Conservation of cofitness between IAI47_14515 and IAI47_18510 in Pantoea sp. MT58

58 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_14515 multidrug efflux RND transporter permease subunit 1.0 IAI47_18510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.51 12
Erwinia tracheiphila SCR3 0.87 LU632_RS18185 efflux RND transporter permease subunit 0.79 LU632_RS24240 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Rahnella sp. WP5 0.82 EX31_RS22470 multidrug efflux RND transporter permease subunit 0.75 EX31_RS15065 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 89
Enterobacter asburiae PDN3 0.82 EX28DRAFT_2496 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.77 EX28DRAFT_4456 UDP-N-acetylglucosamine 2-epimerase low > 76
Klebsiella michiganensis M5al 0.82 BWI76_RS06775 multidrug efflux RND transporter permease subunit 0.77 BWI76_RS01090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) 0.22 66
Enterobacter sp. TBS_079 0.81 MPMX20_01064 Multidrug efflux pump subunit AcrB 0.73 MPMX20_04487 UDP-N-acetylglucosamine 2-epimerase low > 85
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.81 GFF4379 RND efflux system, inner membrane transporter CmeB 0.74 GFF2887 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 78
Escherichia fergusonii Becca 0.80 EFB2_03596 Multidrug efflux pump subunit AcrB 0.76 EFB2_04853 UDP-N-acetylglucosamine 2-epimerase low > 86
Escherichia coli BW25113 0.80 b0462 acrB multidrug efflux system protein (NCBI) 0.76 b3786 rffE UDP-N-acetyl glucosamine-2-epimerase (NCBI) low > 76
Escherichia coli BL21 0.80 ECD_00413 multidrug efflux system protein 0.76 ECD_03664 UDP-N-acetyl glucosamine-2-epimerase low > 60
Escherichia coli ECOR38 0.80 HEPCGN_06820 acrB efflux RND transporter permease AcrB 0.76 HEPCGN_13280 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 85
Escherichia coli ECOR27 0.80 NOLOHH_01140 acrB efflux RND transporter permease AcrB 0.76 NOLOHH_06705 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 57
Escherichia coli ECRC62 0.80 BNILDI_22555 acrB efflux RND transporter permease AcrB 0.76 BNILDI_04820 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.80 OHPLBJKB_03212 Multidrug efflux pump subunit AcrB 0.76 OHPLBJKB_04268 UDP-N-acetylglucosamine 2-epimerase low > 73
Escherichia coli Nissle 1917 0.80 ECOLIN_RS02750 efflux RND transporter permease AcrB 0.76 ECOLIN_RS21735 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 52
Escherichia coli ECRC101 0.80 OKFHMN_08205 acrB efflux RND transporter permease AcrB 0.76 OKFHMN_14570 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli ECRC101 0.80 MCAODC_27430 acrB efflux RND transporter permease AcrB 0.76 MCAODC_05075 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli ECRC99 0.80 KEDOAH_19760 acrB efflux RND transporter permease AcrB 0.76 KEDOAH_13580 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Escherichia coli ECRC102 0.80 NIAGMN_06260 acrB efflux RND transporter permease AcrB 0.76 NIAGMN_12325 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Dickeya dadantii 3937 0.79 DDA3937_RS05735 multidrug efflux RND transporter permease subunit 0.71 DDA3937_RS20055 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Serratia liquefaciens MT49 0.78 IAI46_05185 multidrug efflux RND transporter permease subunit SdeY 0.76 IAI46_00600 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 86
Dickeya dianthicola ME23 0.77 DZA65_RS06115 multidrug efflux RND transporter permease subunit 0.70 DZA65_RS21245 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Dickeya dianthicola 67-19 0.77 HGI48_RS05790 multidrug efflux RND transporter permease subunit 0.70 HGI48_RS20200 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 71
Pectobacterium carotovorum WPP14 0.77 HER17_RS15740 multidrug efflux RND transporter permease subunit 0.75 HER17_RS01155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 75
Pseudomonas sp. S08-1 0.69 OH686_16050 Multidrug efflux system, inner membrane proton/drug antiporter (RND type) 0.69 OH686_14385 UDP-N-acetylglucosamine 2-epimerase low > 80
Escherichia coli ECRC98 0.69 JDDGAC_19905 mdtF multidrug efflux pump RND permease MdtF 0.76 JDDGAC_18195 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Pseudomonas fluorescens FW300-N2E2 0.69 Pf6N2E2_2824 RND efflux system, inner membrane transporter CmeB 0.49 Pf6N2E2_201 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 103
Pseudomonas fluorescens FW300-N2C3 0.68 AO356_04880 multidrug transporter 0.49 AO356_25630 UDP-N-acetylglucosamine 2-epimerase low > 104
Pseudomonas sp. RS175 0.68 PFR28_00631 putative efflux pump membrane transporter TtgB 0.67 PFR28_00916 UDP-N-acetylglucosamine 2-epimerase low > 88
Pseudomonas putida KT2440 0.68 PP_1385 Probable efflux pump membrane transporter TtgB 0.65 PP_1811 UDP-N-acetylglucosamine-2-epimerase low > 96
