Conservation of cofitness between JDDGAC_25110 and JDDGAC_10725 in Escherichia coli ECRC98

55 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Escherichia coli ECRC98 1.0 JDDGAC_25110 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.0 JDDGAC_10725 kdpD two-component system sensor histidine kinase KdpD 0.63 11
Escherichia coli ECRC101 1.00 MCAODC_11975 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 MCAODC_26290 kdpD two-component system sensor histidine kinase KdpD low > 87
Escherichia coli ECOR38 1.00 HEPCGN_20590 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 HEPCGN_01160 kdpD two-component system sensor histidine kinase KdpD low > 87
Escherichia coli ECRC102 1.00 NIAGMN_19215 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NIAGMN_05130 kdpD two-component system sensor histidine kinase KdpD
Escherichia coli ECRC99 1.00 KEDOAH_06775 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 KEDOAH_20895 kdpD two-component system sensor histidine kinase KdpD
Escherichia coli ECRC100 1.00 OKFHMN_21445 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 OKFHMN_07075 kdpD two-component system sensor histidine kinase KdpD low > 80
Escherichia coli HS(pFamp)R (ATCC 700891) 1.00 OHPLBJKB_01145 Ferredoxin YfhL 1.00 OHPLBJKB_03022 Sensor protein KdpD low > 73
Escherichia coli ECRC62 0.99 BNILDI_11920 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 BNILDI_21460 kdpD two-component system sensor histidine kinase KdpD low > 75
Escherichia coli ECOR27 0.99 NOLOHH_13120 yfhL 4Fe-4S dicluster ferredoxin YfhL 1.00 NOLOHH_23455 kdpD two-component system sensor histidine kinase KdpD low > 75
Escherichia coli Nissle 1917 0.99 ECOLIN_RS14495 4Fe-4S dicluster ferredoxin YfhL 0.99 ECOLIN_RS03755 two-component system sensor histidine kinase KdpD
Escherichia fergusonii Becca 0.99 EFB2_01334 Ferredoxin YfhL 0.99 EFB2_03401 Sensor protein KdpD low > 86
Escherichia coli BL21 0.99 ECD_02456 putative 4Fe-4S cluster-containing protein 1.00 ECD_00652 fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein low > 61
Escherichia coli BW25113 0.99 b2562 yfhL predicted 4Fe-4S cluster-containing protein (NCBI) 0.99 b0695 kdpD fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein (NCBI) low > 76
Enterobacter asburiae PDN3 0.95 EX28DRAFT_0084 4Fe-4S dicluster domain 0.83 EX28DRAFT_2283 Osmosensitive K+ channel histidine kinase low > 76
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.95 GFF2470 4Fe-4S ferredoxin, iron-sulfur binding 0.88 GFF4607 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 78
Enterobacter sp. TBS_079 0.93 MPMX20_03433 Ferredoxin YfhL 0.83 MPMX20_01338 Sensor protein KdpD low > 85
Klebsiella michiganensis M5al 0.93 BWI76_RS21295 ferredoxin 0.83 BWI76_RS08305 two-component sensor histidine kinase
Serratia liquefaciens MT49 0.84 IAI46_19525 YfhL family 4Fe-4S dicluster ferredoxin 0.68 IAI46_06165 two-component system sensor histidine kinase KdbD low > 86
Pectobacterium carotovorum WPP14 0.83 HER17_RS05840 YfhL family 4Fe-4S dicluster ferredoxin 0.66 HER17_RS15045 two-component system sensor histidine kinase KdpD low > 75
Dickeya dianthicola 67-19 0.81 HGI48_RS15795 YfhL family 4Fe-4S dicluster ferredoxin 0.65 HGI48_RS06415 two-component system sensor histidine kinase KdpD low > 71
Dickeya dadantii 3937 0.81 DDA3937_RS15710 YfhL family 4Fe-4S dicluster ferredoxin 0.65 DDA3937_RS06370 two-component system sensor histidine kinase KdpD low > 74
Dickeya dianthicola ME23 0.80 DZA65_RS16875 YfhL family 4Fe-4S dicluster ferredoxin 0.65 DZA65_RS06760 two-component system sensor histidine kinase KdbD low > 75
Rahnella sp. WP5 0.80 EX31_RS21860 YfhL family 4Fe-4S dicluster ferredoxin 0.68 EX31_RS23335 two-component system sensor histidine kinase KdbD low > 89
Erwinia tracheiphila SCR3 0.78 LU632_RS15360 YfhL family 4Fe-4S dicluster ferredoxin 0.65 LU632_RS00800 kdpD two-component system sensor histidine kinase KdpD
Pantoea sp. MT58 0.76 IAI47_04905 YfhL family 4Fe-4S dicluster ferredoxin 0.66 IAI47_01250 two-component system sensor histidine kinase KdbD low > 76
Cupriavidus basilensis FW507-4G11 0.61 RR42_RS02000 ferredoxin 0.41 RR42_RS00495 histidine kinase
