Conservation of cofitness between Pf1N1B4_57 and Pf1N1B4_1915 in Pseudomonas fluorescens FW300-N1B4

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas fluorescens FW300-N1B4 1.0 Pf1N1B4_57 tRNA dihydrouridine synthase A 1.0 Pf1N1B4_1915 Trk system potassium uptake protein TrkA 0.26 11
Pseudomonas fluorescens FW300-N2E3 0.96 AO353_00295 tRNA-dihydrouridine synthase A 0.95 AO353_10625 potassium transporter peripheral membrane component low > 101
Pseudomonas fluorescens FW300-N2E2 0.94 Pf6N2E2_2257 tRNA dihydrouridine synthase A 0.95 Pf6N2E2_4120 Trk system potassium uptake protein TrkA low > 103
Pseudomonas fluorescens FW300-N2C3 0.93 AO356_02170 tRNA-dihydrouridine synthase A 0.96 AO356_11270 potassium transporter peripheral membrane component low > 104
Pseudomonas sp. RS175 0.93 PFR28_01143 tRNA-dihydrouridine(20/20a) synthase 0.95 PFR28_04664 Trk system potassium uptake protein TrkA 0.29 50
Pseudomonas fluorescens GW456-L13 0.92 PfGW456L13_3987 tRNA dihydrouridine synthase A 0.96 PfGW456L13_653 Trk system potassium uptake protein TrkA low > 87
Pseudomonas fluorescens SBW25 0.90 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.94 PFLU_RS00075 Trk system potassium transporter TrkA 0.68 59
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS07810 tRNA dihydrouridine(20/20a) synthase DusA 0.94 PFLU_RS00075 Trk system potassium transporter TrkA low > 109
Pseudomonas simiae WCS417 0.90 PS417_07740 tRNA-dihydrouridine synthase A 0.94 PS417_00080 potassium transporter peripheral membrane component low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.85 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.88 Psyr_0016 TrkA-N:TrkA-C low > 86
Pseudomonas syringae pv. syringae B728a 0.85 Psyr_1936 tRNA-U16,U17-dihydrouridine synthase 0.88 Psyr_0016 TrkA-N:TrkA-C low > 86
Pseudomonas putida KT2440 0.84 PP_2169 tRNA-dihydrouridine synthase A 0.93 PP_0065 NAD-binding component of TrK potassium transporter low > 96
Pseudomonas sp. S08-1 0.84 OH686_22745 tRNA-dihydrouridine(20/20a) synthase 0.90 OH686_12530 Trk potassium uptake system protein TrkA — —
Pseudomonas stutzeri RCH2 0.82 Psest_2706 tRNA dihydrouridine synthase A 0.90 Psest_0020 K+ transport systems, NAD-binding component low > 67
Marinobacter adhaerens HP15 0.63 HP15_2240 tRNA-dihydrouridine synthase, TIM-barrel, YjbN 0.68 HP15_3741 potassium transporter peripheral membrane component — —
Shewanella loihica PV-4 0.59 Shew_0536 tRNA-dihydrouridine synthase A (RefSeq) 0.63 Shew_3739 trkA potassium transporter peripheral membrane component (RefSeq) — —
Shewanella amazonensis SB2B 0.59 Sama_3055 tRNA-dihydrouridine synthase A (RefSeq) 0.63 Sama_0040 trkA potassium transporter peripheral membrane component (RefSeq) — —
Shewanella sp. ANA-3 0.59 Shewana3_0718 tRNA-dihydrouridine synthase A (RefSeq) 0.63 Shewana3_0032 trkA potassium transporter peripheral membrane component (RefSeq) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.59 OHPLBJKB_03994 tRNA-dihydrouridine(20/20a) synthase 0.65 OHPLBJKB_00414 Trk system potassium uptake protein TrkA — —
Escherichia coli ECRC62 0.59 BNILDI_06330 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 BNILDI_02205 trkA Trk system potassium transporter TrkA low > 75
Escherichia coli ECOR27 0.59 NOLOHH_05195 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 NOLOHH_09315 trkA Trk system potassium transporter TrkA — —
Escherichia coli ECRC102 0.59 NIAGMN_10790 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 NIAGMN_15285 trkA Trk system potassium transporter TrkA — —
Escherichia coli BL21 0.59 ECD_03921 tRNA-dihydrouridine synthase A 0.65 ECD_03140 NAD-binding component of TrK potassium transporter — —
Escherichia coli BW25113 0.59 b4049 dusA tRNA-dihydrouridine synthase A (RefSeq) 0.65 b3290 trkA potassium transporter peripheral membrane component (NCBI) low > 76
Escherichia coli ECRC99 0.59 KEDOAH_15205 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 KEDOAH_10625 trkA Trk system potassium transporter TrkA — —
Escherichia coli ECOR38 0.59 HEPCGN_11560 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 HEPCGN_16345 trkA Trk system potassium transporter TrkA low > 87
Vibrio cholerae E7946 ATCC 55056 0.59 CSW01_01985 tRNA dihydrouridine(20/20a) synthase DusA 0.64 CSW01_00220 Trk system potassium transporter TrkA — —
