Conservation of cofitness between Pf1N1B4_1187 and Pf1N1B4_2683 in Pseudomonas fluorescens FW300-N1B4

47 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_1187 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 1.0 Pf1N1B4_2683 LrgA-associated membrane protein LrgB 0.50 6
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_5115 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 0.96 PfGW456L13_1351 LrgA-associated membrane protein LrgB low > 87
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_05705 oxidoreductase 0.95 AO353_06515 hypothetical protein 0.56 6
Pseudomonas fluorescens FW300-N2E2 0.95 Pf6N2E2_3381 Predicted L-lactate dehydrogenase, Fe-S oxidoreductase subunit YkgE 0.91 Pf6N2E2_4989 LrgA-associated membrane protein LrgB 0.54 11
Pseudomonas fluorescens FW300-N2C3 0.95 AO356_07555 oxidoreductase 0.90 AO356_15270 hypothetical protein 0.56 8
Pseudomonas sp. RS175 0.93 PFR28_00062 Lactate utilization protein A 0.90 PFR28_03876 Inner membrane protein YohK low > 88
Pseudomonas stutzeri RCH2 0.85 Psest_0954 Fe-S oxidoreductase 0.70 Psest_0505 Putative effector of murein hydrolase low > 67
Marinobacter adhaerens HP15 0.72 HP15_4088 L-lactate dehydrogenase, LutA subunit (from data) 0.37 HP15_2943 LrgB family protein low > 73
Paraburkholderia sabiae LMG 24235 0.53 QEN71_RS10140 (Fe-S)-binding protein 0.18 QEN71_RS28735 LrgB family protein low > 153
Azospirillum brasilense Sp245 0.52 AZOBR_RS25115 Fe-S oxidoreductase 0.36 AZOBR_RS12150 membrane protein low > 97
Cupriavidus basilensis FW507-4G11 0.52 RR42_RS21295 L-lactate dehydrogenase, LutA subunit (from data) 0.32 RR42_RS17325 membrane protein low > 128
Azospirillum sp. SherDot2 0.52 MPMX19_06093 Lactate utilization protein A 0.33 MPMX19_01820 Inner membrane protein YohK 0.47 55
Rhodospirillum rubrum S1H 0.47 Rru_A1413 Protein of unknown function DUF224, cysteine-rich region (NCBI) 0.31 Rru_A2427 LrgB-like protein (NCBI) low > 58
Magnetospirillum magneticum AMB-1 0.47 AMB_RS20885 (Fe-S)-binding protein 0.33 AMB_RS06665 LrgB family protein low > 64
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS01610 (Fe-S)-binding protein 0.34 RALBFv3_RS05510 LrgB family protein low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS14920 (Fe-S)-binding protein 0.34 UW163_RS08115 LrgB family protein — —
Ralstonia solanacearum PSI07 0.34 RPSI07_RS15875 (Fe-S)-binding protein 0.31 RPSI07_RS11790 LrgB family protein low > 81
Paraburkholderia graminis OAS925 0.34 ABIE53_002787 L-lactate dehydrogenase complex protein LldE 0.36 ABIE53_005942 putative murein hydrolase (TIGR00659 family) low > 113
Ralstonia solanacearum GMI1000 0.34 RS_RS08110 (Fe-S)-binding protein 0.32 RS_RS13370 LrgB family protein low > 80
Ralstonia sp. UNC404CL21Col 0.33 ABZR87_RS13410 (Fe-S)-binding protein 0.30 ABZR87_RS01160 LrgB family protein low > 80
Paraburkholderia bryophila 376MFSha3.1 0.33 H281DRAFT_00472 L-lactate dehydrogenase complex protein LldE 0.36 H281DRAFT_02851 TIGR00659 family protein — —
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS12810 Fe-S oxidoreductase 0.34 BPHYT_RS26565 membrane protein — —
Dechlorosoma suillum PS 0.32 Dsui_1582 Fe-S oxidoreductase 0.38 Dsui_0028 putative effector of murein hydrolase low > 51
Dickeya dianthicola ME23 0.27 DZA65_RS08665 (Fe-S)-binding protein 0.31 DZA65_RS08945 CidB/LrgB family autolysis modulator low > 75
