Conservation of cofitness between OKFHMN_20250 and OKFHMN_17230 in Escherichia coli ECRC100

54 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_20250 relA GTP diphosphokinase 1.0 OKFHMN_17230 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.78 11
Escherichia coli ECOR27 1.00 NOLOHH_12125 relA GTP diphosphokinase 0.99 NOLOHH_09030 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 75
Escherichia coli Nissle 1917 1.00 ECOLIN_RS15515 GTP diphosphokinase 0.99 ECOLIN_RS19240 bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 55
Escherichia coli ECRC99 1.00 KEDOAH_07880 relA GTP diphosphokinase 1.00 KEDOAH_10910 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase — —
Escherichia coli ECRC98 1.00 JDDGAC_23915 relA GTP diphosphokinase 1.00 JDDGAC_20860 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 86
Escherichia coli ECOR38 1.00 HEPCGN_19500 relA GTP diphosphokinase 0.99 HEPCGN_16055 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 87
Escherichia coli BW25113 1.00 b2784 relA (p)ppGpp synthetase I/GTP pyrophosphokinase (NCBI) 1.00 b3359 argD bifunctional acetylornithine aminotransferase/ succinyldiaminopimelate aminotransferase (NCBI) low > 76
Escherichia coli BL21 1.00 ECD_02629 (p)ppGpp synthetase I/GTP pyrophosphokinase 1.00 ECD_03210 bifunctional acetylornithine aminotransferase and succinyldiaminopimelate aminotransferase low > 61
Escherichia coli ECRC101 1.00 MCAODC_10775 relA GTP diphosphokinase 1.00 MCAODC_07760 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_18020 relA GTP diphosphokinase 1.00 NIAGMN_15000 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase — —
Escherichia coli ECRC62 1.00 BNILDI_10630 relA GTP diphosphokinase 0.99 BNILDI_02490 argD,dapC bifunctional acetylornithine/succinyldiaminopimelate transaminase 0.58 11
Escherichia fergusonii Becca 1.00 EFB2_01133 GTP pyrophosphokinase 0.99 EFB2_00463 Acetylornithine/succinyldiaminopimelate aminotransferase low > 86
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_00947 GTP pyrophosphokinase 0.99 OHPLBJKB_00343 Acetylornithine/succinyldiaminopimelate aminotransferase low > 73
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.96 GFF4837 'GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2)' transl_table=11 0.93 GFF3710 Acetylornithine aminotransferase (EC 2.6.1.11) / N-succinyl-L,L-diaminopimelate aminotransferase (EC 2.6.1.17) low > 78
Klebsiella michiganensis M5al 0.94 BWI76_RS22805 GTP diphosphokinase 0.89 BWI76_RS26000 aspartate aminotransferase family protein 0.38 86
Enterobacter asburiae PDN3 0.94 EX28DRAFT_2864 (p)ppGpp synthetase, RelA/SpoT family 0.90 EX28DRAFT_4170 transaminase, acetylornithine/succinylornithine family/succinylornithine transaminase family low > 76
Enterobacter sp. TBS_079 0.93 MPMX20_03653 GTP pyrophosphokinase 0.90 MPMX20_04262 Acetylornithine/succinyldiaminopimelate aminotransferase low > 85
Dickeya dadantii 3937 0.87 DDA3937_RS17015 GTP diphosphokinase 0.78 DDA3937_RS19450 aspartate aminotransferase family protein low > 74
Dickeya dianthicola 67-19 0.87 HGI48_RS17070 GTP diphosphokinase 0.78 HGI48_RS19570 aspartate aminotransferase family protein low > 71
Dickeya dianthicola ME23 0.87 DZA65_RS18145 GTP diphosphokinase 0.78 DZA65_RS20655 aspartate aminotransferase family protein low > 75
Pectobacterium carotovorum WPP14 0.86 HER17_RS04115 GTP diphosphokinase 0.78 HER17_RS01910 aspartate aminotransferase family protein low > 75
Erwinia tracheiphila SCR3 0.86 LU632_RS06350 relA GTP diphosphokinase 0.79 LU632_RS22810 aspartate aminotransferase family protein low > 74
Serratia liquefaciens MT49 0.85 IAI46_03600 GTP diphosphokinase 0.78 IAI46_23590 aspartate aminotransferase family protein low > 86
Rahnella sp. WP5 0.85 EX31_RS07955 GTP diphosphokinase 0.76 EX31_RS04630 aspartate aminotransferase family protein 0.81 71
Pantoea sp. MT58 0.84 IAI47_04120 GTP diphosphokinase 0.80 IAI47_01955 aspartate aminotransferase family protein 0.54 11
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_12405 GTP diphosphokinase 0.63 CSW01_13250 aspartate aminotransferase family protein low > 62
Shewanella sp. ANA-3 0.59 Shewana3_1111 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) 0.64 Shewana3_0610 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) 0.83 42
Shewanella amazonensis SB2B 0.58 Sama_1033 GTP diphosphokinase (RefSeq) 0.65 Sama_3011 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 62
