Conservation of cofitness between NOLOHH_20995 and NOLOHH_11890 in Escherichia coli ECOR27

59 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECOR27 1.0 NOLOHH_20995 mfd transcription-repair coupling factor 1.0 NOLOHH_11890 ptsP phosphoenolpyruvate--protein phosphotransferase low > 75
Escherichia coli ECRC62 1.00 BNILDI_19160 mfd transcription-repair coupling factor 1.00 BNILDI_10370 ptsP phosphoenolpyruvate--protein phosphotransferase 0.95 3
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_02552 Transcription-repair-coupling factor 1.00 OHPLBJKB_00901 Phosphoenolpyruvate-dependent phosphotransferase system low > 73
Escherichia coli ECRC100 1.00 OKFHMN_03470 mfd transcription-repair coupling factor 1.00 OKFHMN_20005 ptsP phosphoenolpyruvate--protein phosphotransferase low > 80
Escherichia coli ECRC101 1.00 MCAODC_22830 mfd transcription-repair coupling factor 1.00 MCAODC_10530 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli ECRC102 1.00 NIAGMN_24360 mfd transcription-repair coupling factor 1.00 NIAGMN_17775 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia coli ECRC99 1.00 KEDOAH_24285 mfd transcription-repair coupling factor 1.00 KEDOAH_08125 ptsP phosphoenolpyruvate--protein phosphotransferase — —
Escherichia fergusonii Becca 1.00 EFB2_02861 Transcription-repair-coupling factor 1.00 EFB2_01055 Phosphoenolpyruvate-dependent phosphotransferase system low > 86
Escherichia coli ECRC98 1.00 JDDGAC_07130 mfd transcription-repair coupling factor 1.00 JDDGAC_23670 ptsP phosphoenolpyruvate--protein phosphotransferase 0.93 32
Escherichia coli ECOR38 1.00 HEPCGN_24015 mfd transcription-repair coupling factor 1.00 HEPCGN_19260 ptsP phosphoenolpyruvate--protein phosphotransferase low > 87
Escherichia coli BW25113 0.98 b1114 mfd transcription-repair coupling factor (NCBI) 1.00 b2829 ptsP fused PTS enzyme: PEP-protein phosphotransferase (enzyme I)/GAF domain containing protein (NCBI) low > 76
Escherichia coli BL21 0.98 ECD_01110 transcription-repair coupling factor 1.00 ECD_02677 PEP-protein phosphotransferase enzyme I; GAF domain containing protein low > 61
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF3397 Transcription-repair coupling factor 0.96 GFF1311 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated 0.95 4
Klebsiella michiganensis M5al 0.92 BWI76_RS11205 transcription-repair coupling factor 0.89 BWI76_RS23270 phosphoenolpyruvate--protein phosphotransferase PtsP low > 92
Enterobacter asburiae PDN3 0.91 EX28DRAFT_1816 transcription-repair coupling factor (mfd) 0.94 EX28DRAFT_2904 phosphoenolpyruvate-protein phosphotransferase low > 76
Enterobacter sp. TBS_079 0.91 MPMX20_01795 Transcription-repair-coupling factor 0.94 MPMX20_03692 Phosphoenolpyruvate-dependent phosphotransferase system low > 85
Pectobacterium carotovorum WPP14 0.83 HER17_RS08775 transcription-repair coupling factor 0.74 HER17_RS16580 phosphoenolpyruvate--protein phosphotransferase low > 75
Erwinia tracheiphila SCR3 0.83 LU632_RS14730 mfd transcription-repair coupling factor 0.81 LU632_RS06110 ptsP phosphoenolpyruvate--protein phosphotransferase low > 74
Pantoea sp. MT58 0.82 IAI47_11975 transcription-repair coupling factor 0.80 IAI47_03920 phosphoenolpyruvate--protein phosphotransferase low > 76
