Conservation of cofitness between LRK54_RS07245 and LRK54_RS10515 in Rhodanobacter denitrificans FW104-10B01

44 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Rhodanobacter denitrificans FW104-10B01 1.0 LRK54_RS07245 transglycosylase SLT domain-containing protein 1.0 LRK54_RS10515 aldo/keto reductase 0.56 6
Rhodanobacter denitrificans MT42 1.00 LRK55_RS06980 transglycosylase SLT domain-containing protein 1.00 LRK55_RS10155 aldo/keto reductase low > 63
Rhodanobacter sp000427505 FW510-R12 0.84 LRK53_RS01145 transglycosylase SLT domain-containing protein 0.89 LRK53_RS03335 aldo/keto reductase low > 60
Rhodanobacter sp. FW510-T8 0.78 OKGIIK_16395 Lytic transglycosylase 0.93 OKGIIK_13390 aldo/keto reductase low > 52
Dyella japonica UNC79MFTsu3.2 0.65 ABZR86_RS12745 transglycosylase SLT domain-containing protein 0.80 ABZR86_RS16200 aldo/keto reductase low > 74
Xanthomonas campestris pv. campestris strain 8004 0.31 Xcc-8004.961.1 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.70 Xcc-8004.4648.1 Oxidoreductase low > 74
Lysobacter sp. OAE881 0.30 ABIE51_RS19070 transglycosylase SLT domain-containing protein 0.58 ABIE51_RS11290 aldo/keto reductase low > 62
Pseudomonas stutzeri RCH2 0.23 Psest_1844 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 0.15 Psest_0856 Predicted oxidoreductase low > 67
Pseudomonas fluorescens FW300-N2E2 0.21 Pf6N2E2_2294 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.65 Pf6N2E2_1615 Aldo-keto reductase low > 103
Pseudomonas aeruginosa PA14 0.21 IKLFDK_15365 lytic transglycosylase Slt 0.70 IKLFDK_12460 aldo/keto reductase low > 101
Pseudomonas fluorescens FW300-N2E3 0.21 AO353_00530 lytic transglycosylase 0.71 AO353_23805 aldo/keto reductase low > 101
Pseudomonas fluorescens GW456-L13 0.21 PfGW456L13_4045 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.64 PfGW456L13_2966 Aldo-keto reductase low > 87
Pseudomonas simiae WCS417 0.21 PS417_07550 lytic transglycosylase 0.69 PS417_14445 aldo/keto reductase low > 88
Pseudomonas fluorescens SBW25-INTG 0.21 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.69 PFLU_RS16375 aldo/keto reductase low > 109
Pseudomonas fluorescens FW300-N2C3 0.21 AO356_02350 lytic transglycosylase 0.64 AO356_23370 aldo/keto reductase low > 104
Pseudomonas fluorescens SBW25 0.21 PFLU_RS07630 transglycosylase SLT domain-containing protein 0.69 PFLU_RS16375 aldo/keto reductase low > 109
Pseudomonas fluorescens FW300-N1B4 0.20 Pf1N1B4_3898 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.70 Pf1N1B4_4693 Oxidoreductase low > 87
Pseudomonas sp. RS175 0.20 PFR28_01106 Soluble lytic murein transglycosylase 0.60 PFR28_02364 Aldo-keto reductase YhdN low > 88
Pseudomonas sp. SVBP6 0.20 COO64_RS09370 transglycosylase SLT domain-containing protein 0.22 COO64_RS11230 aldo/keto reductase low > 93
Pseudomonas syringae pv. syringae B728a ΔmexB 0.20 Psyr_3295 SLT 0.65 Psyr_2519 Aldo/keto reductase low > 86
Pseudomonas syringae pv. syringae B728a 0.20 Psyr_3295 SLT 0.65 Psyr_2519 Aldo/keto reductase low > 86
Serratia liquefaciens MT49 0.18 IAI46_02985 murein transglycosylase 0.69 IAI46_02855 aldo/keto reductase low > 86