Shewanella oneidensis MR-1 0.58 SO3455 relA GTP pyrophosphokinase (NCBI ptt file) 0.65 SO0617 argD acetylornithine aminotransferase (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.58 Shew_1202 (p)ppGpp synthetase I, SpoT/RelA (RefSeq) 0.65 Shew_0578 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein (RefSeq) low > 60
Alteromonas macleodii MIT1002 0.53 MIT1002_00794 GTP pyrophosphokinase 0.63 MIT1002_00437 Succinylornithine transaminase/acetylornithine aminotransferase low > 70
Pseudomonas sp. RS175 0.47 PFR28_03223 GTP pyrophosphokinase 0.64 PFR28_03283 Succinylornithine transaminase/acetylornithine aminotransferase low > 88
Pseudomonas fluorescens GW456-L13 0.47 PfGW456L13_2035 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.66 PfGW456L13_1971 Succinylornithine transaminase (EC 2.6.1.81) low > 87
Pseudomonas fluorescens FW300-N2C3 0.47 AO356_19060 (p)ppGpp synthetase 0.65 AO356_18725 acetylornithine aminotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.47 Pf6N2E2_5723 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.66 Pf6N2E2_5665 Succinylornithine transaminase (EC 2.6.1.81) low > 103
Pseudomonas sp. S08-1 0.47 OH686_18960 Inactive (p)ppGpp 3'-pyrophosphohydrolase domain / GTP pyrophosphokinase , (p)ppGpp synthetase I 0.67 OH686_21290 Succinylornithine transaminase low > 80
Pseudomonas fluorescens FW300-N2E3 0.47 AO353_02710 (p)ppGpp synthetase 0.64 AO353_03025 acetylornithine aminotransferase low > 101
Pseudomonas fluorescens SBW25-INTG 0.47 PFLU_RS22095 GTP diphosphokinase 0.65 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Pseudomonas fluorescens SBW25 0.47 PFLU_RS22095 GTP diphosphokinase 0.65 PFLU_RS23315 aspartate aminotransferase family protein low > 109
Pseudomonas simiae WCS417 0.47 PS417_20150 (p)ppGpp synthetase 0.65 PS417_21710 Succinylornithine transaminase (EC 2.6.1.81) (from data) — —
Pseudomonas fluorescens FW300-N1B4 0.47 Pf1N1B4_3508 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I / Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase (EC 3.1.7.2) 0.64 Pf1N1B4_3440 Succinylornithine transaminase (EC 2.6.1.81) (from data) low > 87
Pseudomonas syringae pv. syringae B728a 0.47 Psyr_3695 RelA/SpoT protein 0.67 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.47 Psyr_3695 RelA/SpoT protein 0.67 Psyr_3565 succinylornithine aminotransferase apoenzyme / acetylornithine aminotransferase apoenzyme low > 86
Pseudomonas putida KT2440 0.46 PP_1656 ATP:GTP 3'-pyrophosphotransferase 0.67 PP_4481 Succinylornithine transaminase/acetylornithine aminotransferase low > 96
Pseudomonas stutzeri RCH2 0.46 Psest_1640 (p)ppGpp synthetase, RelA/SpoT family 0.64 Psest_2719 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family low > 67
Marinobacter adhaerens HP15 0.45 HP15_791 (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA 0.59 HP15_3042 acetylornithine aminotransferase (EC 2.6.1.11); succinylornithine aminotransferase (EC 2.6.1.81) (from data) low > 73
Kangiella aquimarina DSM 16071 0.43 B158DRAFT_2277 (p)ppGpp synthetase, RelA/SpoT family 0.62 B158DRAFT_2221 acetylornithine and succinylornithine transaminases/succinylornithine transaminase family low > 40
Dyella japonica UNC79MFTsu3.2 0.40 ABZR86_RS19725 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.44 ABZR86_RS17400 acetylornithine transaminase 0.65 2
Dechlorosoma suillum PS 0.37 Dsui_2816 (p)ppGpp synthetase, RelA/SpoT family 0.33 Dsui_3250 acetylornithine/succinylornithine aminotransferase low > 51
Xanthomonas campestris pv. campestris strain 8004 0.36 Xcc-8004.1489.1 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I 0.42 Xcc-8004.1117.1 hypothetical protein low > 74
Lysobacter sp. OAE881 0.34 ABIE51_RS05170 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.46 ABIE51_RS17420 acetylornithine/succinyldiaminopimelate transaminase 0.79 49
Acidovorax sp. GW101-3H11 0.33 Ac3H11_362 GTP pyrophosphokinase (EC 2.7.6.5), (p)ppGpp synthetase I 0.32 Ac3H11_1332 Acetylornithine aminotransferase (EC 2.6.1.11) — —
Bacteroides ovatus ATCC 8483 0.24 BACOVA_02404 RelA/SpoT family protein 0.27 BACOVA_03588 aminotransferase, class III low > 94
Bacteroides thetaiotaomicron VPI-5482 0.24 BT0700 GTP pyrophosphokinase (NCBI ptt file) 0.28 BT3758 N-succinylornithine aminotransferase (EC 2.6.1.81) (from data) 0.53 26
Bacteroides stercoris CC31F 0.23 HMPREF1181_RS16240 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 0.26 HMPREF1181_RS03445 aspartate aminotransferase family protein low > 56

Not shown: 17 genomes with orthologs for OKFHMN_20250 only; 14 genomes with orthologs for OKFHMN_17230 only