Serratia liquefaciens MT49 0.81 IAI46_10320 transcription-repair coupling factor 0.84 IAI46_20450 phosphoenolpyruvate--protein phosphotransferase low > 86
Dickeya dadantii 3937 0.81 DDA3937_RS13000 transcription-repair coupling factor 0.74 DDA3937_RS04950 phosphoenolpyruvate--protein phosphotransferase low > 74
Rahnella sp. WP5 0.81 EX31_RS24520 transcription-repair coupling factor 0.79 EX31_RS13200 phosphoenolpyruvate--protein phosphotransferase low > 89
Dickeya dianthicola 67-19 0.80 HGI48_RS13065 transcription-repair coupling factor 0.73 HGI48_RS04960 phosphoenolpyruvate--protein phosphotransferase low > 71
Dickeya dianthicola ME23 0.80 DZA65_RS13530 transcription-repair coupling factor 0.73 DZA65_RS05300 phosphoenolpyruvate--protein phosphotransferase low > 75
Vibrio cholerae E7946 ATCC 55056 0.64 CSW01_09445 transcription-repair coupling factor 0.49 CSW01_03525 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62
Alteromonas macleodii MIT1002 0.57 MIT1002_01646 Transcription-repair-coupling factor 0.41 MIT1002_00648 Phosphoenolpyruvate-protein phosphotransferase low > 70
Shewanella loihica PV-4 0.55 Shew_1630 transcription-repair coupling factor (RefSeq) 0.38 Shew_1039 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 60
Shewanella oneidensis MR-1 0.55 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) 0.40 SO1332 ptsP phosphoenolpyruvate-protein phosphotransferase PtsP (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.55 Shewana3_2289 transcription-repair coupling factor (RefSeq) 0.40 Shewana3_3042 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 73
Shewanella amazonensis SB2B 0.54 Sama_1330 transcription-repair coupling factor (RefSeq) 0.39 Sama_0864 phosphoenolpyruvate-protein phosphotransferase PtsP (RefSeq) low > 62
Pseudomonas stutzeri RCH2 0.54 Psest_1653 transcription-repair coupling factor (mfd) 0.40 Psest_3862 phosphoenolpyruvate-protein phosphotransferase low > 67
Pseudomonas sp. S08-1 0.53 OH686_21990 transcription-repair coupling factor 0.40 OH686_11430 Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 80
Pseudomonas syringae pv. syringae B728a ΔmexB 0.53 Psyr_1896 transcription-repair coupling factor 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas syringae pv. syringae B728a 0.53 Psyr_1896 transcription-repair coupling factor 0.39 Psyr_4842 Phosphoenolpyruvate-protein phosphotransferase low > 86
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_00435 transcription-repair coupling factor 0.39 AO353_08465 phosphoenolpyruvate-protein phosphotransferase low > 101
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_4027 Transcription-repair coupling factor 0.39 PfGW456L13_953 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens FW300-N1B4 0.52 Pf1N1B4_3916 Transcription-repair coupling factor 0.39 Pf1N1B4_2284 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 87
Pseudomonas fluorescens FW300-N2C3 0.52 AO356_02270 transcription-repair coupling factor 0.39 AO356_10350 phosphoenolpyruvate-protein phosphotransferase low > 104
Pseudomonas fluorescens FW300-N2E2 0.52 Pf6N2E2_2278 Transcription-repair coupling factor 0.39 Pf6N2E2_3942 FIG001592: Phosphocarrier protein kinase/phosphorylase, nitrogen regulation associated low > 103