Dickeya dianthicola 67-19 0.27 HGI48_RS08070 (Fe-S)-binding protein 0.31 HGI48_RS08655 CidB/LrgB family autolysis modulator low > 71
Dickeya dadantii 3937 0.27 DDA3937_RS07205 (Fe-S)-binding protein 0.29 DDA3937_RS08490 CidB/LrgB family autolysis modulator low > 74
Escherichia coli BL21 0.26 ECD_00262 cysteine-rich LutA family protein; putative electron transport chain YkgEFG component 0.30 ECD_02071 LrgB family inner membrane protein low > 61
Escherichia coli ECRC100 0.26 OKFHMN_09105 ykgE Uncharacterized protein YkgE 0.30 OKFHMN_23575 yohK CidB/LrgB family autolysis modulator low > 80
Escherichia coli BW25113 0.26 b0306 ykgE predicted oxidoreductase (NCBI) 0.30 b2142 yohK predicted inner membrane protein (NCBI) low > 76
Escherichia coli ECRC99 0.26 KEDOAH_18860 ykgE Uncharacterized protein YkgE 0.30 KEDOAH_04610 yohK CidB/LrgB family autolysis modulator — —
Escherichia coli ECRC62 0.26 BNILDI_00045 ykgE Uncharacterized protein YkgE 0.30 BNILDI_14065 yohK CidB/LrgB family autolysis modulator low > 75
Escherichia coli ECRC102 0.26 NIAGMN_07170 ykgE Uncharacterized protein YkgE 0.30 NIAGMN_21340 yohK CidB/LrgB family autolysis modulator — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.26 OHPLBJKB_03376 Lactate utilization protein A 0.30 OHPLBJKB_01569 Inner membrane protein YohK low > 73
Escherichia coli ECOR27 0.26 NOLOHH_01920 ykgE Uncharacterized protein YkgE 0.30 NOLOHH_15145 yohK CidB/LrgB family autolysis modulator low > 75
Escherichia coli ECRC98 0.26 JDDGAC_12755 ykgE Uncharacterized protein YkgE 0.30 JDDGAC_27530 yohK CidB/LrgB family autolysis modulator low > 86
Escherichia coli ECRC101 0.26 MCAODC_28330 ykgE Uncharacterized protein YkgE 0.30 MCAODC_14625 yohK CidB/LrgB family autolysis modulator low > 87
Escherichia fergusonii Becca 0.26 EFB2_03734 Lactate utilization protein A 0.30 EFB2_01714 Inner membrane protein YohK low > 86
Escherichia coli Nissle 1917 0.26 ECOLIN_RS02000 (Fe-S)-binding protein 0.31 ECOLIN_RS12540 CidB/LrgB family autolysis modulator low > 55
Escherichia coli ECOR38 0.26 HEPCGN_07630 ykgE Uncharacterized protein YkgE 0.30 HEPCGN_22840 yohK CidB/LrgB family autolysis modulator low > 87
Bacteroides thetaiotaomicron VPI-5482 0.23 BT4455 oxidoreductase, putative glycolate oxidase (NCBI ptt file) 0.30 BT3690 putative membrane protein (NCBI ptt file) 0.39 2
Parabacteroides merdae CL09T00C40 0.23 HMPREF1078_RS01305 (Fe-S)-binding protein 0.33 HMPREF1078_RS04920 LrgB family protein low > 61
Bacteroides ovatus ATCC 8483 0.23 BACOVA_05262 cysteine-rich domain protein 0.29 BACOVA_03497 putative TIGR00659 family protein low > 94
Shewanella amazonensis SB2B 0.23 Sama_2441 hypothetical protein (RefSeq) 0.15 Sama_2926 hypothetical protein (RefSeq) 0.79 4
Shewanella sp. ANA-3 0.22 Shewana3_2906 hypothetical protein (RefSeq) 0.14 Shewana3_0886 LrgB family protein (RefSeq) low > 73
Shewanella loihica PV-4 0.22 Shew_3004 hypothetical protein (RefSeq) 0.19 Shew_0830 LrgB family protein (RefSeq) low > 60
Phocaeicola vulgatus CL09T03C04 0.22 HMPREF1058_RS18100 (Fe-S)-binding protein 0.31 HMPREF1058_RS08495 LrgB family protein 0.35 42
Phocaeicola dorei CL03T12C01 0.21 ABI39_RS14425 (Fe-S)-binding protein 0.31 ABI39_RS02720 LrgB family protein 0.49 52
Shewanella oneidensis MR-1 0.21 SO1520 conserved hypothetical protein (NCBI ptt file) 0.14 SO1048 membrane protein, putative (NCBI ptt file) low > 76

Not shown: 6 genomes with orthologs for Pf1N1B4_1187 only; 27 genomes with orthologs for Pf1N1B4_2683 only