Organism | Ratio1 | Gene1 | Name1 | Description1 | Ratio2 | Gene2 | Name2 | Description2 | Cofit | Rank |
Escherichia coli ECRC100 | 1.0 | OKFHMN_02265 | pgrR | DNA-binding transcriptional regulator PgrR | 1.0 | OKFHMN_02670 | trpB | tryptophan synthase subunit beta | 0.77 | 6 |
Escherichia coli ECRC99 | 1.00 | KEDOAH_26505 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | KEDOAH_26080 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC102 | 1.00 | NIAGMN_26435 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | NIAGMN_26840 | trpB | tryptophan synthase subunit beta | — | — |
Escherichia coli ECRC101 | 1.00 | MCAODC_16005 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | MCAODC_15595 | trpB | tryptophan synthase subunit beta | low | > 87 |
Escherichia coli ECRC98 | 1.00 | JDDGAC_04810 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | JDDGAC_05215 | trpB | tryptophan synthase subunit beta | low | > 86 |
Escherichia coli BW25113 | 1.00 | b1328 | ycjZ | predicted DNA-binding transcriptional regulator (NCBI) | 1.00 | b1261 | trpB | tryptophan synthase subunit beta (NCBI) | low | > 76 |
Escherichia coli HS(pFamp)R (ATCC 700891) | 1.00 | OHPLBJKB_02353 | | HTH-type transcriptional regulator PgrR | 1.00 | OHPLBJKB_02422 | | Tryptophan synthase beta chain | low | > 73 |
Escherichia coli BL21 | 1.00 | ECD_01306 | | murein peptide degradation regulator | 0.99 | ECD_01235 | | tryptophan synthase, beta subunit | — | — |
Escherichia coli ECOR27 | 1.00 | NOLOHH_19965 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | NOLOHH_20330 | trpB | tryptophan synthase subunit beta | low | > 75 |
Escherichia coli ECRC62 | 1.00 | BNILDI_18115 | pgrR | DNA-binding transcriptional regulator PgrR | 1.00 | BNILDI_18475 | trpB | tryptophan synthase subunit beta | low | > 75 |
Escherichia coli Nissle 1917 | 0.99 | ECOLIN_RS07975 | | DNA-binding transcriptional regulator PgrR | 1.00 | ECOLIN_RS07600 | | tryptophan synthase subunit beta | low | > 55 |
Escherichia fergusonii Becca | 0.99 | EFB2_02598 | | HTH-type transcriptional regulator PgrR | 1.00 | EFB2_02665 | | Tryptophan synthase beta chain | low | > 86 |
Dickeya dadantii 3937 | 0.68 | DDA3937_RS12385 | | LysR family transcriptional regulator | 0.90 | DDA3937_RS10465 | | tryptophan synthase subunit beta | low | > 74 |
Dickeya dianthicola ME23 | 0.68 | DZA65_RS07300 | | LysR family transcriptional regulator | 0.90 | DZA65_RS10945 | | tryptophan synthase subunit beta | low | > 75 |
Cupriavidus basilensis FW507-4G11 | 0.67 | RR42_RS24200 | | LysR family transcriptional regulator | 0.54 | RR42_RS14360 | | tryptophan synthase subunit alpha | low | > 128 |
Dickeya dianthicola 67-19 | 0.67 | HGI48_RS06955 | | LysR family transcriptional regulator | 0.90 | HGI48_RS10465 | | tryptophan synthase subunit beta | low | > 71 |
Pseudomonas fluorescens FW300-N2C3 | 0.53 | AO356_24055 | | LysR family transcriptional regulator | 0.52 | AO356_10915 | | tryptophan synthase subunit beta | low | > 104 |
Pectobacterium carotovorum WPP14 | 0.53 | HER17_RS06580 | | LysR family transcriptional regulator | 0.91 | HER17_RS10935 | | tryptophan synthase subunit beta | low | > 75 |
Sinorhizobium meliloti 1021 | 0.53 | SMa0557 | | LysR family transcriptional regulator | 0.54 | SMc02766 | | tryptophan synthase subunit beta | low | > 103 |
Azospirillum sp. SherDot2 | 0.52 | MPMX19_03861 | | HTH-type transcriptional regulator PgrR | 0.51 | MPMX19_02736 | | Tryptophan synthase beta chain | low | > 112 |
Rhodanobacter sp. FW510-T8 | 0.52 | OKGIIK_07785 | | LysR family transcriptional regulator | 0.53 | OKGIIK_04845 | trpB | tryptophan synthase subunit beta | low | > 52 |
Enterobacter asburiae PDN3 | 0.52 | EX28DRAFT_1046 | | Transcriptional regulator | 0.95 | EX28DRAFT_0933 | | tryptophan synthase, beta subunit | low | > 76 |
Escherichia coli ECOR38 | 0.51 | HEPCGN_07680 | lysR | LysR family transcriptional regulator | 1.00 | HEPCGN_25520 | trpB | tryptophan synthase subunit beta | low | > 87 |
Ralstonia solanacearum GMI1000 | 0.51 | RS_RS24215 | | LysR family transcriptional regulator | 0.53 | RS_RS09965 | | tryptophan synthase subunit beta | low | > 80 |
Pseudomonas fluorescens FW300-N1B4 | 0.51 | Pf1N1B4_4966 | | Transcriptional regulator, LysR family | 0.53 | Pf1N1B4_1831 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 87 |
Azospirillum brasilense Sp245 | 0.51 | AZOBR_RS30040 | | transcriptional regulator | 0.51 | AZOBR_RS00525 | | tryptophan synthase subunit beta | low | > 97 |
