Conservation of cofitness between OKFHMN_02265 and OKFHMN_02670 in Escherichia coli ECRC100

51 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC100 1.0 OKFHMN_02265 pgrR DNA-binding transcriptional regulator PgrR 1.0 OKFHMN_02670 trpB tryptophan synthase subunit beta 0.77 6
Escherichia coli ECRC99 1.00 KEDOAH_26505 pgrR DNA-binding transcriptional regulator PgrR 1.00 KEDOAH_26080 trpB tryptophan synthase subunit beta
Escherichia coli ECRC102 1.00 NIAGMN_26435 pgrR DNA-binding transcriptional regulator PgrR 1.00 NIAGMN_26840 trpB tryptophan synthase subunit beta
Escherichia coli ECRC101 1.00 MCAODC_16005 pgrR DNA-binding transcriptional regulator PgrR 1.00 MCAODC_15595 trpB tryptophan synthase subunit beta low > 87
Escherichia coli ECRC98 1.00 JDDGAC_04810 pgrR DNA-binding transcriptional regulator PgrR 1.00 JDDGAC_05215 trpB tryptophan synthase subunit beta low > 86
Escherichia coli BW25113 1.00 b1328 ycjZ predicted DNA-binding transcriptional regulator (NCBI) 1.00 b1261 trpB tryptophan synthase subunit beta (NCBI) low > 76
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02353 HTH-type transcriptional regulator PgrR 1.00 OHPLBJKB_02422 Tryptophan synthase beta chain low > 73
Escherichia coli BL21 1.00 ECD_01306 murein peptide degradation regulator 0.99 ECD_01235 tryptophan synthase, beta subunit
Escherichia coli ECOR27 1.00 NOLOHH_19965 pgrR DNA-binding transcriptional regulator PgrR 1.00 NOLOHH_20330 trpB tryptophan synthase subunit beta low > 75
Escherichia coli ECRC62 1.00 BNILDI_18115 pgrR DNA-binding transcriptional regulator PgrR 1.00 BNILDI_18475 trpB tryptophan synthase subunit beta low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS07975 DNA-binding transcriptional regulator PgrR 1.00 ECOLIN_RS07600 tryptophan synthase subunit beta low > 55
Escherichia fergusonii Becca 0.99 EFB2_02598 HTH-type transcriptional regulator PgrR 1.00 EFB2_02665 Tryptophan synthase beta chain low > 86
Dickeya dadantii 3937 0.68 DDA3937_RS12385 LysR family transcriptional regulator 0.90 DDA3937_RS10465 tryptophan synthase subunit beta low > 74
Dickeya dianthicola ME23 0.68 DZA65_RS07300 LysR family transcriptional regulator 0.90 DZA65_RS10945 tryptophan synthase subunit beta low > 75
Cupriavidus basilensis FW507-4G11 0.67 RR42_RS24200 LysR family transcriptional regulator 0.54 RR42_RS14360 tryptophan synthase subunit alpha low > 128
Dickeya dianthicola 67-19 0.67 HGI48_RS06955 LysR family transcriptional regulator 0.90 HGI48_RS10465 tryptophan synthase subunit beta low > 71
Pseudomonas fluorescens FW300-N2C3 0.53 AO356_24055 LysR family transcriptional regulator 0.52 AO356_10915 tryptophan synthase subunit beta low > 104
Pectobacterium carotovorum WPP14 0.53 HER17_RS06580 LysR family transcriptional regulator 0.91 HER17_RS10935 tryptophan synthase subunit beta low > 75
Sinorhizobium meliloti 1021 0.53 SMa0557 LysR family transcriptional regulator 0.54 SMc02766 tryptophan synthase subunit beta low > 103
Azospirillum sp. SherDot2 0.52 MPMX19_03861 HTH-type transcriptional regulator PgrR 0.51 MPMX19_02736 Tryptophan synthase beta chain low > 112
Rhodanobacter sp. FW510-T8 0.52 OKGIIK_07785 LysR family transcriptional regulator 0.53 OKGIIK_04845 trpB tryptophan synthase subunit beta low > 52
Enterobacter asburiae PDN3 0.52 EX28DRAFT_1046 Transcriptional regulator 0.95 EX28DRAFT_0933 tryptophan synthase, beta subunit low > 76
Escherichia coli ECOR38 0.51 HEPCGN_07680 lysR LysR family transcriptional regulator 1.00 HEPCGN_25520 trpB tryptophan synthase subunit beta low > 87
Ralstonia solanacearum GMI1000 0.51 RS_RS24215 LysR family transcriptional regulator 0.53 RS_RS09965 tryptophan synthase subunit beta low > 80
Pseudomonas fluorescens FW300-N1B4 0.51 Pf1N1B4_4966 Transcriptional regulator, LysR family 0.53 Pf1N1B4_1831 Tryptophan synthase beta chain (EC 4.2.1.20) low > 87
Azospirillum brasilense Sp245 0.51 AZOBR_RS30040 transcriptional regulator 0.51 AZOBR_RS00525 tryptophan synthase subunit beta low > 97
