Conservation of cofitness between OH686_10355 and OH686_06325 in Pseudomonas sp. S08-1

40 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pseudomonas sp. S08-1 1.0 OH686_10355 biotin synthase 1.0 OH686_06325 Medium-chain-fatty-acid--CoA ligase 0.91 19
Pseudomonas stutzeri RCH2 0.94 Psest_0411 biotin synthetase 0.73 Psest_3221 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 67
Pseudomonas putida KT2440 0.93 PP_0362 Biotin synthase 0.83 PP_0763 Medium-chain-fatty-acid CoA ligase low > 96
Pseudomonas sp. RS175 0.91 PFR28_04103 Biotin synthase 0.83 PFR28_03620 Long-chain-fatty-acid--CoA ligase low > 88
Pseudomonas fluorescens GW456-L13 0.90 PfGW456L13_1147 Biotin synthase (EC 2.8.1.6) 0.82 PfGW456L13_1619 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 87
Pseudomonas fluorescens FW300-N1B4 0.90 Pf1N1B4_2487 Biotin synthase (EC 2.8.1.6) 0.62 Pf1N1B4_5982 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 87
Pseudomonas fluorescens FW300-N2E2 0.90 Pf6N2E2_4759 Biotin synthase (EC 2.8.1.6) 0.83 Pf6N2E2_3244 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 103
Pseudomonas fluorescens FW300-N2C3 0.90 AO356_14135 biotin synthase 0.82 AO356_06910 long-chain fatty acid--CoA ligase low > 104
Pseudomonas fluorescens FW300-N2E3 0.90 AO353_07525 biotin synthase 0.82 AO353_15010 long-chain fatty acid--CoA ligase low > 101
Pseudomonas fluorescens SBW25 0.90 PFLU_RS27650 biotin synthase BioB 0.82 PFLU_RS04585 fatty acid--CoA ligase low > 109
Pseudomonas fluorescens SBW25-INTG 0.90 PFLU_RS27650 biotin synthase BioB 0.82 PFLU_RS04585 fatty acid--CoA ligase low > 109
Pseudomonas simiae WCS417 0.89 PS417_26005 biotin synthase 0.82 PS417_04540 long-chain fatty acid--CoA ligase low > 88
Pseudomonas syringae pv. syringae B728a ΔmexB 0.89 Psyr_4687 biotin synthase 0.80 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Pseudomonas syringae pv. syringae B728a 0.89 Psyr_4687 biotin synthase 0.80 Psyr_0990 AMP-dependent synthetase and ligase low > 86
Marinobacter adhaerens HP15 0.69 HP15_2486 biotin synthase 0.58 HP15_2595 acyl-CoA synthetase low > 73
Ralstonia solanacearum GMI1000 0.61 RS_RS01305 biotin synthase 0.30 RS_RS08835 long-chain-fatty-acid--CoA ligase low > 80
Ralstonia sp. UNC404CL21Col 0.61 ABZR87_RS06265 biotin synthase BioB 0.30 ABZR87_RS12625 3-(methylthio)propionyl-CoA ligase low > 80
Ralstonia solanacearum PSI07 0.61 RPSI07_RS22850 biotin synthase BioB 0.30 RPSI07_RS16300 long-chain-fatty-acid--CoA ligase low > 81
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS10465 biotin synthase BioB 0.30 RALBFv3_RS01175 long-chain-fatty-acid--CoA ligase low > 76
Ralstonia solanacearum UW163 0.60 UW163_RS03115 biotin synthase BioB 0.30 UW163_RS14485 long-chain-fatty-acid--CoA ligase — —
Magnetospirillum magneticum AMB-1 0.59 AMB_RS13865 biotin synthase 0.22 AMB_RS13240 acyl-CoA synthetase — —
Paraburkholderia sabiae LMG 24235 0.59 QEN71_RS01085 biotin synthase BioB 0.48 QEN71_RS30315 fatty acid--CoA ligase — —
Paraburkholderia graminis OAS925 0.58 ABIE53_000577 biotin synthase 0.29 ABIE53_002150 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II low > 113
Acinetobacter radioresistens SK82 0.58 MPMX26_01785 Biotin synthase 0.23 MPMX26_00552 Long-chain-fatty-acid--CoA ligase low > 36
Burkholderia phytofirmans PsJN 0.58 BPHYT_RS02150 biotin synthase 0.28 BPHYT_RS09555 long-chain fatty acid--CoA ligase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.58 H281DRAFT_02097 biotin synthase 0.31 H281DRAFT_02538 fatty-acyl-CoA synthase low > 103
Cupriavidus basilensis FW507-4G11 0.57 RR42_RS00940 biotin synthase 0.47 RR42_RS25570 long-chain fatty acid--CoA ligase 0.47 37
Hydrogenophaga sp. GW460-11-11-14-LB1 0.55 GFF3992 Biotin synthase (EC 2.8.1.6) 0.32 GFF3470 Medium-chain-fatty-acid--CoA ligase (EC 6.2.1.-) low > 90
Rhodopseudomonas palustris CGA009 0.55 TX73_010535 biotin synthase BioB 0.28 TX73_023060 fatty-acid--CoA ligase low > 86
Castellaniella sp019104865 MT123 0.54 ABCV34_RS15280 biotin synthase BioB 0.21 ABCV34_RS02975 acyl-CoA synthetase 0.49 6
Sphingomonas koreensis DSMZ 15582 0.54 Ga0059261_3989 biotin synthase (EC 2.8.1.6) 0.26 Ga0059261_0337 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II low > 68
Caulobacter crescentus NA1000 Δfur 0.54 CCNA_03636 biotin synthase 0.29 CCNA_00192 long-chain-fatty-acid--CoA ligase low > 67
Caulobacter crescentus NA1000 0.54 CCNA_03636 biotin synthase 0.29 CCNA_00192 long-chain-fatty-acid--CoA ligase low > 66
Phaeobacter inhibens DSM 17395 0.53 PGA1_c09120 biotin synthase BioB 0.45 PGA1_c22760 medium-chain-fatty-acid--CoA ligase AlkK low > 62
Dechlorosoma suillum PS 0.53 Dsui_1297 biotin synthetase 0.49 Dsui_0644 acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II low > 51
Acidovorax sp. GW101-3H11 0.53 Ac3H11_2272 Biotin synthase (EC 2.8.1.6) 0.30 Ac3H11_2529 3-methylmercaptopropionyl-CoA ligase (DmdB) low > 79
Variovorax sp. OAS795 0.53 ABID97_RS13955 biotin synthase BioB 0.29 ABID97_RS15705 3-(methylthio)propionyl-CoA ligase low > 91
Variovorax sp. SCN45 0.52 GFF937 Biotin synthase (EC 2.8.1.6) 0.32 GFF4863 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) low > 127
Herbaspirillum seropedicae SmR1 0.51 HSERO_RS12235 biotin synthase 0.49 HSERO_RS07975 AMP-binding protein low > 78
Pontibacter actiniarum KMM 6156, DSM 19842 0.48 CA264_02425 biotin synthase BioB 0.50 CA264_15870 long-chain fatty acid--CoA ligase low > 74
Mycobacterium tuberculosis H37Rv 0.26 Rv1589 Probable biotin synthetase BioB 0.30 Rv1058 Probable medium chain fatty-acid-CoA ligase FadD14 (fatty-acid-CoA synthetase) (fatty-acid-CoA synthase) 0.43 31

Not shown: 51 genomes with orthologs for OH686_10355 only; 6 genomes with orthologs for OH686_06325 only