Conservation of cofitness between PP_2327 and PP_0422 in Pseudomonas putida KT2440

38 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas putida KT2440 1.0 PP_2327 transcriptional dual regulator / CysB-O-acetyl-L-serine 1.0 PP_0422 Indole-3-glycerol phosphate synthase 0.81 17
Pseudomonas fluorescens FW300-N2E3 0.97 AO353_19060 CysB family transcriptional regulator 0.86 AO353_07210 indole-3-glycerol-phosphate synthase 0.64 19
Pseudomonas fluorescens FW300-N2C3 0.97 AO356_03180 CysB family transcriptional regulator 0.87 AO356_14440 indole-3-glycerol-phosphate synthase 0.46 43
Pseudomonas fluorescens FW300-N2E2 0.97 Pf6N2E2_2465 Cys regulon transcriptional activator CysB 0.88 Pf6N2E2_4826 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.76 8
Pseudomonas fluorescens GW456-L13 0.97 PfGW456L13_2230 Cys regulon transcriptional activator CysB 0.87 PfGW456L13_1222 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.79 47
Pseudomonas sp. RS175 0.96 PFR28_00966 HTH-type transcriptional regulator CysB 0.87 PFR28_04043 Indole-3-glycerol phosphate synthase — —
Pseudomonas fluorescens FW300-N1B4 0.96 Pf1N1B4_283 Cys regulon transcriptional activator CysB 0.87 Pf1N1B4_2549 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Pseudomonas fluorescens SBW25-INTG 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC 0.38 29
Pseudomonas fluorescens SBW25 0.96 PFLU_RS08410 HTH-type transcriptional regulator CysB 0.84 PFLU_RS27365 indole-3-glycerol phosphate synthase TrpC low > 109
Pseudomonas simiae WCS417 0.96 PS417_08460 CysB family transcriptional regulator 0.86 PS417_25710 indole-3-glycerol-phosphate synthase — —
Pseudomonas sp. S08-1 0.93 OH686_01730 Cys regulon transcriptional activator CysB 0.81 OH686_15140 Indole-3-glycerol phosphate synthase low > 80
Pseudomonas syringae pv. syringae B728a 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.93 Psyr_2077 regulatory protein, LysR:LysR, substrate-binding protein 0.82 Psyr_4579 indole-3-glycerol phosphate synthase low > 86
Pseudomonas stutzeri RCH2 0.91 Psest_2329 Transcriptional regulator 0.77 Psest_3647 Indole-3-glycerol phosphate synthase 0.66 30
Marinobacter adhaerens HP15 0.80 HP15_1854 transcriptional regulator, LysR family 0.62 HP15_3291 indole-3-glycerol phosphate synthase — —
Dechlorosoma suillum PS 0.52 Dsui_1988 transcriptional regulator 0.51 Dsui_0168 Indole-3-glycerol phosphate synthase — —
Paraburkholderia graminis OAS925 0.49 ABIE53_001994 LysR family cys regulon transcriptional activator 0.50 ABIE53_003643 indole-3-glycerol phosphate synthase — —
Burkholderia phytofirmans PsJN 0.49 BPHYT_RS08810 CysB family transcriptional regulator 0.51 BPHYT_RS17405 indole-3-glycerol phosphate synthase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.49 H281DRAFT_00782 transcriptional regulator, LysR family 0.50 H281DRAFT_05712 indole-3-glycerol phosphate synthase low > 103
Paraburkholderia sabiae LMG 24235 0.48 QEN71_RS22570 CysB family HTH-type transcriptional regulator 0.53 QEN71_RS27565 indole-3-glycerol phosphate synthase TrpC low > 153
Hydrogenophaga sp. GW460-11-11-14-LB1 0.48 GFF5044 Alkanesulfonate utilization operon LysR-family regulator CbI 0.50 GFF3111 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 90
Variovorax sp. SCN45 0.47 GFF3358 Alkanesulfonate utilization operon LysR-family regulator Cbl 0.48 GFF5890 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) — —
Ralstonia sp. UNC404CL21Col 0.47 ABZR87_RS11555 CysB family HTH-type transcriptional regulator 0.49 ABZR87_RS02160 indole-3-glycerol phosphate synthase TrpC 0.32 63
Herbaspirillum seropedicae SmR1 0.47 HSERO_RS08245 CysB family transcriptional regulator 0.45 HSERO_RS19450 indole-3-glycerol-phosphate synthase low > 78
Ralstonia solanacearum PSI07 0.46 RPSI07_RS17385 CysB family HTH-type transcriptional regulator 0.49 RPSI07_RS10735 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00100 CysB family HTH-type transcriptional regulator 0.49 RALBFv3_RS06505 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum UW163 0.46 UW163_RS13430 CysB family HTH-type transcriptional regulator 0.49 UW163_RS07120 indole-3-glycerol phosphate synthase TrpC — —
Ralstonia solanacearum GMI1000 0.46 RS_RS06760 CysB family HTH-type transcriptional regulator 0.49 RS_RS14450 Indole-3-glycerol phosphate synthase 1 — —
Variovorax sp. OAS795 0.46 ABID97_RS02980 CysB family HTH-type transcriptional regulator 0.50 ABID97_RS05280 indole-3-glycerol phosphate synthase TrpC low > 91
Cupriavidus basilensis FW507-4G11 0.45 RR42_RS12245 transcriptional regulator 0.51 RR42_RS18310 indole-3-glycerol-phosphate synthase low > 128
Acidovorax sp. GW101-3H11 0.44 Ac3H11_2403 Alkanesulfonate utilization operon LysR-family regulator CbI 0.49 Ac3H11_772 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) 0.61 45
Acinetobacter radioresistens SK82 0.40 MPMX26_02171 HTH-type transcriptional regulator SsuR 0.49 MPMX26_00983 Indole-3-glycerol phosphate synthase 0.88 28
Castellaniella sp019104865 MT123 0.37 ABCV34_RS08230 CysB family HTH-type transcriptional regulator 0.51 ABCV34_RS10310 indole-3-glycerol phosphate synthase TrpC — —
Dyella japonica UNC79MFTsu3.2 0.37 ABZR86_RS05885 LysR substrate-binding domain-containing protein 0.50 ABZR86_RS12065 indole-3-glycerol phosphate synthase TrpC 0.90 64
Rhodanobacter sp. FW510-T8 0.37 OKGIIK_05975 lysR CysB family transcriptional regulator 0.52 OKGIIK_12280 trpC indole-3-glycerol phosphate synthase TrpC low > 52
Rhodanobacter denitrificans MT42 0.35 LRK55_RS00690 LysR substrate-binding domain-containing protein 0.47 LRK55_RS11300 indole-3-glycerol phosphate synthase TrpC low > 63
Rhodanobacter denitrificans FW104-10B01 0.35 LRK54_RS00915 LysR substrate-binding domain-containing protein 0.48 LRK54_RS11570 indole-3-glycerol phosphate synthase TrpC low > 59
Lysobacter sp. OAE881 0.34 ABIE51_RS15850 LysR family transcriptional regulator 0.53 ABIE51_RS04190 indole-3-glycerol phosphate synthase TrpC low > 62
Xanthomonas campestris pv. campestris strain 8004 0.30 Xcc-8004.1249.1 Transcriptional regulator 0.58 Xcc-8004.622.1 Indole-3-glycerol phosphate synthase (EC 4.1.1.48) low > 74

Not shown: 32 genomes with orthologs for PP_2327 only; 27 genomes with orthologs for PP_0422 only