Escherichia coli ECRC98 0.59 JDDGAC_16580 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 JDDGAC_21145 trkA Trk system potassium transporter TrkA — —
Escherichia coli ECRC100 0.59 OKFHMN_12945 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 OKFHMN_17515 trkA Trk system potassium transporter TrkA — —
Escherichia coli Nissle 1917 0.59 ECOLIN_RS23355 tRNA dihydrouridine(20/20a) synthase DusA 0.65 ECOLIN_RS18880 Trk system potassium transporter TrkA — —
Escherichia fergusonii Becca 0.58 EFB2_04556 tRNA-dihydrouridine(20/20a) synthase 0.65 EFB2_00534 Trk system potassium uptake protein TrkA — —
Serratia liquefaciens MT49 0.58 IAI46_22970 tRNA dihydrouridine(20/20a) synthase DusA 0.66 IAI46_23280 Trk system potassium transporter TrkA — —
Shewanella oneidensis MR-1 0.58 SO3912 TIM-barrel protein, yjbN family (NCBI ptt file) 0.64 SO0029 trkA potassium uptake protein TrkA (NCBI ptt file) low > 76
Rahnella sp. WP5 0.58 EX31_RS11865 tRNA dihydrouridine(20/20a) synthase DusA 0.66 EX31_RS15990 Trk system potassium transporter TrkA — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.58 GFF1418 tRNA dihydrouridine synthase A (EC 1.-.-.-) 0.65 GFF2389 Trk system potassium uptake protein TrkA low > 78
Pectobacterium carotovorum WPP14 0.58 HER17_RS03680 tRNA dihydrouridine(20/20a) synthase DusA 0.65 HER17_RS02210 Trk system potassium transporter TrkA low > 75
Escherichia coli ECRC101 0.58 MCAODC_03455 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 MCAODC_08045 trkA Trk system potassium transporter TrkA — —
Enterobacter sp. TBS_079 0.58 MPMX20_00265 tRNA-dihydrouridine(20/20a) synthase 0.65 MPMX20_04197 Trk system potassium uptake protein TrkA low > 85
Enterobacter asburiae PDN3 0.58 EX28DRAFT_4263 tRNA dihydrouridine synthase A 0.65 EX28DRAFT_0038 K+ transport systems, NAD-binding component low > 76
Klebsiella michiganensis M5al 0.58 BWI76_RS01900 tRNA-dihydrouridine synthase A 0.65 BWI76_RS25685 Trk system potassium transport protein TrkA — —
Dickeya dianthicola ME23 0.57 DZA65_RS18620 tRNA dihydrouridine(20/20a) synthase DusA 0.64 DZA65_RS20355 Trk system potassium transporter TrkA low > 75
Dickeya dadantii 3937 0.57 DDA3937_RS17480 tRNA dihydrouridine(20/20a) synthase DusA 0.64 DDA3937_RS19140 Trk system potassium transporter TrkA low > 74
Kangiella aquimarina DSM 16071 0.57 B158DRAFT_2018 tRNA dihydrouridine synthase A 0.66 B158DRAFT_0395 K+ transport systems, NAD-binding component — —
Dickeya dianthicola 67-19 0.57 HGI48_RS17540 tRNA dihydrouridine(20/20a) synthase DusA 0.64 HGI48_RS19230 Trk system potassium transporter TrkA low > 71
Pantoea sp. MT58 0.56 IAI47_17865 tRNA dihydrouridine(20/20a) synthase DusA 0.66 IAI47_02275 Trk system potassium transporter TrkA — —
Azospirillum brasilense Sp245 0.55 AZOBR_RS15935 tRNA-dihydrouridine synthase A 0.37 AZOBR_RS14450 potassium transporter TrkA low > 97
Hydrogenophaga sp. GW460-11-11-14-LB1 0.54 GFF4791 tRNA dihydrouridine synthase A 0.51 GFF1720 Trk system potassium uptake protein TrkA low > 90
Alteromonas macleodii MIT1002 0.53 MIT1002_03387 putative tRNA-dihydrouridine synthase 0.64 MIT1002_00017 Trk system potassium uptake protein TrkA — —
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2288 tRNA dihydrouridine synthase A 0.47 Ac3H11_705 Trk system potassium uptake protein TrkA low > 79
Erwinia tracheiphila SCR3 0.52 LU632_RS23765 dusA tRNA dihydrouridine(20/20a) synthase DusA 0.65 LU632_RS22485 trkA Trk system potassium transporter TrkA low > 74
Rhodospirillum rubrum S1H 0.50 Rru_A1621 Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) 0.40 Rru_A1681 Potassium uptake protein (NCBI) — —
Dinoroseobacter shibae DFL-12 0.50 Dshi_2512 TIM-barrel protein, yjbN family (RefSeq) 0.32 Dshi_1569 TrkA-N domain protein (RefSeq) — —
Agrobacterium fabrum C58 0.48 Atu1515 hypothetical protein 0.35 Atu1449 potassium uptake protein low > 89
Phaeobacter inhibens DSM 17395 0.45 PGA1_c19230 tRNA-dihydrouridine synthase A 0.28 PGA1_c14830 trk system potassium uptake protein TrkA — —
Sinorhizobium meliloti 1021 0.44 SMc04235 tRNA-dihydrouridine synthase A 0.38 SMc01046 potassium transporter peripheral membrane protein — —

Not shown: 29 genomes with orthologs for Pf1N1B4_57 only; 10 genomes with orthologs for Pf1N1B4_1915 only