Conservation of cofitness between PP_0951 and PP_0760 in Pseudomonas putida KT2440

37 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_0951 Ribosome hibernation promoting factor 1.0 PP_0760 conserved membrane protein of unknown function 0.46 17
Pseudomonas simiae WCS417 0.83 PS417_04340 ribosome hibernation promoting factor HPF 0.84 PS417_04520 membrane protein — —
Pseudomonas fluorescens FW300-N1B4 0.81 Pf1N1B4_1081 Ribosome hibernation protein YhbH 0.83 Pf1N1B4_2952 Probable transmembrane protein — —
Pseudomonas fluorescens GW456-L13 0.81 PfGW456L13_5015 Ribosome hibernation protein YhbH 0.80 PfGW456L13_1615 Probable transmembrane protein low > 87
Pseudomonas fluorescens FW300-N2C3 0.81 AO356_07040 hypothetical protein 0.81 AO356_06945 hypothetical protein — —
Pseudomonas fluorescens FW300-N2E2 0.81 Pf6N2E2_3268 Ribosome hibernation protein YhbH 0.81 Pf6N2E2_3248 Probable transmembrane protein low > 103
Pseudomonas fluorescens FW300-N2E3 0.80 AO353_05185 hypothetical protein 0.85 AO353_14990 hypothetical protein low > 101
Pseudomonas sp. RS175 0.80 PFR28_00172 Ribosome hibernation promoting factor 0.80 PFR28_03624 Putative manganese exporter low > 88
Pseudomonas sp. S08-1 0.78 OH686_08550 Ribosome hibernation promoting factor Hpf 0.72 OH686_06355 Putative transmembrane protein — —
Pseudomonas syringae pv. syringae B728a ΔmexB 0.78 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.81 Psyr_0985 Protein of unknown function UPF0016 low > 86
Pseudomonas syringae pv. syringae B728a 0.78 Psyr_4148 sigma 54 modulation protein / SSU ribosomal protein S30P 0.81 Psyr_0985 Protein of unknown function UPF0016 low > 86
Pseudomonas fluorescens SBW25 0.70 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.84 PFLU_RS04565 TMEM165/GDT1 family protein low > 109
Pseudomonas fluorescens SBW25-INTG 0.70 PFLU_RS04395 ribosome-associated translation inhibitor RaiA 0.84 PFLU_RS04565 TMEM165/GDT1 family protein low > 109
Pseudomonas stutzeri RCH2 0.66 Psest_3314 ribosomal subunit interface protein 0.64 Psest_3226 Predicted membrane protein low > 67
Shewanella loihica PV-4 0.63 Shew_3312 sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) 0.51 Shew_3189 hypothetical protein (RefSeq) low > 60
Marinobacter adhaerens HP15 0.62 HP15_2443 sigma 54 modulation protein/ribosomal protein S30EA 0.45 HP15_3823 uncharacterized protein family UPF0016-like protein low > 73
Shewanella amazonensis SB2B 0.60 Sama_3089 ribosomal subunit interface protein (RefSeq) 0.49 Sama_2940 hypothetical protein (RefSeq) low > 62
Shewanella sp. ANA-3 0.59 Shewana3_0671 sigma 54 modulation protein / SSU ribosomal protein S30P (RefSeq) 0.47 Shewana3_0909 hypothetical protein (RefSeq) low > 73
Shewanella oneidensis MR-1 0.58 SO3962 yfiA-3 ribosomal subunit interface protein (NCBI ptt file) 0.46 SO1071 conserved hypothetical protein (NCBI ptt file) low > 76
Dechlorosoma suillum PS 0.52 Dsui_0703 ribosomal subunit interface protein 0.53 Dsui_3069 putative membrane protein low > 51
Vibrio cholerae E7946 ATCC 55056 0.51 CSW01_12820 ribosome hibernation promoting factor 0.51 CSW01_00110 hypothetical protein low > 62
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS02080 ribosome hibernation promoting factor 0.44 RR42_RS33355 membrane protein low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.46 GFF2612 Ribosome hibernation protein YhbH 0.53 GFF5195 Probable transmembrane protein — —
Acidovorax sp. GW101-3H11 0.46 Ac3H11_681 Ribosome hibernation protein YhbH 0.55 Ac3H11_4276 Probable transmembrane protein low > 79
Variovorax sp. SCN45 0.45 GFF7293 Ribosome hibernation promoting factor Hpf 0.50 GFF3266 Putative transmembrane protein low > 127
Variovorax sp. OAS795 0.45 ABID97_RS04490 ribosome-associated translation inhibitor RaiA 0.50 ABID97_RS02605 TMEM165/GDT1 family protein low > 91
Ralstonia solanacearum PSI07 0.44 RPSI07_RS22135 ribosomal subunit interface protein 0.54 RPSI07_RS14145 UPF0016 domain-containing protein — —
Ralstonia solanacearum IBSBF1503 0.43 RALBFv3_RS11165 ribosomal subunit interface protein 0.52 RALBFv3_RS03165 UPF0016 domain-containing protein — —
Ralstonia solanacearum UW163 0.43 UW163_RS02415 ribosomal subunit interface protein 0.52 UW163_RS10560 UPF0016 domain-containing protein — —
Castellaniella sp019104865 MT123 0.43 ABCV34_RS14345 ribosome-associated translation inhibitor RaiA 0.47 ABCV34_RS03705 TMEM165/GDT1 family protein low > 48
Ralstonia solanacearum GMI1000 0.43 RS_RS02015 ribosomal subunit interface protein 0.54 RS_RS10535 UPF0016 domain-containing protein — —
Lysobacter sp. OAE881 0.41 ABIE51_RS15960 ribosome-associated translation inhibitor RaiA 0.49 ABIE51_RS16420 TMEM165/GDT1 family protein low > 62
Burkholderia phytofirmans PsJN 0.41 BPHYT_RS02900 ribosome hibernation promoting factor 0.50 BPHYT_RS10120 membrane protein low > 109
Ralstonia sp. UNC404CL21Col 0.41 ABZR87_RS07055 ribosome-associated translation inhibitor RaiA 0.53 ABZR87_RS15065 TMEM165/GDT1 family protein low > 80
Paraburkholderia graminis OAS925 0.41 ABIE53_000717 putative sigma-54 modulation protein 0.52 ABIE53_003214 putative Ca2+/H+ antiporter (TMEM165/GDT1 family) — —
Paraburkholderia bryophila 376MFSha3.1 0.40 H281DRAFT_01928 sigma 54 modulation protein /SSU ribosomal protein S30P 0.52 H281DRAFT_03986 Putative Ca2+/H+ antiporter, TMEM165/GDT1 family low > 103
Paraburkholderia sabiae LMG 24235 0.39 QEN71_RS01750 ribosome-associated translation inhibitor RaiA 0.52 QEN71_RS03795 TMEM165/GDT1 family protein — —
Acinetobacter radioresistens SK82 0.29 MPMX26_02591 Ribosome hibernation promoting factor 0.44 MPMX26_02923 Putative manganese exporter — —

Not shown: 37 genomes with orthologs for PP_0951 only; 5 genomes with orthologs for PP_0760 only