Conservation of cofitness between PP_5033 and PP_5029 in Pseudomonas putida KT2440

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5033 Urocanate hydratase 1.0 PP_5029 N-formylglutamate deformylase 0.52 2
Pseudomonas fluorescens GW456-L13 0.93 PfGW456L13_326 Urocanate hydratase (EC 4.2.1.49) (from data) 0.78 PfGW456L13_316 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.91 3
Pseudomonas fluorescens FW300-N1B4 0.93 Pf1N1B4_1587 Urocanate hydratase (EC 4.2.1.49) (from data) 0.77 Pf1N1B4_1578 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.66 5
Pseudomonas fluorescens FW300-N2E3 0.93 AO353_12250 Urocanate hydratase (EC 4.2.1.49) (from data) 0.78 AO353_12285 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.78 3
Pseudomonas sp. RS175 0.93 PFR28_04965 Urocanate hydratase 0.78 PFR28_04973 hypothetical protein low > 88
Pseudomonas fluorescens FW300-N2E2 0.93 Pf6N2E2_3805 Urocanate hydratase (EC 4.2.1.49) (from data) 0.78 Pf6N2E2_3797 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.84 3
Pseudomonas simiae WCS417 0.92 PS417_01720 Urocanate hydratase (EC 4.2.1.49) (from data) 0.77 PS417_01765 N-formylglutamate amidohydrolase — —
Cupriavidus basilensis FW507-4G11 0.92 RR42_RS14645 urocanate hydratase 0.50 RR42_RS16895 N-formylglutamate deformylase (EC 3.5.1.68) (from data) low > 128
Pseudomonas fluorescens FW300-N2C3 0.92 AO356_09630 Urocanate hydratase (EC 4.2.1.49) (from data) 0.77 AO356_09590 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.94 5
Pseudomonas fluorescens SBW25 0.92 PFLU_RS01775 urocanate hydratase 0.77 PFLU_RS01820 N-formylglutamate deformylase low > 109
Pseudomonas fluorescens SBW25-INTG 0.92 PFLU_RS01775 urocanate hydratase 0.77 PFLU_RS01820 N-formylglutamate deformylase low > 109
Serratia liquefaciens MT49 0.91 IAI46_03665 urocanate hydratase 0.60 IAI46_10605 N-formylglutamate deformylase low > 86
Pseudomonas syringae pv. syringae B728a 0.90 Psyr_4828 urocanate hydratase 0.75 Psyr_4836 N-formylglutamate deformylase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.90 Psyr_4828 urocanate hydratase 0.75 Psyr_4836 N-formylglutamate deformylase low > 86
Dyella japonica UNC79MFTsu3.2 0.84 ABZR86_RS07755 urocanate hydratase 0.41 ABZR86_RS08920 N-formylglutamate deformylase low > 74
Rhodanobacter denitrificans FW104-10B01 0.83 LRK54_RS16320 urocanate hydratase 0.45 LRK54_RS02595 N-formylglutamate deformylase low > 59
Rhodanobacter denitrificans MT42 0.83 LRK55_RS16070 urocanate hydratase 0.45 LRK55_RS02350 N-formylglutamate deformylase low > 63
Rhodanobacter sp. FW510-T8 0.82 OKGIIK_08350 hutU urocanate hydratase 0.44 OKGIIK_09650 hutG N-formylglutamate deformylase low > 52
Lysobacter sp. OAE881 0.81 ABIE51_RS06295 urocanate hydratase 0.47 ABIE51_RS06415 N-formylglutamate deformylase 0.85 24
Sinorhizobium meliloti 1021 0.77 SM_b21163 Urocanate hydratase (EC 4.2.1.49) (from data) 0.34 SM_b21164 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.83 3
Variovorax sp. SCN45 0.77 GFF6408 Urocanate hydratase (EC 4.2.1.49) 0.49 GFF6400 N-formylglutamate deformylase (EC 3.5.1.68) low > 127
Agrobacterium fabrum C58 0.77 Atu3931 urocanate hydratase 0.39 Atu3932 hypothetical protein 0.37 5
