| Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
|---|
| Pseudomonas fluorescens GW456-L13 | 1.0 | PfGW456L13_2035 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 1.0 | PfGW456L13_4041 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | 0.52 | 12 |
| Pseudomonas fluorescens FW300-N1B4 | 0.98 | Pf1N1B4_3508 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.96 | Pf1N1B4_3903 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | — | — |
| Pseudomonas fluorescens FW300-N2E3 | 0.97 | AO353_02710 | | (p)ppGpp synthetase | 0.97 | AO353_00510 | | multifunctional fatty acid oxidation complex subunit alpha | low | > 101 |
| Pseudomonas fluorescens FW300-N2C3 | 0.97 | AO356_19060 | | (p)ppGpp synthetase | 0.96 | AO356_02330 | | multifunctional fatty acid oxidation complex subunit alpha | — | — |
| Pseudomonas fluorescens FW300-N2E2 | 0.97 | Pf6N2E2_5723 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) | 0.96 | Pf6N2E2_2290 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | — | — |
| Pseudomonas sp. RS175 | 0.96 | PFR28_03223 | | GTP pyrophosphokinase | 0.96 | PFR28_01110 | | Fatty acid oxidation complex subunit alpha | low | > 88 |
| Pseudomonas fluorescens SBW25 | 0.95 | PFLU_RS22095 | | GTP diphosphokinase | 0.95 | PFLU_RS07650 | | fatty acid oxidation complex subunit alpha FadB | 0.84 | 26 |
| Pseudomonas fluorescens SBW25-INTG | 0.95 | PFLU_RS22095 | | GTP diphosphokinase | 0.95 | PFLU_RS07650 | | fatty acid oxidation complex subunit alpha FadB | 0.54 | 9 |
| Pseudomonas simiae WCS417 | 0.95 | PS417_20150 | | (p)ppGpp synthetase | 0.95 | PS417_07575 | | multifunctional fatty acid oxidation complex subunit alpha | — | — |
| Pseudomonas syringae pv. syringae B728a | 0.93 | Psyr_3695 | | RelA/SpoT protein | 0.91 | Psyr_3290 | | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase | low | > 86 |
| Pseudomonas syringae pv. syringae B728a ΔmexB | 0.93 | Psyr_3695 | | RelA/SpoT protein | 0.91 | Psyr_3290 | | 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase | low | > 86 |
| Pseudomonas putida KT2440 | 0.91 | PP_1656 | | ATP:GTP 3'-pyrophosphotransferase | 0.90 | PP_2136 | | enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase | low | > 96 |
| Pseudomonas stutzeri RCH2 | 0.89 | Psest_1640 | | (p)ppGpp synthetase, RelA/SpoT family | 0.86 | Psest_2654 | | fatty oxidation complex, alpha subunit FadB | — | — |
| Pseudomonas sp. S08-1 | 0.88 | OH686_18960 | | Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I | 0.86 | OH686_21925 | | fatty oxidation complex, alpha subunit FadB | low | > 80 |
| Marinobacter adhaerens HP15 | 0.63 | HP15_791 | | (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA | 0.70 | HP15_1512 | | Enoyl-CoA hydratase (EC 4.2.1.17) (from data) | low | > 73 |
| Rahnella sp. WP5 | 0.48 | EX31_RS07955 | | GTP diphosphokinase | 0.52 | EX31_RS14565 | | fatty acid oxidation complex subunit alpha FadB | low | > 89 |
| Shewanella oneidensis MR-1 | 0.48 | SO3455 | relA | GTP pyrophosphokinase (NCBI ptt file) | 0.57 | SO0021 | fadB | fatty oxidation complex, alpha subunit (NCBI ptt file) | low | > 76 |
| Shewanella sp. ANA-3 | 0.47 | Shewana3_1111 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | 0.58 | Shewana3_0024 | fadB | Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data) | low | > 73 |
| Dickeya dianthicola 67-19 | 0.47 | HGI48_RS17070 | | GTP diphosphokinase | 0.48 | HGI48_RS00975 | | fatty acid oxidation complex subunit alpha FadB | low | > 71 |
