoxide reductase C22 protein (NCBI ptt file) 0.23 BT2206 Zinc ABC transporter, permease (NCBI ptt file) low > 81
Bacteroides ovatus ATCC 8483 0.72 BACOVA_02068 peroxiredoxin 0.23 BACOVA_03147 ABC 3 transport family protein low > 94
Pseudomonas stutzeri RCH2 0.70 Psest_1133 peroxiredoxin 0.77 Psest_4310 ABC-type Mn2+/Zn2+ transport systems, permease components
Bacteroides stercoris CC31F 0.70 HMPREF1181_RS02155 peroxiredoxin 0.22 HMPREF1181_RS09340 metal ABC transporter permease low > 56
Pseudomonas sp. S08-1 0.68 OH686_18680 peroxiredoxin 0.69 OH686_12250 Zinc ABC transporter, permease protein ZnuB low > 80
Phocaeicola vulgatus CL09T03C04 0.68 HMPREF1058_RS09540 peroxiredoxin 0.20 HMPREF1058_RS13960 metal ABC transporter permease low > 67
Phocaeicola dorei CL03T12C01 0.68 ABI39_RS03995 peroxiredoxin 0.20 ABI39_RS09565 metal ABC transporter permease low > 72
Bifidobacterium breve UCC2003 0.57 BBR_RS10460 peroxiredoxin 0.17 BBR_RS14255 metal ABC transporter permease
Desulfovibrio vulgaris Miyazaki F 0.48 DvMF_0219 Peroxiredoxin (RefSeq) 0.20 DvMF_0117 ABC-3 protein (RefSeq) low > 51
Synechococcus elongatus PCC 7942 0.40 Synpcc7942_2309 2-cys prx thioredoxin peroxidase 0.23 Synpcc7942_2573 mntB manganese transport system membrane protein MntB low > 38
Vibrio cholerae E7946 ATCC 55056 0.37 CSW01_03815 peroxidase 0.50 CSW01_10410 zinc ABC transporter permease low > 62
Serratia liquefaciens MT49 0.36 IAI46_04825 peroxiredoxin C 0.51 IAI46_14615 zinc ABC transporter permease subunit ZnuB low > 86
Erwinia tracheiphila SCR3 0.35 LU632_RS18475 peroxiredoxin C 0.55 LU632_RS13405 znuB zinc ABC transporter permease subunit ZnuB
Rahnella sp. WP5 0.35 EX31_RS22080 peroxiredoxin C 0.52 EX31_RS10685 zinc ABC transporter permease subunit ZnuB low > 89

Not shown: 34 genomes with orthologs for Psyr_2975 only; 6 genomes with orthologs for Psyr_0278 only