Dechlorosoma suillum PS 0.60 Dsui_1029 hypothetical protein 0.45 Dsui_0272 osmosensitive K+ channel histidine kinase
Ralstonia solanacearum UW163 0.60 UW163_RS02500 4Fe-4S dicluster domain-containing protein 0.40 UW163_RS04465 sensor histidine kinase KdpD
Ralstonia solanacearum PSI07 0.60 RPSI07_RS22220 4Fe-4S dicluster domain-containing protein 0.40 RPSI07_RS08140 sensor histidine kinase KdpD
Ralstonia solanacearum IBSBF1503 0.60 RALBFv3_RS11080 4Fe-4S dicluster domain-containing protein 0.40 RALBFv3_RS09130 sensor histidine kinase KdpD
Acidovorax sp. GW101-3H11 0.59 Ac3H11_4828 Ferredoxin 0.41 Ac3H11_2408 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-) low > 79
Ralstonia sp. UNC404CL21Col 0.58 ABZR87_RS06970 YfhL family 4Fe-4S dicluster ferredoxin 0.39 ABZR87_RS04525 sensor histidine kinase KdpD low > 80
Ralstonia solanacearum GMI1000 0.58 RS_RS01930 4Fe-4S dicluster domain-containing protein 0.40 RS_RS16960 sensor histidine kinase KdpD
Paraburkholderia sabiae LMG 24235 0.58 QEN71_RS01675 YfhL family 4Fe-4S dicluster ferredoxin 0.43 QEN71_RS24345 DUF4118 domain-containing protein low > 153
Pseudomonas syringae pv. syringae B728a ΔmexB 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA
Pseudomonas syringae pv. syringae B728a 0.57 Psyr_4759 4Fe-4S ferredoxin, iron-sulfur binding protein 0.26 Psyr_2050 ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Osmosensitive K+ channel His kinase sensor:UspA
Herbaspirillum seropedicae SmR1 0.57 HSERO_RS20685 ferredoxin 0.39 HSERO_RS18855 sensor protein KdpD
Paraburkholderia bryophila 376MFSha3.1 0.56 H281DRAFT_01943 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I) 0.41 H281DRAFT_04532 two-component system, OmpR family, sensor histidine kinase KdpD low > 103
Paraburkholderia graminis OAS925 0.56 ABIE53_000703 ferredoxin 0.41 ABIE53_001556 two-component system sensor histidine kinase KdpD low > 113
Acinetobacter radioresistens SK82 0.56 MPMX26_00739 Ferredoxin 0.23 MPMX26_02241 Sensor protein KdpD
Burkholderia phytofirmans PsJN 0.55 BPHYT_RS02825 ferredoxin 0.42 BPHYT_RS06460 histidine kinase low > 109
Pseudomonas sp. S08-1 0.54 OH686_14145 Uncharacterized ferredoxin-like protein YfhL 0.27 OH686_01890 Osmosensitive K+ channel histidine kinase KdpD low > 80
Pseudomonas fluorescens FW300-N2E2 0.54 Pf6N2E2_4571 4Fe-4S ferredoxin, iron-sulfur binding 0.27 Pf6N2E2_2491 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Pseudomonas fluorescens FW300-N2C3 0.54 AO356_13280 ferredoxin 0.27 AO356_03300 histidine kinase
Pseudomonas sp. RS175 0.54 PFR28_04270 Ferredoxin 0.27 PFR28_00942 Sensor protein KdpD
Pseudomonas putida KT2440 0.54 PP_5124 putative 4Fe-4S cluster-containing protein 0.25 PP_4158 sensor protein
Pseudomonas simiae WCS417 0.53 PS417_26865 ferredoxin 0.26 PS417_08300 histidine kinase
Pseudomonas fluorescens FW300-N1B4 0.53 Pf1N1B4_2311 4Fe-4S ferredoxin, iron-sulfur binding 0.25 Pf1N1B4_312 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Pseudomonas fluorescens SBW25-INTG 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.26 PFLU_RS08240 sensor histidine kinase KdpD
Pseudomonas fluorescens GW456-L13 0.53 PfGW456L13_980 4Fe-4S ferredoxin, iron-sulfur binding 0.26 PfGW456L13_2204 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)
Pseudomonas fluorescens SBW25 0.53 PFLU_RS28510 YfhL family 4Fe-4S dicluster ferredoxin 0.26 PFLU_RS08240 sensor histidine kinase KdpD low > 109
Pseudomonas fluorescens FW300-N2E3 0.53 AO353_08310 ferredoxin 0.50 AO353_28955 sensor protein KdpD
Variovorax sp. SCN45 0.51 GFF2345 Uncharacterized ferredoxin-like protein YfhL 0.40 GFF3520 Osmosensitive K+ channel histidine kinase KdpD low > 127
Dyella japonica UNC79MFTsu3.2 0.47 ABZR86_RS20005 YfhL family 4Fe-4S dicluster ferredoxin 0.28 ABZR86_RS13210 sensor histidine kinase KdpD low > 74
Rhodopseudomonas palustris CGA009 0.47 TX73_003430 YfhL family 4Fe-4S dicluster ferredoxin 0.31 TX73_015550 sensor histidine kinase KdpD low > 86
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.2157.1 4Fe-4S ferredoxin, iron-sulfur binding 0.25 Xcc-8004.4379.1 Osmosensitive K+ channel histidine kinase KdpD (EC 2.7.3.-)

Not shown: 16 genomes with orthologs for JDDGAC_25110 only; 15 genomes with orthologs for JDDGAC_10725 only