Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Pseudomonas putida KT2440 | 1.0 | PP_5093 | | twitching motility protein | 1.0 | PP_1319 | | Ubiquinol--cytochrome c reductase, cytochrome c1 | 0.17 | 3 |
Pseudomonas sp. S08-1 | 0.55 | OH686_10970 | | Twitching motility protein PilT | 0.89 | OH686_08380 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | — | — |
Shewanella amazonensis SB2B | 0.55 | Sama_2476 | | twitching motility protein (RefSeq) | 0.48 | Sama_3019 | | ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) | low | > 62 |
Marinobacter adhaerens HP15 | 0.55 | HP15_289 | | twitching motility protein PilT | 0.51 | HP15_547 | | ubiquinol-cytochrome c reductase, cytochrome c1 | — | — |
Pseudomonas stutzeri RCH2 | 0.55 | Psest_0285 | | pilus retraction protein PilT | 0.79 | Psest_3277 | | Cytochrome c1 | — | — |
Pseudomonas fluorescens FW300-N2E3 | 0.55 | AO353_08155 | | twitching motility protein PilT | 0.87 | AO353_15255 | | cytochrome C | — | — |
Shewanella sp. ANA-3 | 0.54 | Shewana3_1195 | | pilus retraction ATPase PilT (RefSeq) | 0.48 | Shewana3_0603 | | cytochrome c1 (RefSeq) | low | > 73 |
Vibrio cholerae E7946 ATCC 55056 | 0.54 | CSW01_02460 | | type IV pili twitching motility protein PilT | 0.47 | CSW01_03055 | | cytochrome c1 | low | > 62 |
Shewanella loihica PV-4 | 0.54 | Shew_1138 | | twitching motility protein (RefSeq) | 0.45 | Shew_0572 | | cytochrome c1 (RefSeq) | — | — |
Shewanella oneidensis MR-1 | 0.54 | SO3351 | pilT | twitching motility protein PilT (NCBI ptt file) | 0.48 | SO0610 | petC | ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) | low | > 76 |
Rhodanobacter denitrificans FW104-10B01 | 0.54 | LRK54_RS04255 | | type IV pilus twitching motility protein PilT | 0.35 | LRK54_RS13775 | | cytochrome c1 | — | — |
Rhodanobacter denitrificans MT42 | 0.54 | LRK55_RS04025 | | type IV pilus twitching motility protein PilT | 0.35 | LRK55_RS13490 | | cytochrome c1 | — | — |
Kangiella aquimarina DSM 16071 | 0.54 | B158DRAFT_0195 | | pilus retraction protein PilT | 0.42 | B158DRAFT_2102 | | Cytochrome c1 | — | — |
Rhodanobacter sp. FW510-T8 | 0.54 | OKGIIK_11130 | pilT | twitching motility protein PilT | 0.35 | OKGIIK_03015 | | cytochrome c1 | — | — |
Pseudomonas fluorescens GW456-L13 | 0.54 | PfGW456L13_1012 | | Twitching motility protein PilT | 0.90 | PfGW456L13_1636 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 87 |
Pseudomonas sp. RS175 | 0.54 | PFR28_04241 | | Twitching mobility protein | 0.90 | PFR28_03604 | | Ammonia monooxygenase gamma subunit | — | — |
Lysobacter sp. OAE881 | 0.53 | ABIE51_RS16055 | | type IV pilus twitching motility protein PilT | 0.41 | ABIE51_RS15430 | | cytochrome c1 | low | > 62 |
Pseudomonas fluorescens FW300-N2E2 | 0.53 | Pf6N2E2_4602 | | Twitching motility protein PilT | 0.89 | Pf6N2E2_5339 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 103 |
Dyella japonica UNC79MFTsu3.2 | 0.53 | ABZR86_RS10420 | | type IV pilus twitching motility protein PilT | 0.37 | ABZR86_RS09870 | | cytochrome c1 | low | > 74 |