Dickeya dianthicola 67-19 0.18 HGI48_RS18385 murein transglycosylase 0.68 HGI48_RS03345 aldo/keto reductase low > 71
Dickeya dadantii 3937 0.17 DDA3937_RS18455 murein transglycosylase 0.65 DDA3937_RS03195 aldo/keto reductase low > 74
Dickeya dianthicola ME23 0.17 DZA65_RS19525 murein transglycosylase 0.64 DZA65_RS03390 aldo/keto reductase low > 75
Pectobacterium carotovorum WPP14 0.17 HER17_RS02750 murein transglycosylase 0.69 HER17_RS18075 aldo/keto reductase low > 75
Pantoea sp. MT58 0.17 IAI47_16260 murein transglycosylase 0.43 IAI47_08360 aldo/keto reductase low > 76
Escherichia fergusonii Becca 0.17 EFB2_04052 Soluble lytic murein transglycosylase 0.44 EFB2_03742 Aldo-keto reductase IolS low > 86
Escherichia coli ECOR38 0.17 HEPCGN_09175 sltY murein transglycosylase 0.44 HEPCGN_07675 pdxI aldo/keto reductase low > 87
Escherichia coli Nissle 1917 0.16 ECOLIN_RS25210 murein transglycosylase 0.44 ECOLIN_RS26205 aldo/keto reductase — —
Enterobacter sp. TBS_079 0.16 MPMX20_00699 Soluble lytic murein transglycosylase 0.41 MPMX20_00046 Aldo-keto reductase IolS low > 85
Klebsiella michiganensis M5al 0.16 BWI76_RS04185 murein transglycosylase 0.33 BWI76_RS21735 aldehyde oxidase low > 92
Rahnella sp. WP5 0.16 EX31_RS03985 murein transglycosylase 0.61 EX31_RS04125 aldo/keto reductase low > 89
Paraburkholderia sabiae LMG 24235 0.16 QEN71_RS28635 lytic transglycosylase domain-containing protein 0.44 QEN71_RS08125 aldo/keto reductase low > 153
Ralstonia sp. UNC404CL21Col 0.15 ABZR87_RS04885 lytic transglycosylase domain-containing protein 0.24 ABZR87_RS04135 aldo/keto reductase low > 80
Ralstonia solanacearum PSI07 0.15 RPSI07_RS23510 lytic transglycosylase 0.40 RPSI07_RS00620 aldo/keto reductase low > 81
Ralstonia solanacearum UW163 0.15 UW163_RS03720 lytic transglycosylase 0.41 UW163_RS23080 aldo/keto reductase — —
Ralstonia solanacearum IBSBF1503 0.15 RALBFv3_RS09860 lytic transglycosylase 0.41 RALBFv3_RS22535 aldo/keto reductase low > 76
Ralstonia solanacearum GMI1000 0.14 RS_RS00445 lytic transglycosylase 0.46 RS_RS01075 aldo/keto reductase low > 80
Herbaspirillum seropedicae SmR1 0.14 HSERO_RS21415 lytic transglycosylase 0.67 HSERO_RS16785 aldo/keto reductase low > 78
Cupriavidus basilensis FW507-4G11 0.14 RR42_RS01405 lytic transglycosylase 0.67 RR42_RS20325 aldo/keto reductase low > 128
Hydrogenophaga sp. GW460-11-11-14-LB1 0.13 GFF1614 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.42 GFF3816 Aldo-keto reductase low > 90
Acidovorax sp. GW101-3H11 0.13 Ac3H11_1834 Soluble lytic murein transglycosylase precursor (EC 3.2.1.-) 0.43 Ac3H11_4133 Aldo-keto reductase low > 79
Variovorax sp. OAS795 0.13 ABID97_RS06595 transglycosylase SLT domain-containing protein 0.47 ABID97_RS21725 aldo/keto reductase 0.30 45
Variovorax sp. SCN45 0.12 GFF5163 Soluble lytic murein transglycosylase (EC 4.2.2.n1) 0.45 GFF3107 Oxidoreductase, aldo/keto reductase family low > 127

Not shown: 31 genomes with orthologs for LRK54_RS07245 only; 24 genomes with orthologs for LRK54_RS10515 only