Conservation of cofitness between IAI47_18010 and IAI47_11975 in Pantoea sp. MT58

49 genomes with putative orthologs of both genes

Organism Ratio1 Gene1 Name1 Description1 Ratio2 Gene2 Name2 Description2 Cofit Rank
Pantoea sp. MT58 1.0 IAI47_18010 malate synthase A 1.0 IAI47_11975 transcription-repair coupling factor 0.46 4
Klebsiella michiganensis M5al 0.75 BWI76_RS01660 malate synthase A 0.82 BWI76_RS11205 transcription-repair coupling factor low > 92
Escherichia coli BW25113 0.74 b4014 aceB malate synthase (NCBI) 0.83 b1114 mfd transcription-repair coupling factor (NCBI) low > 76
Escherichia coli BL21 0.74 ECD_03886 malate synthase A 0.83 ECD_01110 transcription-repair coupling factor low > 60
Escherichia fergusonii Becca 0.74 EFB2_04596 Malate synthase A 0.83 EFB2_02861 Transcription-repair-coupling factor low > 86
Escherichia coli ECOR27 0.74 NOLOHH_05415 aceB malate synthase A 0.83 NOLOHH_20995 mfd transcription-repair coupling factor low > 57
Escherichia coli ECRC62 0.74 BNILDI_06105 aceB malate synthase A 0.83 BNILDI_19160 mfd transcription-repair coupling factor — —
Escherichia coli HS(pFamp)R (ATCC 700891) 0.74 OHPLBJKB_04036 Malate synthase A 0.83 OHPLBJKB_02552 Transcription-repair-coupling factor low > 73
Escherichia coli ECOR38 0.74 HEPCGN_11910 aceB malate synthase A 0.83 HEPCGN_24015 mfd transcription-repair coupling factor low > 85
Escherichia coli ECRC101 0.74 MCAODC_03770 aceB malate synthase A 0.83 MCAODC_22830 mfd transcription-repair coupling factor — —
Escherichia coli ECRC98 0.74 JDDGAC_16895 aceB malate synthase A 0.83 JDDGAC_07130 mfd transcription-repair coupling factor — —
Escherichia coli ECRC102 0.74 NIAGMN_11020 aceB malate synthase A 0.83 NIAGMN_24360 mfd transcription-repair coupling factor — —
Escherichia coli ECRC101 0.74 OKFHMN_13270 aceB malate synthase A 0.83 OKFHMN_03470 mfd transcription-repair coupling factor — —
Serratia liquefaciens MT49 0.74 IAI46_23195 malate synthase A 0.80 IAI46_10320 transcription-repair coupling factor low > 86
Escherichia coli ECRC99 0.74 KEDOAH_14890 aceB malate synthase A 0.83 KEDOAH_24285 mfd transcription-repair coupling factor — —
Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868 0.74 GFF1351 Malate synthase (EC 2.3.3.9) 0.83 GFF3397 Transcription-repair coupling factor low > 78
Enterobacter asburiae PDN3 0.73 EX28DRAFT_4330 malate synthase A 0.83 EX28DRAFT_1816 transcription-repair coupling factor (mfd) low > 76
Pectobacterium carotovorum WPP14 0.73 HER17_RS02290 malate synthase A 0.81 HER17_RS08775 transcription-repair coupling factor low > 75
Enterobacter sp. TBS_079 0.73 MPMX20_00231 Malate synthase A 0.82 MPMX20_01795 Transcription-repair-coupling factor low > 85
Rahnella sp. WP5 0.72 EX31_RS11740 malate synthase A 0.80 EX31_RS24520 transcription-repair coupling factor low > 89
Dickeya dianthicola 67-19 0.72 HGI48_RS19150 malate synthase A 0.79 HGI48_RS13065 transcription-repair coupling factor low > 71
Dickeya dadantii 3937 0.72 DDA3937_RS19060 malate synthase A 0.80 DDA3937_RS13000 transcription-repair coupling factor low > 74
Dickeya dianthicola ME23 0.72 DZA65_RS20270 malate synthase A 0.79 DZA65_RS13530 transcription-repair coupling factor low > 75
Vibrio cholerae E7946 ATCC 55056 0.67 CSW01_03825 malate synthase A 0.64 CSW01_09445 transcription-repair coupling factor low > 62
Shewanella amazonensis SB2B 0.64 Sama_2381 malate synthase (RefSeq) 0.54 Sama_1330 transcription-repair coupling factor (RefSeq) low > 62
