Conservation of cofitness between PP_5093 and PP_1319 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_5093 twitching motility protein 1.0 PP_1319 Ubiquinol--cytochrome c reductase, cytochrome c1 0.17 3
Pseudomonas sp. S08-1 0.55 OH686_10970 Twitching motility protein PilT 0.89 OH686_08380 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit
Shewanella amazonensis SB2B 0.55 Sama_2476 twitching motility protein (RefSeq) 0.48 Sama_3019 ubiquinol-cytochrome c reductase cytochrome c1 subunit (RefSeq) low > 62
Marinobacter adhaerens HP15 0.55 HP15_289 twitching motility protein PilT 0.51 HP15_547 ubiquinol-cytochrome c reductase, cytochrome c1
Pseudomonas stutzeri RCH2 0.55 Psest_0285 pilus retraction protein PilT 0.79 Psest_3277 Cytochrome c1
Pseudomonas fluorescens FW300-N2E3 0.55 AO353_08155 twitching motility protein PilT 0.87 AO353_15255 cytochrome C
Shewanella sp. ANA-3 0.54 Shewana3_1195 pilus retraction ATPase PilT (RefSeq) 0.48 Shewana3_0603 cytochrome c1 (RefSeq) low > 73
Vibrio cholerae E7946 ATCC 55056 0.54 CSW01_02460 type IV pili twitching motility protein PilT 0.47 CSW01_03055 cytochrome c1 low > 62
Shewanella loihica PV-4 0.54 Shew_1138 twitching motility protein (RefSeq) 0.45 Shew_0572 cytochrome c1 (RefSeq)
Shewanella oneidensis MR-1 0.54 SO3351 pilT twitching motility protein PilT (NCBI ptt file) 0.48 SO0610 petC ubiquinol-cytochrome c reductase, cytochrome c1 (NCBI ptt file) low > 76
Rhodanobacter denitrificans FW104-10B01 0.54 LRK54_RS04255 type IV pilus twitching motility protein PilT 0.35 LRK54_RS13775 cytochrome c1
Rhodanobacter denitrificans MT42 0.54 LRK55_RS04025 type IV pilus twitching motility protein PilT 0.35 LRK55_RS13490 cytochrome c1
Kangiella aquimarina DSM 16071 0.54 B158DRAFT_0195 pilus retraction protein PilT 0.42 B158DRAFT_2102 Cytochrome c1
Rhodanobacter sp. FW510-T8 0.54 OKGIIK_11130 pilT twitching motility protein PilT 0.35 OKGIIK_03015 cytochrome c1
Pseudomonas fluorescens GW456-L13 0.54 PfGW456L13_1012 Twitching motility protein PilT 0.90 PfGW456L13_1636 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 87
Pseudomonas sp. RS175 0.54 PFR28_04241 Twitching mobility protein 0.90 PFR28_03604 Ammonia monooxygenase gamma subunit
Lysobacter sp. OAE881 0.53 ABIE51_RS16055 type IV pilus twitching motility protein PilT 0.41 ABIE51_RS15430 cytochrome c1 low > 62
Pseudomonas fluorescens FW300-N2E2 0.53 Pf6N2E2_4602 Twitching motility protein PilT 0.89 Pf6N2E2_5339 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 103
Dyella japonica UNC79MFTsu3.2 0.53 ABZR86_RS10420 type IV pilus twitching motility protein PilT 0.37 ABZR86_RS09870 cytochrome c1 low > 74
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2343 Twitching motility protein PilT 0.88 Pf1N1B4_960 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 87
Xanthomonas campestris pv. campestris strain 8004 0.53 Xcc-8004.1713.1 Twitching motility protein PilT 0.40 Xcc-8004.2230.1 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 74
Pseudomonas simiae WCS417 0.53 PS417_26720 twitching motility protein PilT 0.85 PS417_04165 cytochrome C
Alteromonas macleodii MIT1002 0.53 MIT1002_03060 Twitching mobility protein 0.48 MIT1002_00816 Cytochrome c1 precursor low > 70
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.85 PFLU_RS04205 cytochrome c1 low > 109
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_13430 twitching motility protein PilT 0.90 AO356_17075 cytochrome C low > 104
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28365 type IV pilus twitching motility protein PilT 0.85 PFLU_RS04205 cytochrome c1 low > 109
Ralstonia solanacearum PSI07 0.52 RPSI07_RS11730 type IV pili twitching motility protein PilT 0.39 RPSI07_RS10515 cytochrome c low > 81
Ralstonia solanacearum UW163 0.51 UW163_RS08055 type IV pili twitching motility protein PilT 0.40 UW163_RS06895 cytochrome c
Ralstonia solanacearum GMI1000 0.51 RS_RS13430 type IV pili twitching motility protein PilT 0.40 RS_RS14665 cytochrome c low > 80
Ralstonia solanacearum IBSBF1503 0.51 RALBFv3_RS05570 type IV pili twitching motility protein PilT 0.40 RALBFv3_RS06720 cytochrome c low > 76
Ralstonia sp. UNC404CL21Col 0.51 ABZR87_RS01220 type IV pilus twitching motility protein PilT 0.39 ABZR87_RS02375 cytochrome c1 low > 80
Dechlorosoma suillum PS 0.51 Dsui_0604 pilus retraction protein PilT 0.40 Dsui_1814 cytochrome c1
Cupriavidus basilensis FW507-4G11 0.50 RR42_RS17350 twitching motility protein PilT 0.37 RR42_RS18815 cytochrome C low > 128
Variovorax sp. OAS795 0.49 ABID97_RS00255 type IV pilus twitching motility protein PilT 0.29 ABID97_RS22975 cytochrome c1 low > 91
Variovorax sp. SCN45 0.49 GFF3743 Twitching motility protein PilT 0.31 GFF6696 Ubiquinol-cytochrome C reductase, cytochrome C1 subunit low > 127
Acidovorax sp. GW101-3H11 0.48 Ac3H11_4473 Twitching motility protein PilT 0.32 Ac3H11_4752 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS19000 twitching motility protein PilT 0.37 HSERO_RS20235 cytochrome C low > 78
Hydrogenophaga sp. GW460-11-11-14-LB1 0.44 GFF2721 Twitching motility protein PilT 0.35 GFF1293 ubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit low > 90

Not shown: 32 genomes with orthologs for PP_5093 only; 6 genomes with orthologs for PP_1319 only