Pseudomonas sp. RS175 | 0.51 | PFR28_02305 | | HTH-type transcriptional regulator PgrR | 0.52 | PFR28_04715 | | Tryptophan synthase beta chain | — | — |
Ralstonia solanacearum PSI07 | 0.51 | RPSI07_RS06445 | | LysR family transcriptional regulator | 0.53 | RPSI07_RS14730 | | tryptophan synthase subunit beta | low | > 81 |
Ralstonia solanacearum IBSBF1503 | 0.50 | RALBFv3_RS17155 | | LysR family transcriptional regulator | 0.54 | RALBFv3_RS02585 | | tryptophan synthase subunit beta | — | — |
Variovorax sp. SCN45 | 0.50 | GFF907 | | Transcriptional regulator, LysR family | 0.52 | GFF3883 | | Tryptophan synthase beta chain (EC 4.2.1.20) | — | — |
Rahnella sp. WP5 | 0.50 | EX31_RS20830 | | LysR family transcriptional regulator | 0.89 | EX31_RS09975 | | tryptophan synthase subunit beta | low | > 89 |
Serratia liquefaciens MT49 | 0.50 | IAI46_12365 | | LysR family transcriptional regulator | 0.91 | IAI46_14040 | | tryptophan synthase subunit beta | low | > 86 |
Klebsiella michiganensis M5al | 0.49 | BWI76_RS18485 | | LysR family transcriptional regulator | 0.95 | BWI76_RS11845 | | tryptophan synthase subunit beta | low | > 92 |
Variovorax sp. OAS795 | 0.49 | ABID97_RS29425 | | LysR family transcriptional regulator | 0.52 | ABID97_RS08430 | | tryptophan synthase subunit beta | low | > 91 |
Enterobacter sp. TBS_079 | 0.49 | MPMX20_02525 | | HTH-type transcriptional regulator PgrR | 0.96 | MPMX20_02513 | | Tryptophan synthase beta chain | low | > 85 |
Dyella japonica UNC79MFTsu3.2 | 0.49 | ABZR86_RS17790 | | LysR family transcriptional regulator | 0.54 | ABZR86_RS08000 | | tryptophan synthase subunit beta | low | > 74 |
Paraburkholderia graminis OAS925 | 0.49 | ABIE53_002125 | | DNA-binding transcriptional LysR family regulator | 0.53 | ABIE53_004809 | | tryptophan synthase beta chain | — | — |
Xanthomonas campestris pv. campestris strain 8004 | 0.48 | Xcc-8004.365.1 | | Transcriptional regulator, LysR family | 0.52 | Xcc-8004.1964.1 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 74 |
Pseudomonas syringae pv. syringae B728a ΔmexB | 0.48 | Psyr_3801 | | transcriptional regulator, LysR family | 0.53 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
Pseudomonas syringae pv. syringae B728a | 0.48 | Psyr_3801 | | transcriptional regulator, LysR family | 0.53 | Psyr_0034 | | tryptophan synthase, beta chain | low | > 86 |
Paraburkholderia bryophila 376MFSha3.1 | 0.48 | H281DRAFT_02686 | | transcriptional regulator, LysR family | 0.53 | H281DRAFT_06067 | | tryptophan synthase, beta chain | low | > 103 |
Burkholderia phytofirmans PsJN | 0.47 | BPHYT_RS28355 | | LysR family transcriptional regulator | 0.53 | BPHYT_RS33875 | | tryptophan synthase subunit alpha | — | — |
Bosea sp. OAE506 | 0.46 | ABIE41_RS16645 | | LysR family transcriptional regulator | 0.52 | ABIE41_RS04270 | | tryptophan synthase subunit beta | — | — |
Pseudomonas fluorescens FW300-N2E2 | 0.45 | Pf6N2E2_1914 | | Transcriptional regulator, LysR family | 0.52 | Pf6N2E2_4048 | | Tryptophan synthase beta chain (EC 4.2.1.20) | low | > 103 |
Sphingomonas koreensis DSMZ 15582 | 0.42 | Ga0059261_2136 | | Transcriptional regulator | 0.54 | Ga0059261_0238 | | tryptophan synthase, beta subunit | — | — |
Pantoea sp. MT58 | 0.39 | IAI47_21445 | | LysR family transcriptional regulator | 0.89 | IAI47_09170 | | tryptophan synthase subunit beta | low | > 76 |
Lysobacter sp. OAE881 | 0.38 | ABIE51_RS02430 | | LysR family transcriptional regulator | 0.52 | ABIE51_RS08260 | | tryptophan synthase subunit beta | low | > 62 |
Agrobacterium fabrum C58 | 0.38 | Atu0261 | | transcriptional regulator, LysR family | 0.52 | Atu0018 | | tryptophan synthase beta subunit | — | — |
Ralstonia solanacearum UW163 | 0.37 | UW163_RS23075 | | LysR family transcriptional regulator | 0.54 | UW163_RS11140 | | tryptophan synthase subunit beta | — | — |
Herbaspirillum seropedicae SmR1 | 0.37 | HSERO_RS21720 | | transcriptional regulator | 0.49 | HSERO_RS16475 | | tryptophan synthase subunit alpha | low | > 78 |
Rhodospirillum rubrum S1H | 0.33 | Rru_A1060 | | Transcriptional Regulator, LysR family (NCBI) | 0.53 | Rru_A3427 | | Tryptophan synthase, beta chain (NCBI) | low | > 58 |
Ralstonia sp. UNC404CL21Col | 0.32 | ABZR87_RS22720 | | LysR family transcriptional regulator | 0.53 | ABZR87_RS14500 | | tryptophan synthase subunit beta | low | > 80 |
Not shown: 0 genomes with orthologs for OKFHMN_02265 only; 50 genomes with orthologs for OKFHMN_02670 only