Shewanella sp. ANA-3 0.64 Shewana3_2943 malate synthase (RefSeq) 0.56 Shewana3_2289 transcription-repair coupling factor (RefSeq) low > 73
Shewanella oneidensis MR-1 0.64 SO1483 aceB Malate synthase (EC 2.3.3.9) (from data) 0.56 SO2255 mfd transcription-repair coupling factor (NCBI ptt file) low > 76
Shewanella loihica PV-4 0.62 Shew_1275 malate synthase (RefSeq) 0.55 Shew_1630 transcription-repair coupling factor (RefSeq) low > 60
Azospirillum sp. SherDot2 0.50 MPMX19_02139 Malate synthase A 0.31 MPMX19_00876 Transcription-repair-coupling factor 0.41 37
Caulobacter crescentus NA1000 0.49 CCNA_01843 malate synthase 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 66
Caulobacter crescentus NA1000 Δfur 0.49 CCNA_01843 malate synthase 0.32 CCNA_01920 transcription-repair coupling factor Mfd low > 67
Bosea sp. OAE506 0.49 ABIE41_RS09675 malate synthase A 0.32 ABIE41_RS15825 transcription-repair coupling factor low > 77
Rhodanobacter denitrificans FW104-10B01 0.46 LRK54_RS10590 malate synthase A 0.50 LRK54_RS02040 transcription-repair coupling factor low > 59
Rhodanobacter denitrificans MT42 0.46 LRK55_RS10230 malate synthase A 0.50 LRK55_RS01815 transcription-repair coupling factor low > 63
Herbaspirillum seropedicae SmR1 0.46 HSERO_RS15200 malate synthase 0.46 HSERO_RS15180 transcription-repair coupling factor — —
Rhodanobacter sp. FW510-T8 0.46 OKGIIK_13315 aceB malate synthase A 0.49 OKGIIK_09105 mfd transcription-repair coupling factor low > 52
Ralstonia solanacearum UW163 0.46 UW163_RS13500 malate synthase A 0.46 UW163_RS14755 transcription-repair coupling factor — —
Ralstonia solanacearum PSI07 0.46 RPSI07_RS17310 malate synthase A 0.46 RPSI07_RS16040 transcription-repair coupling factor low > 81
Ralstonia solanacearum IBSBF1503 0.46 RALBFv3_RS00170 malate synthase A 0.46 RALBFv3_RS01445 transcription-repair coupling factor low > 76
Ralstonia sp. UNC404CL21Col 0.46 ABZR87_RS11625 malate synthase A 0.46 ABZR87_RS13240 transcription-repair coupling factor low > 80
Cupriavidus basilensis FW507-4G11 0.46 RR42_RS12175 malate synthase 0.45 RR42_RS07845 transcription-repair coupling factor low > 128
Dyella japonica UNC79MFTsu3.2 0.46 ABZR86_RS13485 malate synthase A 0.50 ABZR86_RS21210 transcription-repair coupling factor low > 74
Paraburkholderia graminis OAS925 0.46 ABIE53_002540 malate synthase 0.46 ABIE53_002095 transcription-repair coupling factor (superfamily II helicase) low > 113
Lysobacter sp. OAE881 0.46 ABIE51_RS00195 malate synthase A 0.49 ABIE51_RS14320 transcription-repair coupling factor low > 62
Ralstonia solanacearum GMI1000 0.46 RS_RS06835 malate synthase A 0.46 RS_RS08275 transcription-repair coupling factor low > 80
Xanthomonas campestris pv. campestris strain 8004 0.46 Xcc-8004.310.1 Malate synthase (EC 2.3.3.9) 0.47 Xcc-8004.1775.1 Transcription-repair coupling factor low > 74
Burkholderia phytofirmans PsJN 0.45 BPHYT_RS12305 Malate synthase (EC 2.3.3.9) (from data) 0.46 BPHYT_RS09290 helicase low > 109
Paraburkholderia bryophila 376MFSha3.1 0.45 H281DRAFT_00576 malate synthase 0.46 H281DRAFT_00880 transcription-repair coupling factor low > 103
Paraburkholderia sabiae LMG 24235 0.44 QEN71_RS06250 malate synthase A 0.46 QEN71_RS22060 transcription-repair coupling factor low > 153
Dechlorosoma suillum PS 0.43 Dsui_0019 malate synthase A 0.44 Dsui_2385 transcription-repair coupling factor Mfd low > 51

Not shown: 3 genomes with orthologs for IAI47_18010 only; 38 genomes with orthologs for IAI47_11975 only