Conservation of cofitness between MIT1002_03473 and MIT1002_03978 in Alteromonas macleodii MIT1002

57 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Alteromonas macleodii MIT1002 1.0 MIT1002_03473 5-keto-D-gluconate transporter 1.0 MIT1002_03978 General secretion pathway protein F 0.51 10
Erwinia amylovora T8 0.36 OLJFJH_04270 gluconate transporter 0.44 OLJFJH_01120 type II secretion system inner membrane protein GspF low > 58
Pseudomonas putida KT2440 0.36 PP_3417 D-gluconate transporter 0.31 PP_1048 putative protein secretion protein for export low > 96
Pseudomonas sp. SVBP6 0.36 COO64_RS25580 GntP family permease 0.30 COO64_RS04785 gspF type II secretion system inner membrane protein GspF low > 93
Cupriavidus basilensis FW507-4G11 0.36 RR42_RS28835 gluconate:H+ symporter (gntT) (from data) 0.36 RR42_RS19530 general secretion pathway protein GspF low > 128
Pseudomonas sp. BP01 0.36 JOY50_RS23615 GntP family permease 0.31 JOY50_RS11580 gspF type II secretion system inner membrane protein GspF — —
Enterobacter sp. TBS_079 0.36 MPMX20_04302 High-affinity gluconate transporter 0.43 MPMX20_01517 Putative type II secretion system protein F low > 85
Dickeya dianthicola ME23 0.35 DZA65_RS20960 gluconate transporter 0.56 DZA65_RS15670 type II secretion system inner membrane protein GspF low > 75
Enterobacter asburiae PDN3 0.35 EX28DRAFT_4127 gluconate transporter 0.42 EX28DRAFT_2077 type II secretion system protein F low > 76
Dickeya dadantii 3937 0.35 DDA3937_RS19775 gluconate transporter 0.56 DDA3937_RS14790 type II secretion system inner membrane protein GspF low > 74
Dickeya dianthicola 67-19 0.35 HGI48_RS19890 gluconate transporter 0.56 HGI48_RS14725 type II secretion system inner membrane protein GspF low > 71
Klebsiella michiganensis M5al 0.35 BWI76_RS26235 gluconate transporter 0.50 BWI76_RS05080 type II secretion protein F low > 92
Escherichia coli BL21 0.35 ECD_04131 L-idonate and D-gluconate transporter 0.50 ECD_02836 putative type II secretion protein GspF low > 61
Escherichia coli ECOR38 0.35 HEPCGN_09955 idnT gnt-II system L-idonate transporter 0.50 HEPCGN_18060 gspF general secretion pathway protein F low > 88
Escherichia fergusonii Becca 0.35 EFB2_04270 Gnt-II system L-idonate transporter 0.50 EFB2_00847 Type II secretion system protein F low > 86
Ralstonia solanacearum IBSBF1503 0.35 RALBFv3_RS18165 permease 0.38 RALBFv3_RS07755 type II secretion system protein GspF low > 76
Escherichia coli ECOR27 0.35 NOLOHH_04030 idnT gnt-II system L-idonate transporter 0.51 NOLOHH_10985 gspF general secretion pathway protein F low > 76
Escherichia coli BW25113 0.35 b4265 idnT L-idonate and D-gluconate transporter (NCBI) 0.43 b3327 gspF general secretory pathway component, cryptic (NCBI) low > 76
Ralstonia solanacearum UW163 0.35 UW163_RS20965 permease 0.38 UW163_RS05870 type II secretion system protein GspF — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.35 OHPLBJKB_03771 Gnt-II system L-idonate transporter 0.51 OHPLBJKB_00741 Type II secretion system protein F low > 74
Ralstonia solanacearum GMI1000 0.35 RS_RS22870 permease 0.38 RS_RS15650 type II secretion system protein GspF low > 80
Ralstonia solanacearum PSI07 0.35 RPSI07_RS05470 permease 0.38 RPSI07_RS09505 type II secretion system protein GspF 0.56 67
Pseudomonas aeruginosa PUPa3 0.35 DQ20_RS59240 GntP family permease 0.48 DQ20_RS34140 xcpS;inference=COORDINATES GspF family T2SS innner membrane protein variant XcpS low > 101
Pseudomonas aeruginosa PA14 0.35 IKLFDK_11385 Gluconate permease 0.48 IKLFDK_15785 GspF family T2SS innner membrane protein variant XcpS low > 98
Pseudomonas aeruginosa MRSN321 0.35 DY961_RS18000 GntP family permease 0.48 DY961_RS01415 xcpS;inference=COORDINATES GspF family T2SS innner membrane protein variant XcpS low > 100
Ralstonia sp. UNC404CL21Col 0.35 ABZR87_RS19095 gluconate:H+ symporter 0.38 ABZR87_RS03460 type II secretion system inner membrane protein GspF low > 80
Pseudomonas fluorescens FW300-N2E3 0.35 AO353_25205 permease DsdX 0.40 AO353_12555 type II secretion system protein GspF low > 101
Escherichia coli ECRC100 0.34 OKFHMN_16845 gntU gluconate transporter 0.53 OKFHMN_00275 gspF type II secretion system inner membrane protein GspF low > 79
