Conservation of cofitness between PP_5146 and PP_5145 in Pseudomonas putida KT2440

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5146 RNA pyrophosphohydrolase 1.0 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.66 1
Pseudomonas simiae WCS417 0.99 PS417_26990 RNA pyrophosphohydrolase 0.91 PS417_26985 phosphoenolpyruvate-protein phosphotransferase 0.23 76
Pseudomonas fluorescens SBW25-INTG 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.92 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase 0.47 21
Pseudomonas fluorescens SBW25 0.99 PFLU_RS28650 RNA pyrophosphohydrolase 0.92 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase 0.81 49
Pseudomonas fluorescens GW456-L13 0.98 PfGW456L13_952 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.93 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.62 1
Pseudomonas sp. RS175 0.98 PFR28_04831 RNA pyrophosphohydrolase 0.93 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system 0.65 1
Pseudomonas fluorescens FW300-N2E2 0.98 Pf6N2E2_3941 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.93 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.62 1
Pseudomonas fluorescens FW300-N1B4 0.98 Pf1N1B4_2283 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-) 0.94 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens FW300-N2C3 0.98 AO356_10345 RNA pyrophosphohydrolase 0.93 AO356_10350 phosphoenolpyruvate-protein phosphotransferase 0.65 1
Pseudomonas syringae pv. syringae B728a ΔmexB 0.98 Psyr_4843 NUDIX hydrolase 0.93 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.98 Psyr_4843 NUDIX hydrolase 0.93 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase 0.71 1
Pseudomonas fluorescens FW300-N2E3 0.98 AO353_08470 RNA pyrophosphohydrolase 0.93 AO353_08465 phosphoenolpyruvate-protein phosphotransferase 0.70 1
Pseudomonas sp. S08-1 0.92 OH686_11425 Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase 0.87 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 80
Pseudomonas stutzeri RCH2 0.92 Psest_3863 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.86 Psest_3862 phosphoenolpyruvate-protein phosphotransferase — —
Acinetobacter radioresistens SK82 0.71 MPMX26_00342 RNA pyrophosphohydrolase 0.53 MPMX26_00341 Phosphoenolpyruvate-dependent phosphotransferase system low > 36
Enterobacter asburiae PDN3 0.70 EX28DRAFT_2905 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.38 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase — —
Escherichia fergusonii Becca 0.70 EFB2_01054 RNA pyrophosphohydrolase 0.39 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system — —
Escherichia coli Nissle 1917 0.70 ECOLIN_RS15880 RNA pyrophosphohydrolase 0.39 ECOLIN_RS15875 phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli BW25113 0.70 b2830 nudH dinucleoside polyphosphate hydrolase (NCBI) 0.39 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 0.70 OHPLBJKB_00900 RNA pyrophosphohydrolase 0.39 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system — —
Escherichia coli BL21 0.70 ECD_02678 RNA pyrophosphohydrolase 0.39 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein — —
Dickeya dianthicola ME23 0.70 DZA65_RS05295 RNA pyrophosphohydrolase 0.38 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC99 0.69 KEDOAH_08130 rppH RNA pyrophosphohydrolase 0.39 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC101 0.69 OKFHMN_20000 rppH RNA pyrophosphohydrolase 0.39 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECOR27 0.69 NOLOHH_11885 rppH RNA pyrophosphohydrolase 0.39 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Dickeya dianthicola 67-19 0.69 HGI48_RS04955 RNA pyrophosphohydrolase 0.38 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC62 0.69 BNILDI_10365 rppH RNA pyrophosphohydrolase 0.39 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC102 0.69 NIAGMN_17770 rppH RNA pyrophosphohydrolase 0.39 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC98 0.69 JDDGAC_23665 rppH RNA pyrophosphohydrolase 0.39 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECOR38 0.69 HEPCGN_19255 rppH RNA pyrophosphohydrolase 0.39 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC101 0.69 MCAODC_10525 rppH RNA pyrophosphohydrolase 0.39 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Dickeya dadantii 3937 0.69 DDA3937_RS04945 RNA pyrophosphohydrolase 0.38 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Pectobacterium carotovorum WPP14 0.69 HER17_RS16585 RNA pyrophosphohydrolase 0.37 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase — —
Pantoea sp. MT58 0.69 IAI47_03915 RNA pyrophosphohydrolase 0.38 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase 0.51 8
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.69 GFF1312 'Adenosine (5')-pentaphospho-(5'')-adenosine pyrophosphohydrolase (EC 3.6.1.-)' transl_table=11 0.39 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 78
Klebsiella michiganensis M5al 0.69 BWI76_RS23275 RNA pyrophosphohydrolase 0.39 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP — —
Erwinia tracheiphila SCR3 0.69 LU632_RS06105 rppH RNA pyrophosphohydrolase 0.39 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Serratia liquefaciens MT49 0.69 IAI46_20455 RNA pyrophosphohydrolase 0.39 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase 0.38 70
Rahnella sp. WP5 0.68 EX31_RS13205 RNA pyrophosphohydrolase 0.40 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase — —
Shewanella amazonensis SB2B 0.67 Sama_0863 dinucleoside polyphosphate hydrolase (RefSeq) 0.41 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) — —
Shewanella loihica PV-4 0.67 Shew_1038 dinucleoside polyphosphate hydrolase (RefSeq) 0.41 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) — —
Alteromonas macleodii MIT1002 0.66 MIT1002_00647 RNA pyrophosphohydrolase 0.45 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase low > 70
Shewanella oneidensis MR-1 0.66 SO1331 MutT/nudix family protein (NCBI ptt file) 0.40 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.66 Shewana3_3043 dinucleoside polyphosphate hydrolase (RefSeq) 0.41 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) — —
Enterobacter sp. TBS_079 0.60 MPMX20_03693 RNA pyrophosphohydrolase 0.38 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system — —
Phaeobacter inhibens DSM 17395 0.36 PGA1_c29090 RNA pyrophosphohydrolase RppH 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP — —
Azospirillum sp. SherDot2 0.34 MPMX19_01945 RNA pyrophosphohydrolase 0.26 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system low > 112
Rhodospirillum rubrum S1H 0.34 Rru_A1230 NUDIX hydrolase (NCBI) 0.25 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) — —
Azospirillum brasilense Sp245 0.32 AZOBR_RS04025 RNA pyrophosphohydrolase 0.26 AZOBR_RS18900 peptidase low > 97
Sphingomonas koreensis DSMZ 15582 0.31 Ga0059261_4001 NTP pyrophosphohydrolases including oxidative damage repair enzymes 0.25 Ga0059261_2514 phosphoenolpyruvate-protein phosphotransferase low > 68
Magnetospirillum magneticum AMB-1 0.31 AMB_RS01525 RNA pyrophosphohydrolase 0.26 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase low > 64
Bosea sp. OAE506 0.30 ABIE41_RS07545 RNA pyrophosphohydrolase 0.26 ABIE41_RS23820 phosphoenolpyruvate--protein phosphotransferase — —
Dinoroseobacter shibae DFL-12 0.30 Dshi_0092 NUDIX hydrolase (RefSeq) 0.21 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq) low > 64
Rhizobium sp. OAE497 0.29 ABIE40_RS18985 RNA pyrophosphohydrolase 0.27 ABIE40_RS17300 phosphoenolpyruvate--protein phosphotransferase — —
Brevundimonas sp. GW460-12-10-14-LB2 0.28 A4249_RS12500 RNA pyrophosphohydrolase 0.26 A4249_RS14485 phosphoenolpyruvate--protein phosphotransferase — —
Rhodopseudomonas palustris CGA009 0.28 TX73_000905 RNA pyrophosphohydrolase 0.29 TX73_003130 phosphoenolpyruvate--protein phosphotransferase low > 86
Caulobacter crescentus NA1000 0.27 CCNA_03553 diadenosine tetraphosphate (Ap4A) hydrolase 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 66
Caulobacter crescentus NA1000 Δfur 0.27 CCNA_03553 diadenosine tetraphosphate (Ap4A) hydrolase 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 67
Agrobacterium fabrum C58 0.26 Atu2772 Invasion protein A 0.26 Atu4173 phosphoenolpyruvate-protein phosphotransferase low > 89
Sinorhizobium meliloti 1021 0.26 SMc03785 dinucleoside polyphosphate hydrolase 0.27 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein — —

Not shown: 7 genomes with orthologs for PP_5146 only; 2 genomes with orthologs for PP_5145 only