| Dickeya dadantii 3937 | 0.47 | DDA3937_RS17015 | | GTP diphosphokinase | 0.50 | DDA3937_RS20250 | | fatty acid oxidation complex subunit alpha FadB | low | > 74 |
| Klebsiella michiganensis M5al | 0.47 | BWI76_RS22805 | | GTP diphosphokinase | 0.54 | BWI76_RS01365 | | multifunctional fatty acid oxidation complex subunit alpha | low | > 92 |
| Pectobacterium carotovorum WPP14 | 0.47 | HER17_RS04115 | | GTP diphosphokinase | 0.54 | HER17_RS20550 | | fatty acid oxidation complex subunit alpha FadB | low | > 75 |
| Dickeya dianthicola ME23 | 0.47 | DZA65_RS18145 | | GTP diphosphokinase | 0.48 | DZA65_RS01035 | | fatty acid oxidation complex subunit alpha FadB | low | > 75 |
| Escherichia coli ECRC62 | 0.47 | BNILDI_10630 | relA | GTP diphosphokinase | 0.54 | BNILDI_05155 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 75 |
| Escherichia coli ECRC101 | 0.47 | MCAODC_10775 | relA | GTP diphosphokinase | 0.56 | MCAODC_04750 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 87 |
| Escherichia coli HS(pFamp)R (ATCC 700891) | 0.47 | OHPLBJKB_00947 | | GTP pyrophosphokinase | 0.54 | OHPLBJKB_04207 | | Fatty acid oxidation complex subunit alpha | low | > 73 |
| Escherichia coli ECRC102 | 0.47 | NIAGMN_18020 | relA | GTP diphosphokinase | 0.56 | NIAGMN_12000 | fadB | fatty acid oxidation complex subunit alpha FadB | — | — |
| Escherichia fergusonii Becca | 0.47 | EFB2_01133 | | GTP pyrophosphokinase | 0.54 | EFB2_04771 | | Fatty acid oxidation complex subunit alpha | low | > 86 |
| Escherichia coli ECRC100 | 0.47 | OKFHMN_20250 | relA | GTP diphosphokinase | 0.56 | OKFHMN_14245 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 80 |
| Escherichia coli BL21 | 0.47 | ECD_02629 | | (p)ppGpp synthetase I/GTP pyrophosphokinase | 0.54 | ECD_03737 | | fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase | low | > 61 |
| Serratia liquefaciens MT49 | 0.47 | IAI46_03600 | | GTP diphosphokinase | 0.55 | IAI46_01130 | | fatty acid oxidation complex subunit alpha FadB | low | > 86 |
| Escherichia coli ECRC99 | 0.47 | KEDOAH_07880 | relA | GTP diphosphokinase | 0.56 | KEDOAH_13905 | fadB | fatty acid oxidation complex subunit alpha FadB | — | — |
| Escherichia coli ECRC98 | 0.47 | JDDGAC_23915 | relA | GTP diphosphokinase | 0.56 | JDDGAC_17870 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 86 |
| Escherichia coli ECOR38 | 0.47 | HEPCGN_19500 | relA | GTP diphosphokinase | 0.56 | HEPCGN_12875 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 87 |
| Escherichia coli ECOR27 | 0.47 | NOLOHH_12125 | relA | GTP diphosphokinase | 0.56 | NOLOHH_06375 | fadB | fatty acid oxidation complex subunit alpha FadB | low | > 75 |
| Escherichia coli Nissle 1917 | 0.47 | ECOLIN_RS15515 | | GTP diphosphokinase | 0.28 | ECOLIN_RS13550 | | fatty acid oxidation complex subunit alpha FadJ | low | > 55 |
| Escherichia coli BW25113 | 0.47 | b2784 | relA | (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) | 0.56 | b3846 | fadB | fused 3-hydroxybutyryl-CoA epimerase/delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase/enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (NCBI) | low | > 76 |
| Pantoea sp. MT58 | 0.47 | IAI47_04120 | | GTP diphosphokinase | 0.53 | IAI47_18230 | | fatty acid oxidation complex subunit alpha FadB | low | > 76 |