Pseudomonas sp. RS175 0.51 PFR28_02305 HTH-type transcriptional regulator PgrR 0.52 PFR28_04715 Tryptophan synthase beta chain
Ralstonia solanacearum PSI07 0.51 RPSI07_RS06445 LysR family transcriptional regulator 0.53 RPSI07_RS14730 tryptophan synthase subunit beta low > 81
Ralstonia solanacearum IBSBF1503 0.50 RALBFv3_RS17155 LysR family transcriptional regulator 0.54 RALBFv3_RS02585 tryptophan synthase subunit beta
Variovorax sp. SCN45 0.50 GFF907 Transcriptional regulator, LysR family 0.52 GFF3883 Tryptophan synthase beta chain (EC 4.2.1.20)
Rahnella sp. WP5 0.50 EX31_RS20830 LysR family transcriptional regulator 0.89 EX31_RS09975 tryptophan synthase subunit beta low > 89
Serratia liquefaciens MT49 0.50 IAI46_12365 LysR family transcriptional regulator 0.91 IAI46_14040 tryptophan synthase subunit beta low > 86
Klebsiella michiganensis M5al 0.49 BWI76_RS18485 LysR family transcriptional regulator 0.95 BWI76_RS11845 tryptophan synthase subunit beta low > 92
Variovorax sp. OAS795 0.49 ABID97_RS29425 LysR family transcriptional regulator 0.52 ABID97_RS08430 tryptophan synthase subunit beta low > 91
Enterobacter sp. TBS_079 0.49 MPMX20_02525 HTH-type transcriptional regulator PgrR 0.96 MPMX20_02513 Tryptophan synthase beta chain low > 85
Dyella japonica UNC79MFTsu3.2 0.49 ABZR86_RS17790 LysR family transcriptional regulator 0.54 ABZR86_RS08000 tryptophan synthase subunit beta low > 74
Paraburkholderia graminis OAS925 0.49 ABIE53_002125 DNA-binding transcriptional LysR family regulator 0.53 ABIE53_004809 tryptophan synthase beta chain
Xanthomonas campestris pv. campestris strain 8004 0.48 Xcc-8004.365.1 Transcriptional regulator, LysR family 0.52 Xcc-8004.1964.1 Tryptophan synthase beta chain (EC 4.2.1.20) low > 74
Pseudomonas syringae pv. syringae B728a ΔmexB 0.48 Psyr_3801 transcriptional regulator, LysR family 0.53 Psyr_0034 tryptophan synthase, beta chain low > 86
Pseudomonas syringae pv. syringae B728a 0.48 Psyr_3801 transcriptional regulator, LysR family 0.53 Psyr_0034 tryptophan synthase, beta chain low > 86
Paraburkholderia bryophila 376MFSha3.1 0.48 H281DRAFT_02686 transcriptional regulator, LysR family 0.53 H281DRAFT_06067 tryptophan synthase, beta chain low > 103
Burkholderia phytofirmans PsJN 0.47 BPHYT_RS28355 LysR family transcriptional regulator 0.53 BPHYT_RS33875 tryptophan synthase subunit alpha
Bosea sp. OAE506 0.46 ABIE41_RS16645 LysR family transcriptional regulator 0.52 ABIE41_RS04270 tryptophan synthase subunit beta
Pseudomonas fluorescens FW300-N2E2 0.45 Pf6N2E2_1914 Transcriptional regulator, LysR family 0.52 Pf6N2E2_4048 Tryptophan synthase beta chain (EC 4.2.1.20) low > 103
Sphingomonas koreensis DSMZ 15582 0.42 Ga0059261_2136 Transcriptional regulator 0.54 Ga0059261_0238 tryptophan synthase, beta subunit
Pantoea sp. MT58 0.39 IAI47_21445 LysR family transcriptional regulator 0.89 IAI47_09170 tryptophan synthase subunit beta low > 76
Lysobacter sp. OAE881 0.38 ABIE51_RS02430 LysR family transcriptional regulator 0.52 ABIE51_RS08260 tryptophan synthase subunit beta low > 62
Agrobacterium fabrum C58 0.38 Atu0261 transcriptional regulator, LysR family 0.52 Atu0018 tryptophan synthase beta subunit
Ralstonia solanacearum UW163 0.37 UW163_RS23075 LysR family transcriptional regulator 0.54 UW163_RS11140 tryptophan synthase subunit beta
Herbaspirillum seropedicae SmR1 0.37 HSERO_RS21720 transcriptional regulator 0.49 HSERO_RS16475 tryptophan synthase subunit alpha low > 78
Rhodospirillum rubrum S1H 0.33 Rru_A1060 Transcriptional Regulator, LysR family (NCBI) 0.53 Rru_A3427 Tryptophan synthase, beta chain (NCBI) low > 58
Ralstonia sp. UNC404CL21Col 0.32 ABZR87_RS22720 LysR family transcriptional regulator 0.53 ABZR87_RS14500 tryptophan synthase subunit beta low > 80

Not shown: 0 genomes with orthologs for OKFHMN_02265 only; 50 genomes with orthologs for OKFHMN_02670 only