Pseudomonas fluorescens FW300-N2E3 0.68 AO353_17295 multidrug transporter 0.48 AO353_01990 UDP-N-acetylglucosamine 2-epimerase low > 101
Pseudomonas syringae pv. syringae B728a 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase low > 86
Pseudomonas syringae pv. syringae B728a ΔmexB 0.68 Psyr_4008 Hydrophobe/amphiphile efflux-1 HAE1 0.53 Psyr_1032 UDP-N-Acetylglucosamine 2-epimerase — —
Pseudomonas simiae WCS417 0.68 PS417_06770 multidrug transporter 0.16 PS417_08175 UDP-N-acetylglucosamine 2-epimerase — —
Pseudomonas fluorescens GW456-L13 0.67 PfGW456L13_4581 RND efflux system, inner membrane transporter CmeB 0.65 PfGW456L13_3995 UDP-N-acetylglucosamine 2-epimerase (EC 5.1.3.14) low > 87
Burkholderia phytofirmans PsJN 0.67 BPHYT_RS16170 multidrug efflux RND transporter permease subunit 0.47 BPHYT_RS21460 UDP-N-acetylglucosamine 2-epimerase — —
Paraburkholderia sabiae LMG 24235 0.67 QEN71_RS02525 efflux RND transporter permease subunit 0.62 QEN71_RS30820 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 153
Paraburkholderia graminis OAS925 0.66 ABIE53_003408 multidrug efflux pump 0.47 ABIE53_001712 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Pseudomonas fluorescens SBW25-INTG 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.17 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 109
Pseudomonas fluorescens SBW25 0.66 PFLU_RS06805 efflux RND transporter permease subunit 0.17 PFLU_RS08155 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 109
Shewanella amazonensis SB2B 0.66 Sama_3554 AcrB/AcrD/AcrF family protein (RefSeq) 0.71 Sama_2261 UDP-N-acetylglucosamine 2-epimerase (RefSeq) — —
Pseudomonas stutzeri RCH2 0.65 Psest_0310 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.58 Psest_0249 UDP-N-acetylglucosamine 2-epimerase low > 67
Rhodospirillum rubrum S1H 0.65 Rru_A2051 Hydrophobe/amphiphile efflux-1 HAE1 (NCBI) 0.41 Rru_A1493 UDP-N-acetylglucosamine 2-epimerase (NCBI) low > 58
Ralstonia solanacearum PSI07 0.65 RPSI07_RS03390 multidrug efflux RND transporter permease subunit 0.64 RPSI07_RS04510 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 81
Ralstonia solanacearum UW163 0.64 UW163_RS19380 multidrug efflux RND transporter permease subunit 0.65 UW163_RS20040 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) — —
Ralstonia solanacearum IBSBF1503 0.64 RALBFv3_RS19795 multidrug efflux RND transporter permease subunit 0.65 RALBFv3_RS19090 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 76
Ralstonia solanacearum GMI1000 0.64 RS_RS21030 multidrug efflux RND transporter permease subunit 0.65 RS_RS22030 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Herbaspirillum seropedicae SmR1 0.64 HSERO_RS06815 multidrug transporter 0.19 HSERO_RS13765 UDP-N-acetylglucosamine 2-epimerase low > 78
Dyella japonica UNC79MFTsu3.2 0.62 ABZR86_RS18285 efflux RND transporter permease subunit 0.38 ABZR86_RS01495 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 74
Acinetobacter radioresistens SK82 0.58 MPMX26_00689 Multidrug resistance protein MexB 0.40 MPMX26_00920 UDP-N-acetylglucosamine 2-epimerase low > 36
Ralstonia sp. UNC404CL21Col 0.55 ABZR87_RS05315 efflux RND transporter permease subunit 0.63 ABZR87_RS21645 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 80
Variovorax sp. OAS795 0.52 ABID97_RS00325 efflux RND transporter permease subunit 0.18 ABID97_RS02160 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 91
Rhodanobacter denitrificans MT42 0.46 LRK55_RS01875 multidrug efflux RND transporter permease subunit 0.18 LRK55_RS12980 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 63
Kangiella aquimarina DSM 16071 0.46 B158DRAFT_0733 The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family 0.68 B158DRAFT_2351 UDP-N-acetylglucosamine 2-epimerase low > 40
Marinobacter adhaerens HP15 0.38 HP15_933 transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 0.67 HP15_2382 UDP-N-acetylglucosamine 2-epimerase low > 73
Pontibacter actiniarum KMM 6156, DSM 19842 0.36 CA264_03655 multidrug efflux RND transporter permease subunit 0.07 CA264_12445 UDP-N-acetylglucosamine 2-epimerase (hydrolyzing) — —
Mucilaginibacter yixingensis YX-36 DSM 26809 0.35 ABZR88_RS03050 efflux RND transporter permease subunit 0.17 ABZR88_RS12760 non-hydrolyzing UDP-N-acetylglucosamine 2-epimerase low > 71
Synechococcus elongatus PCC 7942 0.33 Synpcc7942_2369 acrF Hydrophobe/amphiphile efflux-1 HAE1 0.42 Synpcc7942_0552 nfrC UDP-N-acetylglucosamine 2-epimerase — —
Pedobacter sp. GW460-11-11-14-LB5 0.32 CA265_RS23010 hydrophobe/amphiphile efflux-1 family RND transporter 0.23 CA265_RS19270 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) low > 88

Not shown: 25 genomes with orthologs for IAI47_14515 only; 12 genomes with orthologs for IAI47_18510 only