Pseudomonas fluorescens FW300-N1B4 | 0.53 | Pf1N1B4_2343 | | Twitching motility protein PilT | 0.88 | Pf1N1B4_960 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 87 |
Xanthomonas campestris pv. campestris strain 8004 | 0.53 | Xcc-8004.1713.1 | | Twitching motility protein PilT | 0.40 | Xcc-8004.2230.1 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 74 |
Pseudomonas simiae WCS417 | 0.53 | PS417_26720 | | twitching motility protein PilT | 0.85 | PS417_04165 | | cytochrome C | — | — |
Alteromonas macleodii MIT1002 | 0.53 | MIT1002_03060 | | Twitching mobility protein | 0.48 | MIT1002_00816 | | Cytochrome c1 precursor | low | > 70 |
Pseudomonas fluorescens SBW25 | 0.53 | PFLU_RS28365 | | type IV pilus twitching motility protein PilT | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_13430 | | twitching motility protein PilT | 0.90 | AO356_17075 | | cytochrome C | low | > 104 |
Pseudomonas fluorescens SBW25-INTG | 0.53 | PFLU_RS28365 | | type IV pilus twitching motility protein PilT | 0.85 | PFLU_RS04205 | | cytochrome c1 | low | > 109 |
Ralstonia solanacearum PSI07 | 0.52 | RPSI07_RS11730 | | type IV pili twitching motility protein PilT | 0.39 | RPSI07_RS10515 | | cytochrome c | low | > 81 |
Ralstonia solanacearum UW163 | 0.51 | UW163_RS08055 | | type IV pili twitching motility protein PilT | 0.40 | UW163_RS06895 | | cytochrome c | — | — |
Ralstonia solanacearum GMI1000 | 0.51 | RS_RS13430 | | type IV pili twitching motility protein PilT | 0.40 | RS_RS14665 | | cytochrome c | low | > 80 |
Ralstonia solanacearum IBSBF1503 | 0.51 | RALBFv3_RS05570 | | type IV pili twitching motility protein PilT | 0.40 | RALBFv3_RS06720 | | cytochrome c | low | > 76 |
Ralstonia sp. UNC404CL21Col | 0.51 | ABZR87_RS01220 | | type IV pilus twitching motility protein PilT | 0.39 | ABZR87_RS02375 | | cytochrome c1 | low | > 80 |
Dechlorosoma suillum PS | 0.51 | Dsui_0604 | | pilus retraction protein PilT | 0.40 | Dsui_1814 | | cytochrome c1 | — | — |
Cupriavidus basilensis FW507-4G11 | 0.50 | RR42_RS17350 | | twitching motility protein PilT | 0.37 | RR42_RS18815 | | cytochrome C | low | > 128 |
Variovorax sp. OAS795 | 0.49 | ABID97_RS00255 | | type IV pilus twitching motility protein PilT | 0.29 | ABID97_RS22975 | | cytochrome c1 | low | > 91 |
Variovorax sp. SCN45 | 0.49 | GFF3743 | | Twitching motility protein PilT | 0.31 | GFF6696 | | Ubiquinol-cytochrome C reductase, cytochrome C1 subunit | low | > 127 |
Acidovorax sp. GW101-3H11 | 0.48 | Ac3H11_4473 | | Twitching motility protein PilT | 0.32 | Ac3H11_4752 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | — | — |
Herbaspirillum seropedicae SmR1 | 0.46 | HSERO_RS19000 | | twitching motility protein PilT | 0.37 | HSERO_RS20235 | | cytochrome C | low | > 78 |
Hydrogenophaga sp. GW460-11-11-14-LB1 | 0.44 | GFF2721 | | Twitching motility protein PilT | 0.35 | GFF1293 | | ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit | low | > 90 |
Not shown: 32 genomes with orthologs for PP_5093 only; 6 genomes with orthologs for PP_1319 only