Rhizobium sp. OAE497 0.76 ABIE40_RS20360 urocanate hydratase 0.17 ABIE40_RS16325 N-formylglutamate amidohydrolase low > 107
Variovorax sp. OAS795 0.76 ABID97_RS03425 urocanate hydratase 0.47 ABID97_RS03445 N-formylglutamate deformylase 0.95 2
Sphingomonas koreensis DSMZ 15582 0.76 Ga0059261_3961 Urocanate hydratase (EC 4.2.1.49) (from data) 0.38 Ga0059261_3962 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.49 34
Acidovorax sp. GW101-3H11 0.76 Ac3H11_2557 Urocanate hydratase (EC 4.2.1.49) (from data) 0.48 Ac3H11_2548 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.92 2
Hydrogenophaga sp. GW460-11-11-14-LB1 0.76 GFF3590 Urocanate hydratase (EC 4.2.1.49) 0.15 GFF627 N-formylglutamate deformylase (EC 3.5.1.68) low > 90
Bosea sp. OAE506 0.76 ABIE41_RS23655 urocanate hydratase 0.36 ABIE41_RS23650 N-formylglutamate deformylase 0.65 3
Rhodospirillum rubrum S1H 0.76 Rru_A1304 Urocanate hydratase (NCBI) 0.45 Rru_A1300 N-formylglutamate deformylase (NCBI) low > 58
Azospirillum brasilense Sp245 0.75 AZOBR_RS21740 urocanate hydratase 0.53 AZOBR_RS23510 N-formylglutamate amidohydrolase low > 97
Caulobacter crescentus NA1000 Δfur 0.75 CCNA_01008 urocanate hydratase 0.36 CCNA_01009 N-formylglutamate deformylase 0.77 15
Caulobacter crescentus NA1000 0.75 CCNA_01008 urocanate hydratase 0.36 CCNA_01009 N-formylglutamate deformylase 0.91 18
Azospirillum sp. SherDot2 0.75 MPMX19_04936 Urocanate hydratase 0.48 MPMX19_04941 hypothetical protein low > 112
Rahnella sp. WP5 0.75 EX31_RS06760 urocanate hydratase 0.63 EX31_RS06715 N-formylglutamate deformylase low > 89
Pantoea sp. MT58 0.74 IAI47_13280 urocanate hydratase 0.56 IAI47_13250 N-formylglutamate deformylase 0.40 13
Phaeobacter inhibens DSM 17395 0.74 PGA1_c36320 Urocanate hydratase (EC 4.2.1.49) (from data) 0.36 PGA1_c36330 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.67 4
Dickeya dadantii 3937 0.74 DDA3937_RS14990 urocanate hydratase 0.53 DDA3937_RS15065 N-formylglutamate deformylase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.73 Xcc-8004.3298.1 Urocanate hydratase (EC 4.2.1.49) 0.38 Xcc-8004.3297.1 N-formylglutamate deformylase (EC 3.5.1.68) low > 74
Brevundimonas sp. GW460-12-10-14-LB2 0.73 A4249_RS06625 urocanate hydratase 0.36 A4249_RS06620 N-formylglutamate deformylase low > 48
Dickeya dianthicola 67-19 0.73 HGI48_RS15085 urocanate hydratase 0.53 HGI48_RS15145 N-formylglutamate deformylase low > 71
Dickeya dianthicola ME23 0.72 DZA65_RS15830 urocanate hydratase 0.53 DZA65_RS15945 N-formylglutamate deformylase low > 75
Paraburkholderia sabiae LMG 24235 0.71 QEN71_RS23505 urocanate hydratase 0.53 QEN71_RS36425 N-formylglutamate deformylase low > 153
Burkholderia phytofirmans PsJN 0.71 BPHYT_RS07565 urocanate hydratase 0.45 BPHYT_RS07585 N-formylglutamate deformylase (EC 3.5.1.68) (from data) 0.51 3
Paraburkholderia graminis OAS925 0.71 ABIE53_001731 urocanate hydratase 0.45 ABIE53_001735 N-formylglutamate deformylase low > 113
Paraburkholderia bryophila 376MFSha3.1 0.71 H281DRAFT_04871 urocanate hydratase 0.44 H281DRAFT_04867 N-formylglutamate deformylase low > 103

Not shown: 20 genomes with orthologs for PP_5033 only; 2 genomes with orthologs for PP_5029 only