Pseudomonas fluorescens SBW25-INTG 0.52 PFLU_RS07710 transcription-repair coupling factor 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas fluorescens SBW25 0.52 PFLU_RS07710 transcription-repair coupling factor 0.39 PFLU_RS28645 phosphoenolpyruvate--protein phosphotransferase low > 109
Pseudomonas simiae WCS417 0.52 PS417_07635 transcription-repair coupling factor 0.39 PS417_26985 phosphoenolpyruvate-protein phosphotransferase low > 88
Pseudomonas sp. RS175 0.52 PFR28_01123 Transcription-repair-coupling factor 0.39 PFR28_04830 Phosphoenolpyruvate-dependent phosphotransferase system 0.37 22
Pseudomonas putida KT2440 0.52 PP_2148 transcription-repair coupling factor 0.39 PP_5145 phosphoenolpyruvate-dependent regulator (with NPR and NTR proteins) 0.43 86
Marinobacter adhaerens HP15 0.51 HP15_2257 transcription-repair-coupling factor 0.41 HP15_463 fused phosphoenolpyruvate-protein phosphotransferase PtsP/GAF domain protein low > 73
Acinetobacter radioresistens SK82 0.47 MPMX26_01319 Transcription-repair-coupling factor 0.35 MPMX26_00341 Phosphoenolpyruvate-dependent phosphotransferase system 0.56 13
Magnetospirillum magneticum AMB-1 0.33 AMB_RS12390 transcription-repair coupling factor 0.25 AMB_RS08150 phosphoenolpyruvate--protein phosphotransferase low > 64
Rhodopseudomonas palustris CGA009 0.33 TX73_013805 transcription-repair coupling factor 0.26 TX73_003130 phosphoenolpyruvate--protein phosphotransferase low > 86
Brevundimonas sp. GW460-12-10-14-LB2 0.32 A4249_RS04775 transcription-repair coupling factor 0.24 A4249_RS14485 phosphoenolpyruvate--protein phosphotransferase low > 48
Azospirillum sp. SherDot2 0.32 MPMX19_00876 Transcription-repair-coupling factor 0.24 MPMX19_02675 Phosphoenolpyruvate-dependent phosphotransferase system low > 112
Bosea sp. OAE506 0.32 ABIE41_RS15825 transcription-repair coupling factor 0.26 ABIE41_RS23820 phosphoenolpyruvate--protein phosphotransferase low > 77
Rhodospirillum rubrum S1H 0.32 Rru_A1726 Transcription-repair coupling factor (NCBI) 0.23 Rru_A0745 PTSINtr with GAF domain, PtsP (NCBI) 0.59 30
Sinorhizobium meliloti 1021 0.32 SMc04450 transcription-repair coupling factor 0.25 SMc02437 phosphoenolpyruvate phosphotransferase PTSP (enzyme I-Ntr) protein — —
Sphingomonas koreensis DSMZ 15582 0.32 Ga0059261_0960 transcription-repair coupling factor (mfd) 0.23 Ga0059261_2514 phosphoenolpyruvate-protein phosphotransferase low > 68
Caulobacter crescentus NA1000 Δfur 0.32 CCNA_01920 transcription-repair coupling factor Mfd 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 67
Caulobacter crescentus NA1000 0.32 CCNA_01920 transcription-repair coupling factor Mfd 0.25 CCNA_00892 phosphoenolpyruvate-protein phosphotransferase PtsP low > 66
Phaeobacter inhibens DSM 17395 0.31 PGA1_c14920 transcription-repair-coupling factor Mfd 0.21 PGA1_c23500 phosphoenolpyruvate-protein phosphotransferase PtsP low > 62
Dinoroseobacter shibae DFL-12 0.31 Dshi_1561 transcription-repair coupling factor (RefSeq) 0.21 Dshi_2062 PTSINtr with GAF domain, PtsP (RefSeq) low > 64
Agrobacterium fabrum C58 0.31 Atu1778 transcription-repair coupling factor 0.25 Atu4173 phosphoenolpyruvate-protein phosphotransferase low > 89
Rhizobium sp. OAE497 0.31 ABIE40_RS09310 transcription-repair coupling factor 0.24 ABIE40_RS17300 phosphoenolpyruvate--protein phosphotransferase — —

Not shown: 28 genomes with orthologs for NOLOHH_20995 only; 2 genomes with orthologs for NOLOHH_11890 only