Escherichia coli ECRC98 0.34 JDDGAC_20475 gntU gluconate transporter 0.53 JDDGAC_30305 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli ECRC102 0.34 NIAGMN_14615 gntU gluconate transporter 0.53 NIAGMN_28595 gspF type II secretion system inner membrane protein GspF 0.53 44
Rahnella sp. WP5 0.34 EX31_RS16635 gluconate transporter 0.44 EX31_RS16175 type II secretion system inner membrane protein GspF low > 89
Escherichia coli ECRC101 0.34 MCAODC_07375 gntU gluconate transporter 0.53 MCAODC_15275 gspF type II secretion system inner membrane protein GspF low > 87
Escherichia coli Nissle 1917 0.34 ECOLIN_RS19665 gluconate transporter 0.50 ECOLIN_RS17075 type II secretion system inner membrane protein GspF low > 55
Pseudomonas fluorescens GW456-L13 0.34 PfGW456L13_1927 Gluconate permease 0.44 PfGW456L13_264 General secretion pathway protein F low > 87
Paraburkholderia sabiae LMG 24235 0.34 QEN71_RS26910 GntP family permease 0.40 QEN71_RS29520 type II secretion system inner membrane protein GspF low > 153
Pseudomonas fluorescens SBW25-INTG 0.34 PFLU_RS23585 GntP family permease 0.35 PFLU_RS15740 type II secretion system protein GspF low > 109
Pseudomonas fluorescens SBW25 0.34 PFLU_RS23585 GntP family permease 0.35 PFLU_RS15740 type II secretion system protein GspF low > 109
Pseudomonas simiae WCS417 0.34 PS417_21980 permease DsdX 0.35 PS417_11305 general secretion pathway protein GspF low > 88
Erwinia tracheiphila SCR3 0.34 LU632_RS19170 gntU gluconate transporter 0.39 LU632_RS25240 gspF type II secretion system inner membrane protein GspF low > 73
Erwinia tracheiphila HP pepo 2.2 0.34 IJEDHG_08030 gntU gluconate transporter 0.39 IJEDHG_09700 gspF type II secretion system inner membrane protein GspF low > 61
Klebsiella pneumoniae MKP103 0.34 KDGMDA_07030 gluconate transporter 0.51 KDGMDA_13335 type II secretion system inner membrane protein GspF low > 95
Pseudomonas fluorescens FW300-N2C3 0.34 AO356_05055 permease DsdX 0.39 AO356_09335 type II secretion system protein GspF low > 104
Sphingomonas koreensis DSMZ 15582 0.34 Ga0059261_1667 gluconate permease GntT (TC 2.A.8.1.4) 0.37 Ga0059261_3953 Type II secretory pathway, component PulF low > 68
Pseudomonas sp. RS175 0.34 PFR28_00595 High-affinity gluconate transporter 0.36 PFR28_01752 Type II secretion system protein F low > 88
Pseudomonas sp. DMC3 0.34 GFF4936 High-affinity gluconate transporter 0.36 GFF2987 Type II secretion system protein F low > 89
Pseudomonas fluorescens FW300-N2E2 0.34 Pf6N2E2_2863 Gluconate permease 0.38 Pf6N2E2_3744 General secretion pathway protein F low > 103
Paraburkholderia bryophila 376MFSha3.1 0.34 H281DRAFT_04276 gluconate permease GntT 0.42 H281DRAFT_02354 general secretion pathway protein F low > 103
Burkholderia phytofirmans PsJN 0.33 BPHYT_RS16725 gluconate:H+ symporter (gntT) (from data) 0.43 BPHYT_RS19605 general secretion pathway protein F low > 109
Paraburkholderia graminis OAS925 0.33 ABIE53_003515 GntP family gluconate:H+ symporter 0.42 ABIE53_000298 general secretion pathway protein F low > 113
Acinetobacter baumannii LAC-4 0.31 RR41_RS16520 gluconate:H+ symporter 0.42 RR41_RS17145 type II secretion system inner membrane protein GspF low > 55
Acidovorax sp. GW101-3H11 0.31 Ac3H11_3740 Gluconate permease 0.34 Ac3H11_4054 General secretion pathway protein F / Type II secretory pathway, component PulF low > 79
Variovorax sp. SCN45 0.28 GFF1885 Gluconate transporter family protein 0.37 GFF102 General secretion pathway protein F low > 127
Pectobacterium carotovorum WPP14 0.28 HER17_RS01460 GntP family permease 0.54 HER17_RS06695 type II secretion system inner membrane protein GspF low > 75
Vibrio cholerae E7946 ATCC 55056 0.28 CSW01_01470 permease 0.60 CSW01_13780 type II secretion system protein GspF — —
Sphingobium sp. HT1-2 0.24 GFF1926 Gluconate transporter family protein 0.32 GFF3517 General secretion pathway protein F low > 95
Shewanella loihica PV-4 0.21 Shew_2533 gluconate transporter (RefSeq) 0.61 Shew_3617 general secretion pathway protein F (RefSeq) low > 60
Shewanella oneidensis MR-1 0.18 SO1771 permease, GntP family (NCBI ptt file) 0.60 SO0168 gspF general secretion pathway protein F (NCBI ptt file) low > 76
Shewanella sp. ANA-3 0.17 Shewana3_2684 gluconate transporter (RefSeq) 0.62 Shewana3_0153 general secretion pathway protein F (RefSeq) low > 73

Not shown: 19 genomes with orthologs for MIT1002_03473 only; 14 genomes with orthologs for MIT1002_03978 only