| Erwinia amylovora T8 | 0.47 | OLJFJH_09245 | | GTP diphosphokinase | 0.51 | OLJFJH_06555 | | fatty acid oxidation complex subunit alpha FadB | low | > 58 |
| Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 | 0.46 | GFF4837 | | 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 | 0.54 | GFF273 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 78 |
| Shewanella amazonensis SB2B | 0.46 | Sama_1033 | | GTP diphosphokinase (RefSeq) | 0.56 | Sama_0032 | fadB | Enoyl-CoA hydratase (EC 4.2.1.17); 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) (from data) | low | > 62 |
| Enterobacter asburiae PDN3 | 0.46 | EX28DRAFT_2864 | | (p)ppGpp synthetase, RelA/SpoT family | 0.54 | EX28DRAFT_4510 | | fatty oxidation complex, alpha subunit FadB | low | > 76 |
| Enterobacter sp. TBS_079 | 0.46 | MPMX20_03653 | | GTP pyrophosphokinase | 0.54 | MPMX20_04436 | | Fatty acid oxidation complex subunit alpha | low | > 85 |
| Shewanella loihica PV-4 | 0.45 | Shew_1202 | | (p)ppGpp synthetase I, SpoT/RelA (RefSeq) | 0.57 | Shew_0019 | fadB | multifunctional fatty acid oxidation complex subunit alpha (RefSeq) | low | > 60 |
| Vibrio cholerae E7946 ATCC 55056 | 0.45 | CSW01_12405 | | GTP diphosphokinase | 0.55 | CSW01_13970 | | fatty acid oxidation complex subunit alpha FadB | low | > 62 |
| Alteromonas macleodii MIT1002 | 0.45 | MIT1002_00794 | | GTP pyrophosphokinase | 0.55 | MIT1002_00575 | | Fatty acid oxidation complex subunit alpha | low | > 70 |
| Kangiella aquimarina DSM 16071 | 0.43 | B158DRAFT_2277 | | (p)ppGpp synthetase, RelA/SpoT family | 0.56 | B158DRAFT_0356 | | fatty oxidation complex, alpha subunit FadB | low | > 40 |
| Acinetobacter radioresistens SK82 | 0.43 | MPMX26_00539 | | GTP pyrophosphokinase | 0.61 | MPMX26_00226 | | Fatty acid oxidation complex subunit alpha | low | > 36 |
| Dechlorosoma suillum PS | 0.42 | Dsui_2816 | | (p)ppGpp synthetase, RelA/SpoT family | 0.20 | Dsui_0323 | | 3-hydroxyacyl-CoA dehydrogenase | low | > 51 |
| Dyella japonica UNC79MFTsu3.2 | 0.42 | ABZR86_RS19725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.25 | ABZR86_RS07195 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 74 |
| Rhodanobacter denitrificans MT42 | 0.41 | LRK55_RS12430 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.24 | LRK55_RS16640 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 63 |
| Rhodanobacter denitrificans FW104-10B01 | 0.41 | LRK54_RS12725 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.24 | LRK54_RS16925 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 59 |
| Rhodanobacter sp. FW510-T8 | 0.40 | OKGIIK_02170 | relA | GTP diphosphokinase | 0.25 | OKGIIK_07915 | | 3-hydroxyacyl-CoA dehydrogenase | low | > 52 |
| Xanthomonas campestris pv. campestris strain 8004 | 0.38 | Xcc-8004.1489.1 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.24 | Xcc-8004.3683.1 | | Enoyl-CoA hydratase (EC 4.2.1.17) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 74 |
| Lysobacter sp. OAE881 | 0.36 | ABIE51_RS05170 | | bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | 0.24 | ABIE51_RS13895 | | 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein | low | > 62 |
| Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.35 | GFF4925 | | GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I | 0.40 | GFF2109 | | Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3) | low | > 90 |
Not shown: 25 genomes with orthologs for PfGW456L13_2035 only; 1 genomes with orthologs for PfGW456L13_4041 only